Csa7G058570 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G058570
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 3432080 .. 3432436 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGATTTTGATGAGTTTTCCAGGATCCTCCACAACAGAGTATCCTTCCCATTTCAACGTTCCCCAAACGAGGTCCCCTTCATTGAAATCCGAGTGGGCAGACCCCAAAACTTTGGCTACTCCGTTGACATATTACTCCTTTGGGAAGCCACTGACATAATCTCGGAAAATCACCGGTTTGTTCCTCACTTCGTCGCCGATATGCACCATTGCACCTTTCCTATTGGCAGTCAGTGCGTCAAATTTGATACCGCCGAAGCGTCATCGTATCTGTCTATAAGCTATGAAATGATTGTGAAAAATGAAAAAGTCTATTTTCTTTTCAAATATACTAAAATGATATTTTACATGTAA

mRNA sequence

ATGGTGGATTTTGATGAGTTTTCCAGGATCCTCCACAACAGAGTATCCTTCCCATTTCAACGTTCCCCAAACGAGGTCCCCTTCATTGAAATCCGAGTGGGCAGACCCCAAAACTTTGGCTACTCCGTTGACATATTACTCCTTTGGGAAGCCACTGACATAATCTCGGAAAATCACCGGTTTGTTCCTCACTTCGTCGCCGATATGCACCATTGCACCTTTCCTATTGGCAGTCAGTGCGTCAAATTTGATACCGCCGAAGCGTCATCGTATCTGTCTATAAGCTATGAAATGATTGTGAAAAATGAAAAAGTCTATTTTCTTTTCAAATATACTAAAATGATATTTTACATGTAA

Coding sequence (CDS)

ATGGTGGATTTTGATGAGTTTTCCAGGATCCTCCACAACAGAGTATCCTTCCCATTTCAACGTTCCCCAAACGAGGTCCCCTTCATTGAAATCCGAGTGGGCAGACCCCAAAACTTTGGCTACTCCGTTGACATATTACTCCTTTGGGAAGCCACTGACATAATCTCGGAAAATCACCGGTTTGTTCCTCACTTCGTCGCCGATATGCACCATTGCACCTTTCCTATTGGCAGTCAGTGCGTCAAATTTGATACCGCCGAAGCGTCATCGTATCTGTCTATAAGCTATGAAATGATTGTGAAAAATGAAAAAGTCTATTTTCTTTTCAAATATACTAAAATGATATTTTACATGTAA

Protein sequence

MVDFDEFSRILHNRVSFPFQRSPNEVPFIEIRVGRPQNFGYSVDILLLWEATDIISENHRFVPHFVADMHHCTFPIGSQCVKFDTAEASSYLSISYEMIVKNEKVYFLFKYTKMIFYM*
Homology
[Close]
BLAST of Csa7G058570 vs. TrEMBL
Match: A0A0A0K2H1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G058570 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 9.5e-63
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 1 

Query: 1   MVDFDEFSRILHNRVSFPFQRSPNEVPFIEIRVGRPQNFGYSVDILLLWEATDIISENHR 60
           MVDFDEFSRILHNRVSFPFQRSPNEVPFIEIRVGRPQNFGYSVDILLLWEATDIISENHR
Sbjct: 1   MVDFDEFSRILHNRVSFPFQRSPNEVPFIEIRVGRPQNFGYSVDILLLWEATDIISENHR 60

Query: 61  FVPHFVADMHHCTFPIGSQCVKFDTAEASSYLSISYEMIVKNEKVYFLFKYTKMIFYM 119
           FVPHFVADMHHCTFPIGSQCVKFDTAEASSYLSISYEMIVKNEKVYFLFKYTKMIFYM
Sbjct: 61  FVPHFVADMHHCTFPIGSQCVKFDTAEASSYLSISYEMIVKNEKVYFLFKYTKMIFYM 118

[Close]
BLAST of Csa7G058570 vs. NCBI nr
Match: gi|700188450|gb|KGN43683.1| (hypothetical protein Csa_7G058570 [Cucumis sativus])

HSP 1 Score: 247.3 bits (630), Expect = 1.4e-62
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 1 

Query: 1   MVDFDEFSRILHNRVSFPFQRSPNEVPFIEIRVGRPQNFGYSVDILLLWEATDIISENHR 60
           MVDFDEFSRILHNRVSFPFQRSPNEVPFIEIRVGRPQNFGYSVDILLLWEATDIISENHR
Sbjct: 1   MVDFDEFSRILHNRVSFPFQRSPNEVPFIEIRVGRPQNFGYSVDILLLWEATDIISENHR 60

Query: 61  FVPHFVADMHHCTFPIGSQCVKFDTAEASSYLSISYEMIVKNEKVYFLFKYTKMIFYM 119
           FVPHFVADMHHCTFPIGSQCVKFDTAEASSYLSISYEMIVKNEKVYFLFKYTKMIFYM
Sbjct: 61  FVPHFVADMHHCTFPIGSQCVKFDTAEASSYLSISYEMIVKNEKVYFLFKYTKMIFYM 118

The following BLAST results are available for this feature:
BLAST of Csa7G058570 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K2H1_CUCSA9.5e-63100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G058570 PE=4 SV=1[more]
BLAST of Csa7G058570 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188450|gb|KGN43683.1|1.4e-62100.00hypothetical protein Csa_7G058570 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G058570.1Csa7G058570.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa7G058570CsGy7G004800Cucumber (Gy14) v2cgybcuB324
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G058570Cucurbita pepo (Zucchini)cpecuB261
Csa7G058570Cucurbita pepo (Zucchini)cpecuB695
Csa7G058570Bottle gourd (USVL1VR-Ls)culsiB522
Csa7G058570Melon (DHL92) v3.6.1cumedB509
Csa7G058570Silver-seed gourdcarcuB0666
Csa7G058570Silver-seed gourdcarcuB0753
Csa7G058570Watermelon (97103) v2cuwmbB558
Csa7G058570Wax gourdcuwgoB661
Csa7G058570Cucumber (Gy14) v1cgycuB486
Csa7G058570Cucurbita maxima (Rimu)cmacuB146
Csa7G058570Cucurbita maxima (Rimu)cmacuB532
Csa7G058570Cucurbita moschata (Rifu)cmocuB138
Csa7G058570Cucurbita moschata (Rifu)cmocuB523
Csa7G058570Melon (DHL92) v3.5.1cumeB530
Csa7G058570Watermelon (Charleston Gray)cuwcgB514
Csa7G058570Watermelon (97103) v1cuwmB561