Csa7G049150 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G049150
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 3089098 .. 3089479 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACAGGGTGTGTACCCGTGGAGAATTTGAAGAATTTCTCTCAGAAATTGAAAAACTTCCTTCACAAAAGTTGAAGAGAATCGAGTACGAAAGGTTCTCGAGGGCTACTGGAGAAGAGCAAATTCAGGAAGGATTGCTTAGGCAGTTTTTCTTTTTTCTTTTTGGTTTAACAGAGCAATTGGATTTTCTGAAATTTGGGATTGCAGGAGGTAATTTGGGAACTCTGACCTATTGAGTAATTTAATTTAAAAGTAGTTAATGAGTTTTGTGGAAGAAATTTTTAGAGGTTTTGAGGTTGGATTGGATGAAATCGAAGCTTAACATCTTGAAAGAAGCTGCTGAAAAATAGAGACACTTGCGGAAAGTTGGTGGGCCGAAGG

mRNA sequence

ATGTACAGGGTGTGTACCCGTGGAGAATTTGAAGAATTTCTCTCAGAAATTGAAAAACTTCCTTCACAAAAGTTGAAGAGAATCGAGTACGAAAGGTTCTCGAGGGCTACTGGAGAAGAGCAAATTCAGGAAGGATTGCTTAGGCAGTTTTTCTTTTTTCTTTTTGGTTTAACAGAGCAATTGGATTTTCTGAAATTTGGGATTGCAGGAGAGGTTTTGAGGTTGGATTGGATGAAATCGAAGCTTAACATCTTGAAAGAAGCTGCTGAAAAATAG

Coding sequence (CDS)

ATGTACAGGGTGTGTACCCGTGGAGAATTTGAAGAATTTCTCTCAGAAATTGAAAAACTTCCTTCACAAAAGTTGAAGAGAATCGAGTACGAAAGGTTCTCGAGGGCTACTGGAGAAGAGCAAATTCAGGAAGGATTGCTTAGGCAGTTTTTCTTTTTTCTTTTTGGTTTAACAGAGCAATTGGATTTTCTGAAATTTGGGATTGCAGGAGAGGTTTTGAGGTTGGATTGGATGAAATCGAAGCTTAACATCTTGAAAGAAGCTGCTGAAAAATAG

Protein sequence

MYRVCTRGEFEEFLSEIEKLPSQKLKRIEYERFSRATGEEQIQEGLLRQFFFFLFGLTEQLDFLKFGIAGEVLRLDWMKSKLNILKEAAEK*
Homology
[Close]
BLAST of Csa7G049150 vs. TrEMBL
Match: A0A0A0K2D6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G049150 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 2.2e-43
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 1 

Query: 1  MYRVCTRGEFEEFLSEIEKLPSQKLKRIEYERFSRATGEEQIQEGLLRQFFFFLFGLTEQ 60
          MYRVCTRGEFEEFLSEIEKLPSQKLKRIEYERFSRATGEEQIQEGLLRQFFFFLFGLTEQ
Sbjct: 1  MYRVCTRGEFEEFLSEIEKLPSQKLKRIEYERFSRATGEEQIQEGLLRQFFFFLFGLTEQ 60

Query: 61 LDFLKFGIAGEVLRLDWMKSKLNILKEAAEK 92
          LDFLKFGIAGEVLRLDWMKSKLNILKEAAEK
Sbjct: 61 LDFLKFGIAGEVLRLDWMKSKLNILKEAAEK 91

[Close]
BLAST of Csa7G049150 vs. NCBI nr
Match: gi|700188400|gb|KGN43633.1| (hypothetical protein Csa_7G049150 [Cucumis sativus])

HSP 1 Score: 182.6 bits (462), Expect = 3.2e-43
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 1 

Query: 1  MYRVCTRGEFEEFLSEIEKLPSQKLKRIEYERFSRATGEEQIQEGLLRQFFFFLFGLTEQ 60
          MYRVCTRGEFEEFLSEIEKLPSQKLKRIEYERFSRATGEEQIQEGLLRQFFFFLFGLTEQ
Sbjct: 1  MYRVCTRGEFEEFLSEIEKLPSQKLKRIEYERFSRATGEEQIQEGLLRQFFFFLFGLTEQ 60

Query: 61 LDFLKFGIAGEVLRLDWMKSKLNILKEAAEK 92
          LDFLKFGIAGEVLRLDWMKSKLNILKEAAEK
Sbjct: 61 LDFLKFGIAGEVLRLDWMKSKLNILKEAAEK 91

The following BLAST results are available for this feature:
BLAST of Csa7G049150 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K2D6_CUCSA2.2e-43100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G049150 PE=4 SV=1[more]
BLAST of Csa7G049150 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188400|gb|KGN43633.1|3.2e-43100.00hypothetical protein Csa_7G049150 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G049150.1Csa7G049150.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa7G049150CSPI07G04810Wild cucumber (PI 183967)cpicuB354
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G049150Wax gourdcuwgoB665
Csa7G049150Wax gourdcuwgoB689
Csa7G049150Cucumber (Chinese Long) v2cucuB045
Csa7G049150Cucumber (Chinese Long) v2cucuB048
Csa7G049150Cucumber (Gy14) v1cgycuB173
Csa7G049150Cucumber (Gy14) v1cgycuB298
Csa7G049150Cucumber (Gy14) v1cgycuB317
Csa7G049150Cucurbita maxima (Rimu)cmacuB147
Csa7G049150Cucurbita maxima (Rimu)cmacuB232
Csa7G049150Cucurbita maxima (Rimu)cmacuB426
Csa7G049150Cucurbita maxima (Rimu)cmacuB527
Csa7G049150Cucurbita maxima (Rimu)cmacuB533
Csa7G049150Cucurbita moschata (Rifu)cmocuB132
Csa7G049150Cucurbita moschata (Rifu)cmocuB217
Csa7G049150Cucurbita moschata (Rifu)cmocuB415
Csa7G049150Cucurbita moschata (Rifu)cmocuB518
Csa7G049150Cucurbita moschata (Rifu)cmocuB524
Csa7G049150Melon (DHL92) v3.5.1cumeB519
Csa7G049150Melon (DHL92) v3.5.1cumeB520
Csa7G049150Melon (DHL92) v3.5.1cumeB530
Csa7G049150Watermelon (Charleston Gray)cuwcgB554
Csa7G049150Watermelon (Charleston Gray)cuwcgB566
Csa7G049150Watermelon (97103) v1cuwmB582
Csa7G049150Watermelon (97103) v1cuwmB584
Csa7G049150Cucurbita pepo (Zucchini)cpecuB257
Csa7G049150Cucurbita pepo (Zucchini)cpecuB262
Csa7G049150Cucurbita pepo (Zucchini)cpecuB527
Csa7G049150Cucurbita pepo (Zucchini)cpecuB690
Csa7G049150Bottle gourd (USVL1VR-Ls)culsiB505
Csa7G049150Bottle gourd (USVL1VR-Ls)culsiB508
Csa7G049150Cucumber (Gy14) v2cgybcuB048
Csa7G049150Cucumber (Gy14) v2cgybcuB324
Csa7G049150Melon (DHL92) v3.6.1cumedB499
Csa7G049150Melon (DHL92) v3.6.1cumedB500
Csa7G049150Melon (DHL92) v3.6.1cumedB509
Csa7G049150Silver-seed gourdcarcuB0739
Csa7G049150Silver-seed gourdcarcuB0891
Csa7G049150Watermelon (97103) v2cuwmbB538
Csa7G049150Watermelon (97103) v2cuwmbB551