Csa7G063930 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G063930
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 3734403 .. 3736031 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAAATTCAGACGAAACTTTGAGGTTAGAATTTTATTTGATTTGTATTAGTTCATACCAGCACAATTCACATGTAGCATGACTTAAATGTAATCAAACATCAAAGTTTCTTCTCAAGTTCAATTCCCTACTACAAAATTGACATTACGTGATGCATGCAACTTTTAATTATTTAAATGTCAAGTAACATGTATCTTTTCCAGAAAAGGTCAAGAATAATAATAAAAAAGCGGAGTTTCACGGAATCTTTCATATATTTTCAAGCTTGCCTAAACTTGACATTTTAAAAAAGTCAAGTAATATCAAGTACACAAACTATATAATATTCTCTATTTTATTTTCCATTATCTCTCATTTTTGTTGAAAAACCCTACCTCCTTTGCGTGAAAGTAGCCACAACACACCCATCCCCCATCATCTTCTTCGATTTTCTCTTTCTCACATTAACTCTTTTTTTTGACCAACTCCTCTCAACGTTGAAAGCAGCCACAACTGCACGATTGTTGCTCTCTCATTCTCTCAACTCTCTCTAGCACTTCCTGCTTGAGTCATTGCTCCTAGGTCTGCGAGTCCACTTGGGGTTTTGAAAGATTTGATGTTCTCAGTCATCTGATGCGAATAGGTGACATGTAGGTTGGGTATTTATGTCTCCACTTAAGGTTTTCATTTTTCCTCTTTTGTTTTACTTTAATTCTAGAGAGAAAAGGGTAGTGTTGTGGGTCTCCTGATCGAGTGAAATTTGTTTTTGACATTGTATTATTTGTAGGTTTTTATAAATTCTACTCATGGGATGCGATAGGCTGTAGCTGTTTAATTTCACAGATGGGAAGCAGGGCAAAGTTTGGAAAGAAATTAATTCATCTATTGAATGTTTCTGTATTCAGTGACAGTTTAATTGTTGTAAATGTAATTCAATTGTGTTATTTTGTGATTTCTTCTCAAATTTGAATGACTAAATTAAATTTATCACCTCTTGCTTTTTTTTTTGATTTATTGATTATGGGTATTTATTTTGGTTTTAGGATCGGAGAGCGAGTAGTTCATTCACGAAGAGGGGTTCAATGATTTACATAAACATTAATTTATAAGAGCAGTTCGGTTATATAGGGATTTGATTCAAGACCTCTTTGAAAGTGAAAATAAAGAGGTTCGTAGCTTTAAAGCCAGATGTGACTTATGCTTCATTTTTTAGTACTATGTAATATGGATAAAGAAAATAACAATTTGTTTCAGAGTGTCCTCACAAACTGGACCAGAATGTGCTGCCCTTCCACCGTGGAACTCCTATGACCCATTTTCTTGGATTAGTTCTAAAGAGTTCCTAACAAATTCAGAGATGATTGCCAATCAGCTTAAATCTAAGGATATGAGGTAGGAAATTCTAACTGGCAGCCAAATTGTTTTTGTAACATTGGTCATTTTTATGATCTAATGGGTGGATTTTCAGCTTTATTGTAATGTAATGAAGGTAGTTGGTGTTTCTTGAGAAATTATTCAGTTAGGCCGCCATGATGTAGTTGGTAATTTTTCACTATTGAAAAGATTTTTGAATTTATATTTTGTAGTTATTAAGTGGCATACAAAGTTTTTGAACTTTCATTGTGCAGGACTCCCATGCACGAGTAG

mRNA sequence

ATGGAAAAATTCAGACGAAACTTTGAGGTCTGCGAGTCCACTTGGGGTTTTGAAAGATTTGATGTTCTCAGTCATCTGATGCGAATAGGTTTTTATAAATTCTACTCATGGGATGCGATAGGCTGTAGCTGTTTAATTTCACAGATGGGAAGCAGGGCAAAGTTTGGAAAGAAATTAATTCATCTATTGAATGTTTCTGTATTCAGTGACAGTTTAATTGTTGTAAATACCTCTTTGAAAGTGAAAATAAAGAGAGTGTCCTCACAAACTGGACCAGAATGTGCTGCCCTTCCACCGTGGAACTCCTATGACCCATTTTCTTGGATTAGTTCTAAAGAGTTCCTAACAAATTCAGAGATGATTGCCAATCAGCTTAAATCTAAGGATATGAGGACTCCCATGCACGAGTAG

Coding sequence (CDS)

ATGGAAAAATTCAGACGAAACTTTGAGGTCTGCGAGTCCACTTGGGGTTTTGAAAGATTTGATGTTCTCAGTCATCTGATGCGAATAGGTTTTTATAAATTCTACTCATGGGATGCGATAGGCTGTAGCTGTTTAATTTCACAGATGGGAAGCAGGGCAAAGTTTGGAAAGAAATTAATTCATCTATTGAATGTTTCTGTATTCAGTGACAGTTTAATTGTTGTAAATACCTCTTTGAAAGTGAAAATAAAGAGAGTGTCCTCACAAACTGGACCAGAATGTGCTGCCCTTCCACCGTGGAACTCCTATGACCCATTTTCTTGGATTAGTTCTAAAGAGTTCCTAACAAATTCAGAGATGATTGCCAATCAGCTTAAATCTAAGGATATGAGGACTCCCATGCACGAGTAG

Protein sequence

MEKFRRNFEVCESTWGFERFDVLSHLMRIGFYKFYSWDAIGCSCLISQMGSRAKFGKKLIHLLNVSVFSDSLIVVNTSLKVKIKRVSSQTGPECAALPPWNSYDPFSWISSKEFLTNSEMIANQLKSKDMRTPMHE*
Homology
[Close]
BLAST of Csa7G063930 vs. TrEMBL
Match: A0A0A0K412_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G063930 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 2.3e-73
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MEKFRRNFEVCESTWGFERFDVLSHLMRIGFYKFYSWDAIGCSCLISQMGSRAKFGKKLI 60
           MEKFRRNFEVCESTWGFERFDVLSHLMRIGFYKFYSWDAIGCSCLISQMGSRAKFGKKLI
Sbjct: 1   MEKFRRNFEVCESTWGFERFDVLSHLMRIGFYKFYSWDAIGCSCLISQMGSRAKFGKKLI 60

Query: 61  HLLNVSVFSDSLIVVNTSLKVKIKRVSSQTGPECAALPPWNSYDPFSWISSKEFLTNSEM 120
           HLLNVSVFSDSLIVVNTSLKVKIKRVSSQTGPECAALPPWNSYDPFSWISSKEFLTNSEM
Sbjct: 61  HLLNVSVFSDSLIVVNTSLKVKIKRVSSQTGPECAALPPWNSYDPFSWISSKEFLTNSEM 120

Query: 121 IANQLKSKDMRTPMHE 137
           IANQLKSKDMRTPMHE
Sbjct: 121 IANQLKSKDMRTPMHE 136

[Close]
BLAST of Csa7G063930 vs. TrEMBL
Match: A0A0A0LK91_CUCSA (Alpha-galactosidase OS=Cucumis sativus GN=Csa_2G349640 PE=3 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.2e-08
Identity = 35/46 (76.09%), Postives = 39/46 (84.78%), Query Frame = 1 

Query: 86  VSSQTGPECAALPP--WNSYDPFSWI-SSKEFLTNSEMIANQLKSK 129
           VSSQTGPE AALPP  WNSYD FSWI S +EFL N+E++ANQLKSK
Sbjct: 19  VSSQTGPERAALPPRGWNSYDSFSWIISEEEFLKNAEIVANQLKSK 64

[Close]
BLAST of Csa7G063930 vs. NCBI nr
Match: gi|700188496|gb|KGN43729.1| (hypothetical protein Csa_7G063930 [Cucumis sativus])

HSP 1 Score: 282.7 bits (722), Expect = 3.4e-73
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MEKFRRNFEVCESTWGFERFDVLSHLMRIGFYKFYSWDAIGCSCLISQMGSRAKFGKKLI 60
           MEKFRRNFEVCESTWGFERFDVLSHLMRIGFYKFYSWDAIGCSCLISQMGSRAKFGKKLI
Sbjct: 1   MEKFRRNFEVCESTWGFERFDVLSHLMRIGFYKFYSWDAIGCSCLISQMGSRAKFGKKLI 60

Query: 61  HLLNVSVFSDSLIVVNTSLKVKIKRVSSQTGPECAALPPWNSYDPFSWISSKEFLTNSEM 120
           HLLNVSVFSDSLIVVNTSLKVKIKRVSSQTGPECAALPPWNSYDPFSWISSKEFLTNSEM
Sbjct: 61  HLLNVSVFSDSLIVVNTSLKVKIKRVSSQTGPECAALPPWNSYDPFSWISSKEFLTNSEM 120

Query: 121 IANQLKSKDMRTPMHE 137
           IANQLKSKDMRTPMHE
Sbjct: 121 IANQLKSKDMRTPMHE 136

[Close]
BLAST of Csa7G063930 vs. NCBI nr
Match: gi|778670580|ref|XP_011649499.1| (PREDICTED: uncharacterized protein LOC101206292 [Cucumis sativus])

HSP 1 Score: 67.8 bits (164), Expect = 1.7e-08
Identity = 35/46 (76.09%), Postives = 39/46 (84.78%), Query Frame = 1 

Query: 86  VSSQTGPECAALPP--WNSYDPFSWI-SSKEFLTNSEMIANQLKSK 129
           VSSQTGPE AALPP  WNSYD FSWI S +EFL N+E++ANQLKSK
Sbjct: 19  VSSQTGPERAALPPRGWNSYDSFSWIISEEEFLKNAEIVANQLKSK 64

[Close]
BLAST of Csa7G063930 vs. NCBI nr
Match: gi|659087306|ref|XP_008444380.1| (PREDICTED: uncharacterized protein LOC103487727 [Cucumis melo])

HSP 1 Score: 65.5 bits (158), Expect = 8.4e-08
Identity = 34/46 (73.91%), Postives = 38/46 (82.61%), Query Frame = 1 

Query: 86  VSSQTGPECAALPP--WNSYDPFSWI-SSKEFLTNSEMIANQLKSK 129
           VSSQTGPE AALPP  WNSYD FSWI S +EFL N E++AN+LKSK
Sbjct: 19  VSSQTGPERAALPPRGWNSYDSFSWIISEEEFLNNVEIVANKLKSK 64

The following BLAST results are available for this feature:
BLAST of Csa7G063930 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K412_CUCSA2.3e-73100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G063930 PE=4 SV=1[more]
A0A0A0LK91_CUCSA1.2e-0876.09Alpha-galactosidase OS=Cucumis sativus GN=Csa_2G349640 PE=3 SV=1[more]
BLAST of Csa7G063930 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188496|gb|KGN43729.1|3.4e-73100.00hypothetical protein Csa_7G063930 [Cucumis sativus][more]
gi|778670580|ref|XP_011649499.1|1.7e-0876.09PREDICTED: uncharacterized protein LOC101206292 [Cucumis sativus][more]
gi|659087306|ref|XP_008444380.1|8.4e-0873.91PREDICTED: uncharacterized protein LOC103487727 [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G063930.1Csa7G063930.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa7G063930CSPI07G05620Wild cucumber (PI 183967)cpicuB354
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G063930Melon (DHL92) v3.6.1cumedB509
Csa7G063930Silver-seed gourdcarcuB0399
Csa7G063930Watermelon (97103) v2cuwmbB558
Csa7G063930Wax gourdcuwgoB661
Csa7G063930Cucumber (Gy14) v1cgycuB322
Csa7G063930Cucurbita maxima (Rimu)cmacuB146
Csa7G063930Cucurbita maxima (Rimu)cmacuB528
Csa7G063930Cucurbita moschata (Rifu)cmocuB138
Csa7G063930Cucurbita moschata (Rifu)cmocuB519
Csa7G063930Cucurbita moschata (Rifu)cmocuB523
Csa7G063930Melon (DHL92) v3.5.1cumeB530
Csa7G063930Watermelon (Charleston Gray)cuwcgB514
Csa7G063930Watermelon (97103) v1cuwmB557
Csa7G063930Cucurbita pepo (Zucchini)cpecuB695
Csa7G063930Bottle gourd (USVL1VR-Ls)culsiB522
Csa7G063930Cucumber (Gy14) v2cgybcuB324