Csa7G037640 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G037640
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 2057183 .. 2058216 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAAACAAATCAAGAATCAAAGAGATTACAATATCAAATGCACAACTAAAATCAAGTTTACTTTACTGCACATTATTGATATTCGTGAAAAGTTCAACACCTACATGTAAGTAATTGTTTGAGATTACTGCAAATGAATAAAACAAATCTTACACGAGAAACACGCATGAATGCACAAACATAATTAACTTGTATGTGTATTGGAGACTTTAACCAATTTATTAAAGGATTAACTTTTTAATAATTCGCTTAATACATCTAATTATTTGTACGCTTTTAATTTAAAGATAGAAAAATAGCAAAATAAATTAAAATATTTGAAGTATATCAAATAAATGGCTACAGAAATGAAATGTTTATTAGGAATAGAATAAGAAATTTGGTTAAATTTGTGAGTTTTTTTATATATGTACTTTTATTTTTTAGAAAATATATTATATTTGGGGAAATTTGTAAAAATTTCGAATTGGGATTGGGAAGTTGGGTTACCCGCTTCATTCGGGTTTGCTTCCTTCCATTATTTTTGTGTTCTTCGAACTTCAAAGTCCACCGCGAAAAAACTCGGATACTGAATCCTGCGGATTTTCCTTATATAAATTGCCAAAGCTTCAAATTTTCTACTCCGCTTAAGCTCATGCAGTGCCATTCATCACCGTAATCGCCAATCGTAAGCTTTTGGCTCTTTGAAATCTTGCTGGTTGATCTTAGATTCAATTTCCATGGAGTAAAGCTGTTTATCGATTGTAGAACAAATCCGGAGAAGCCATTTCTTCATTTCTACCTTTATTACTTTATTGGGCCTGTGCAATTTGCCCCAAAGGCGGTCTAAGCTTAAGCTTAACAGAATCGGTTGGAATGCCTTGAATATCGCTACAAACCACAGCGCTGACGTGACGTGGGTTTCGTAACATAATCTTTCACTCTTCTTCTTTTTCTTATAATATGAATGTTATCTACTCTTACAGAGGTTTTAATTGATGGGTGTTTTACATTGTAGGACGTATCTGGTTACTTGGGCGCTCCGTACATGA

mRNA sequence

ATGACAAACAAATCAAGAATCAAAGAGATTACAATATCAAATGCACAACTAAAATCAAGTTTACTTTACTGCACATTATTGATATTCGTGAAAAGTTCAACACCTACATCTCATGCAGTGCCATTCATCACCGTAATCGCCAATCAACAAATCCGGAGAAGCCATTTCTTCATTTCTACCTTTATTACTTTATTGGGCCTGTGCAATTTGCCCCAAAGGCGGTCTAAGCTTAAGCTTAACAGAATCGGTTGGAATGCCTTGAATATCGCTACAAACCACAGCGCTGACGTGACGACGTATCTGGTTACTTGGGCGCTCCGTACATGA

Coding sequence (CDS)

ATGACAAACAAATCAAGAATCAAAGAGATTACAATATCAAATGCACAACTAAAATCAAGTTTACTTTACTGCACATTATTGATATTCGTGAAAAGTTCAACACCTACATCTCATGCAGTGCCATTCATCACCGTAATCGCCAATCAACAAATCCGGAGAAGCCATTTCTTCATTTCTACCTTTATTACTTTATTGGGCCTGTGCAATTTGCCCCAAAGGCGGTCTAAGCTTAAGCTTAACAGAATCGGTTGGAATGCCTTGAATATCGCTACAAACCACAGCGCTGACGTGACGACGTATCTGGTTACTTGGGCGCTCCGTACATGA

Protein sequence

MTNKSRIKEITISNAQLKSSLLYCTLLIFVKSSTPTSHAVPFITVIANQQIRRSHFFISTFITLLGLCNLPQRRSKLKLNRIGWNALNIATNHSADVTTYLVTWALRT*
Homology
[Close]
BLAST of Csa7G037640 vs. TrEMBL
Match: A0A0A0K6M5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G037640 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 3.7e-53
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 1 

Query: 1   MTNKSRIKEITISNAQLKSSLLYCTLLIFVKSSTPTSHAVPFITVIANQQIRRSHFFIST 60
           MTNKSRIKEITISNAQLKSSLLYCTLLIFVKSSTPTSHAVPFITVIANQQIRRSHFFIST
Sbjct: 1   MTNKSRIKEITISNAQLKSSLLYCTLLIFVKSSTPTSHAVPFITVIANQQIRRSHFFIST 60

Query: 61  FITLLGLCNLPQRRSKLKLNRIGWNALNIATNHSADVTTYLVTWALRT 109
           FITLLGLCNLPQRRSKLKLNRIGWNALNIATNHSADVTTYLVTWALRT
Sbjct: 61  FITLLGLCNLPQRRSKLKLNRIGWNALNIATNHSADVTTYLVTWALRT 108

[Close]
BLAST of Csa7G037640 vs. NCBI nr
Match: gi|700188228|gb|KGN43461.1| (hypothetical protein Csa_7G037640 [Cucumis sativus])

HSP 1 Score: 215.3 bits (547), Expect = 5.2e-53
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 1 

Query: 1   MTNKSRIKEITISNAQLKSSLLYCTLLIFVKSSTPTSHAVPFITVIANQQIRRSHFFIST 60
           MTNKSRIKEITISNAQLKSSLLYCTLLIFVKSSTPTSHAVPFITVIANQQIRRSHFFIST
Sbjct: 1   MTNKSRIKEITISNAQLKSSLLYCTLLIFVKSSTPTSHAVPFITVIANQQIRRSHFFIST 60

Query: 61  FITLLGLCNLPQRRSKLKLNRIGWNALNIATNHSADVTTYLVTWALRT 109
           FITLLGLCNLPQRRSKLKLNRIGWNALNIATNHSADVTTYLVTWALRT
Sbjct: 61  FITLLGLCNLPQRRSKLKLNRIGWNALNIATNHSADVTTYLVTWALRT 108

The following BLAST results are available for this feature:
BLAST of Csa7G037640 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6M5_CUCSA3.7e-53100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G037640 PE=4 SV=1[more]
BLAST of Csa7G037640 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188228|gb|KGN43461.1|5.2e-53100.00hypothetical protein Csa_7G037640 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU120061cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G037640.1Csa7G037640.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU120061CU120061transcribed_cluster