Csa7G031680 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G031680
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 1773366 .. 1773776 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCACCTAAGAAAACTTGTCTCTGTTATTGTACGAAAGACAAAGTGGAAATCCAAGTAACTGAAAGCAGCAAAAGCGCTACTTTTGCAAGCCCACGAAAGCGCGCTCTTTTTCTCTCTCTCACCCCCCGGAAAGAAATTACTAAAGTAAAATTGACCCCCCATGGGAATTGTTTTCAAATCAATCTCAAGGAAAACCCTTTCCACAGCAAGTCGGCAGATAGATCAATGCTCAAATGTGCTGTAAGGTTACAGAAAGCAGATCAAAACATTAAGATCACTCAATTAGTGTTGTCCAAATCACTTAATACCTTGAGAGAGACTAAGGTTGAGAGAACGCCGGATCATGCAATCTTTATTCAAGAGAAGATCCTTTTATTAGAAATACTGGGTGACATCCTCTCTGGTTGA

mRNA sequence

ATGCCACCTAAGAAAACTTGTCTCTGTTATTGTACGAAAGACAAAGTGGAAATCCAAGTAACTGAAAGCAGCAAAAGCGCTACTTTTGCAAGCCCACGAAAGCGCGCTCTTTTTCTCTCTCTCACCCCCCGGAAAGAAATTACTAAAGTAAAATTGACCCCCCATGGGAATTGTTTTCAAATCAATCTCAAGGAAAACCCTTTCCACAGCAAGTCGGCAGATAGATCAATGCTCAAATGTGCTGTAAGGTTACAGAAAGCAGATCAAAACATTAAGATCACTCAATTAGTGTTGTCCAAATCACTTAATACCTTGAGAGAGACTAAGGTTGAGAGAACGCCGGATCATGCAATCTTTATTCAAGAGAAGATCCTTTTATTAGAAATACTGGGTGACATCCTCTCTGGTTGA

Coding sequence (CDS)

ATGCCACCTAAGAAAACTTGTCTCTGTTATTGTACGAAAGACAAAGTGGAAATCCAAGTAACTGAAAGCAGCAAAAGCGCTACTTTTGCAAGCCCACGAAAGCGCGCTCTTTTTCTCTCTCTCACCCCCCGGAAAGAAATTACTAAAGTAAAATTGACCCCCCATGGGAATTGTTTTCAAATCAATCTCAAGGAAAACCCTTTCCACAGCAAGTCGGCAGATAGATCAATGCTCAAATGTGCTGTAAGGTTACAGAAAGCAGATCAAAACATTAAGATCACTCAATTAGTGTTGTCCAAATCACTTAATACCTTGAGAGAGACTAAGGTTGAGAGAACGCCGGATCATGCAATCTTTATTCAAGAGAAGATCCTTTTATTAGAAATACTGGGTGACATCCTCTCTGGTTGA

Protein sequence

MPPKKTCLCYCTKDKVEIQVTESSKSATFASPRKRALFLSLTPRKEITKVKLTPHGNCFQINLKENPFHSKSADRSMLKCAVRLQKADQNIKITQLVLSKSLNTLRETKVERTPDHAIFIQEKILLLEILGDILSG*
Homology
[Close]
BLAST of Csa7G031680 vs. TrEMBL
Match: A0A0A0K546_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G031680 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 7.1e-70
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MPPKKTCLCYCTKDKVEIQVTESSKSATFASPRKRALFLSLTPRKEITKVKLTPHGNCFQ 60
           MPPKKTCLCYCTKDKVEIQVTESSKSATFASPRKRALFLSLTPRKEITKVKLTPHGNCFQ
Sbjct: 1   MPPKKTCLCYCTKDKVEIQVTESSKSATFASPRKRALFLSLTPRKEITKVKLTPHGNCFQ 60

Query: 61  INLKENPFHSKSADRSMLKCAVRLQKADQNIKITQLVLSKSLNTLRETKVERTPDHAIFI 120
           INLKENPFHSKSADRSMLKCAVRLQKADQNIKITQLVLSKSLNTLRETKVERTPDHAIFI
Sbjct: 61  INLKENPFHSKSADRSMLKCAVRLQKADQNIKITQLVLSKSLNTLRETKVERTPDHAIFI 120

Query: 121 QEKILLLEILGDILSG 137
           QEKILLLEILGDILSG
Sbjct: 121 QEKILLLEILGDILSG 136

[Close]
BLAST of Csa7G031680 vs. NCBI nr
Match: gi|700188174|gb|KGN43407.1| (hypothetical protein Csa_7G031680 [Cucumis sativus])

HSP 1 Score: 271.2 bits (692), Expect = 1.0e-69
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MPPKKTCLCYCTKDKVEIQVTESSKSATFASPRKRALFLSLTPRKEITKVKLTPHGNCFQ 60
           MPPKKTCLCYCTKDKVEIQVTESSKSATFASPRKRALFLSLTPRKEITKVKLTPHGNCFQ
Sbjct: 1   MPPKKTCLCYCTKDKVEIQVTESSKSATFASPRKRALFLSLTPRKEITKVKLTPHGNCFQ 60

Query: 61  INLKENPFHSKSADRSMLKCAVRLQKADQNIKITQLVLSKSLNTLRETKVERTPDHAIFI 120
           INLKENPFHSKSADRSMLKCAVRLQKADQNIKITQLVLSKSLNTLRETKVERTPDHAIFI
Sbjct: 61  INLKENPFHSKSADRSMLKCAVRLQKADQNIKITQLVLSKSLNTLRETKVERTPDHAIFI 120

Query: 121 QEKILLLEILGDILSG 137
           QEKILLLEILGDILSG
Sbjct: 121 QEKILLLEILGDILSG 136

The following BLAST results are available for this feature:
BLAST of Csa7G031680 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K546_CUCSA7.1e-70100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G031680 PE=4 SV=1[more]
BLAST of Csa7G031680 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188174|gb|KGN43407.1|1.0e-69100.00hypothetical protein Csa_7G031680 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G031680.1Csa7G031680.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa7G031680CSPI07G02660Wild cucumber (PI 183967)cpicuB354
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G031680Melon (DHL92) v3.5.1cumeB530
Csa7G031680Watermelon (Charleston Gray)cuwcgB546
Csa7G031680Watermelon (97103) v1cuwmB604
Csa7G031680Cucurbita pepo (Zucchini)cpecuB257
Csa7G031680Cucurbita pepo (Zucchini)cpecuB298
Csa7G031680Cucurbita pepo (Zucchini)cpecuB690
Csa7G031680Cucurbita pepo (Zucchini)cpecuB697
Csa7G031680Bottle gourd (USVL1VR-Ls)culsiB488
Csa7G031680Bottle gourd (USVL1VR-Ls)culsiB494
Csa7G031680Cucumber (Gy14) v2cgybcuB291
Csa7G031680Cucumber (Gy14) v2cgybcuB324
Csa7G031680Melon (DHL92) v3.6.1cumedB496
Csa7G031680Melon (DHL92) v3.6.1cumedB509
Csa7G031680Silver-seed gourdcarcuB0228
Csa7G031680Silver-seed gourdcarcuB0384
Csa7G031680Silver-seed gourdcarcuB1080
Csa7G031680Silver-seed gourdcarcuB1081
Csa7G031680Watermelon (97103) v2cuwmbB529
Csa7G031680Wax gourdcuwgoB670
Csa7G031680Wax gourdcuwgoB679
Csa7G031680Cucumber (Chinese Long) v2cucuB171
Csa7G031680Cucumber (Gy14) v1cgycuB111
Csa7G031680Cucumber (Gy14) v1cgycuB156
Csa7G031680Cucurbita maxima (Rimu)cmacuB148
Csa7G031680Cucurbita maxima (Rimu)cmacuB527
Csa7G031680Cucurbita maxima (Rimu)cmacuB576
Csa7G031680Cucurbita moschata (Rifu)cmocuB132
Csa7G031680Cucurbita moschata (Rifu)cmocuB140
Csa7G031680Cucurbita moschata (Rifu)cmocuB518
Csa7G031680Cucurbita moschata (Rifu)cmocuB565