Csa7G031580 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G031580
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionRING-H2 finger protein; contains IPR013083 (Zinc finger, RING/FYVE/PHD-type)
LocationChr7 : 1690973 .. 1692623 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAATTAAGATGAACTACTGATCATCAATCTTCTTCAATCTTCTTCAATCTTTACCATCTCTACAATTCCACTCTTTTTCTCCAATTTTTTTCCCTTTTCGATCCTACTCTCTCTTCTATTTTCTCTCTTCTACAGTACTAAAAGCAATTGAAGTAAGTTTTCGTTAATCCCTTTTCCTGTTCATTTCCTTTCTCAAAGAAGTGTTCGCTTTCCTCTAATGGGTTTTGTTTAGTTTCTGAATTTGGTAAAGGAAACGACTCTTTGAGCATTTCAGTTTCATAAATTTCTCTTCTTTTTCACTGGTAGACTCAACTTACTTTGACCACCGGGGGATTATTGTTCTTTATCATGTTTGAGAATGGAGGAGGGTTTCCCATTTTCACTGAAAATTGTGTGGTTTTAATCCCTCAAGAGTGTTTTGTGGAATGTTATGAGGATTTTTTGTTCTTGGGTTTTTAGTCTCTTGAAATTTCTCTTTGTGCCTGGTGGAAGATTTTGTAATTGGATCTTTAACCATAGGGTTTGCTTTTACATAAATCTATTCTTGAATGGTAGGTGGATCATGATTCATGTGATAAATTGTCATTTCATATACTTTAATGGAACTAAATGAACTACCTTCTGTTTTTCCTCAGTTTCTGCTCCTGATCTCTATTGGTTATGGAGATTTCATTAATTAGTTGCTTAGTTCATTTTCTTTCCTGACGATTTGTTCATGAACTTCAGTTATTTATTACATGGTTCATCCAAAATAAAAAGGAGAAAAAGCAAGAGGTTCTTAGTTGTTTGTTTACTTTTGTTTCAGCTCTGTCGTGAAGAAAGGCTTGCTTGCAAATTACAAGCTCTGAATCATTGTGTATTTCTGATCAATCTGCTAGTTTTATTCCTGCTGTACCGACTGAGTTTGTGAAGTTTTCTTTAATCACGATGGGTCTCTCCAGTCTCCCAGCTCCGTCGGAAGGAGTTCTGAACGTGATTCTTGTAAACACTGCTCTATCTATTTCCATGCTCAAGTGCTTTGTACGTTTAATCCTTCACATGGTAGGAATCCGTCTCTCATGGCCATCAACTGTAGTCCCATCACCAGATTCCTTTGAAAGCTCCTCAGAGTTGGGAGATCCCAATTTTGGCTCCTCTTGGAATTACCTTGAGATGTTTCGAAACCGATATCCAAGGATTAGATTTGATAAAGTACAGAGTTCAGGATGCCGTGAACATGACTGCTCGGTCTGTTTAACTCAATTTGAACCTGAATCGGCGATAAATCACTTATCATGTGGCCATCTTTTTCACACAGATTGCTTGGAGAAGTGGCTGGACTACTGGAACATCACATGCCCTCTTTGCAGAACTCCTCTAATGTCTGAAGAAGGGAAATCTTGCTTTTGGTGAGTGTTCGGTGCTACAAATCTAGTTAGGGGAAAACTCATGTACAGCACTAGAGACCAAAGTTTGATGTATGTCCTAGAGACCAAAGTTTTGTCCCTGTAAATACATGTTTATGAAGTTCTACGCTTCTAGTTTCTGGCTTGTGCCTTTAGCTTTTAGGTTTTGAGTTAATGCACTATTATTTCACTTTCTTTGTATATGGAATTCTCTGAGTATGCTAAAAGTTCTTCAGCTTCTGTTTGTTTGATATTAAGGTTGACAC

mRNA sequence

ATGGGTCTCTCCAGTCTCCCAGCTCCGTCGGAAGGAGTTCTGAACGTGATTCTTGTAAACACTGCTCTATCTATTTCCATGCTCAAGTGCTTTGTACGTTTAATCCTTCACATGGTAGGAATCCGTCTCTCATGGCCATCAACTGTAGTCCCATCACCAGATTCCTTTGAAAGCTCCTCAGAGTTGGGAGATCCCAATTTTGGCTCCTCTTGGAATTACCTTGAGATGTTTCGAAACCGATATCCAAGGATTAGATTTGATAAAGTACAGAGTTCAGGATGCCGTGAACATGACTGCTCGGTCTGTTTAACTCAATTTGAACCTGAATCGGCGATAAATCACTTATCATGTGGCCATCTTTTTCACACAGATTGCTTGGAGAAGTGGCTGGACTACTGGAACATCACATGCCCTCTTTGCAGAACTCCTCTAATGTCTGAAGAAGGGAAATCTTGCTTTTGGTGA

Coding sequence (CDS)

ATGGGTCTCTCCAGTCTCCCAGCTCCGTCGGAAGGAGTTCTGAACGTGATTCTTGTAAACACTGCTCTATCTATTTCCATGCTCAAGTGCTTTGTACGTTTAATCCTTCACATGGTAGGAATCCGTCTCTCATGGCCATCAACTGTAGTCCCATCACCAGATTCCTTTGAAAGCTCCTCAGAGTTGGGAGATCCCAATTTTGGCTCCTCTTGGAATTACCTTGAGATGTTTCGAAACCGATATCCAAGGATTAGATTTGATAAAGTACAGAGTTCAGGATGCCGTGAACATGACTGCTCGGTCTGTTTAACTCAATTTGAACCTGAATCGGCGATAAATCACTTATCATGTGGCCATCTTTTTCACACAGATTGCTTGGAGAAGTGGCTGGACTACTGGAACATCACATGCCCTCTTTGCAGAACTCCTCTAATGTCTGAAGAAGGGAAATCTTGCTTTTGGTGA

Protein sequence

MGLSSLPAPSEGVLNVILVNTALSISMLKCFVRLILHMVGIRLSWPSTVVPSPDSFESSSELGDPNFGSSWNYLEMFRNRYPRIRFDKVQSSGCREHDCSVCLTQFEPESAINHLSCGHLFHTDCLEKWLDYWNITCPLCRTPLMSEEGKSCFW*
Homology
[Close]
BLAST of Csa7G031580 vs. Swiss-Prot
Match: XERIC_ARATH (Probable E3 ubiquitin-protein ligase XERICO OS=Arabidopsis thaliana GN=XERICO PE=1 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 6.8e-38
Identity = 87/154 (56.49%), Postives = 106/154 (68.83%), Query Frame = 1 

Query: 1   MGLSSLPAPSEGVLNVILVNTALSISMLKCFVRLILHMVGIRLS----WPSTVVPSPDSF 60
           MGLSSLP PSEG+L VILVNTALSIS++K  VR  L +VGI LS     PS+V  S ++ 
Sbjct: 1   MGLSSLPGPSEGMLCVILVNTALSISIVKGIVRSFLGIVGISLSPSSSSPSSVTVSSEN- 60

Query: 61  ESSSELGDPNFGSSWNYLEMFRNRYPRIRFDKVQSSGCR-----EHDCSVCLTQFEPESA 120
            S+SE  D       +YLE FRNR P +RF+ +    CR     +++CSVCL++F+ +S 
Sbjct: 61  SSTSESFDFRVCQPESYLEEFRNRTPTLRFESL----CRCKKQADNECSVCLSKFQGDSE 120

Query: 121 INHLSCGHLFHTDCLEKWLDYWNITCPLCRTPLM 146
           IN L CGHLFH  CLEKW+DYWNITCPLCRTPL+
Sbjct: 121 INKLKCGHLFHKTCLEKWIDYWNITCPLCRTPLV 149

[Close]
BLAST of Csa7G031580 vs. Swiss-Prot
Match: ATL4_ARATH (E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana GN=ATL4 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.4e-11
Identity = 52/149 (34.90%), Postives = 70/149 (46.98%), Query Frame = 1 

Query: 4   SSLPAPSEGVLNVILVNT-ALSISMLKCFVRLILHMVGIRLSWPSTVVPSPDSFESSSEL 63
           SSL +    VL +IL+    L IS+  CF+   L+    R   P +   S  +  S S  
Sbjct: 19  SSLDSLKPSVLVIILILLMTLLISVSICFLLRCLNRCSHRSVLPLSSSSSVATVTSDSRR 78

Query: 64  GDPNFGSSWNYLEMFRNRYPRIRFDKV--QSSGCREHDCSVCLTQFEPESAINHLS-CGH 123
              +  S         +  P  +F  V  +SS     DC+VCL++FEPE  +  L  C H
Sbjct: 79  FSGHRVSPETERSSVLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCH 138

Query: 124 LFHTDCLEKWLDYWNITCPLCRTPLMSEE 149
            FH DC++ WL   N TCPLCR+PL + E
Sbjct: 139 AFHADCIDIWL-VSNQTCPLCRSPLFASE 166

[Close]
BLAST of Csa7G031580 vs. Swiss-Prot
Match: RHA2A_ARATH (E3 ubiquitin-protein ligase RHA2A OS=Arabidopsis thaliana GN=RHA2A PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 3.9e-09
Identity = 24/51 (47.06%), Postives = 32/51 (62.75%), Query Frame = 1 

Query: 98  DCSVCLTQFEPESAINHLSCGHLFHTDCLEKWLDYWNITCPLCRTPLMSEE 149
           DC VCL++ +    +  L C H+FH  CLE WL  +N TCPLCR+ L+S++
Sbjct: 85  DCVVCLSKLKEGEEVRKLECRHVFHKKCLEGWLHQFNFTCPLCRSALVSDD 135

[Close]
BLAST of Csa7G031580 vs. Swiss-Prot
Match: RHA2B_ARATH (E3 ubiquitin-protein ligase RHA2B OS=Arabidopsis thaliana GN=RHA2B PE=1 SV=2)

HSP 1 Score: 62.0 bits (149), Expect = 6.6e-09
Identity = 23/48 (47.92%), Postives = 29/48 (60.42%), Query Frame = 1 

Query: 98  DCSVCLTQFEPESAINHLSCGHLFHTDCLEKWLDYWNITCPLCRTPLM 146
           DC VCL++ +    +  L C H+FH  CLE WL + N  CPLCR+PL+
Sbjct: 73  DCIVCLSKLKTGEEVRKLDCRHVFHKQCLEGWLQHLNFNCPLCRSPLL 120

[Close]
BLAST of Csa7G031580 vs. Swiss-Prot
Match: ATL18_ARATH (RING-H2 finger protein ATL18 OS=Arabidopsis thaliana GN=ATL18 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.1e-08
Identity = 24/45 (53.33%), Postives = 30/45 (66.67%), Query Frame = 1 

Query: 99  CSVCLTQFEPESAINHLS-CGHLFHTDCLEKWLDYWNITCPLCRT 143
           C +CL +FE E A+ HL  C HLFH +C+E WL   ++TCPLCR+
Sbjct: 62  CPICLVEFEAEDAVTHLPRCAHLFHINCIEPWLLRGHLTCPLCRS 106

[Close]
BLAST of Csa7G031580 vs. TrEMBL
Match: A0A0A0K534_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G031580 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 6.5e-88
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 1 

Query: 1   MGLSSLPAPSEGVLNVILVNTALSISMLKCFVRLILHMVGIRLSWPSTVVPSPDSFESSS 60
           MGLSSLPAPSEGVLNVILVNTALSISMLKCFVRLILHMVGIRLSWPSTVVPSPDSFESSS
Sbjct: 1   MGLSSLPAPSEGVLNVILVNTALSISMLKCFVRLILHMVGIRLSWPSTVVPSPDSFESSS 60

Query: 61  ELGDPNFGSSWNYLEMFRNRYPRIRFDKVQSSGCREHDCSVCLTQFEPESAINHLSCGHL 120
           ELGDPNFGSSWNYLEMFRNRYPRIRFDKVQSSGCREHDCSVCLTQFEPESAINHLSCGHL
Sbjct: 61  ELGDPNFGSSWNYLEMFRNRYPRIRFDKVQSSGCREHDCSVCLTQFEPESAINHLSCGHL 120

Query: 121 FHTDCLEKWLDYWNITCPLCRTPLMSEEGKSCFW 155
           FHTDCLEKWLDYWNITCPLCRTPLMSEEGKSCFW
Sbjct: 121 FHTDCLEKWLDYWNITCPLCRTPLMSEEGKSCFW 154

[Close]
BLAST of Csa7G031580 vs. TrEMBL
Match: A0A0A0K6E0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G031570 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 4.1e-82
Identity = 147/154 (95.45%), Postives = 147/154 (95.45%), Query Frame = 1 

Query: 1   MGLSSLPAPSEGVLNVILVNTALSISMLKCFVRLILHMVGIRLSWPSTVVPSPDSFESSS 60
           MGLSSLPAPSEGVLNVILVNTALSISMLKCFVRLILHMVGI LSW STVVPS DSF SSS
Sbjct: 1   MGLSSLPAPSEGVLNVILVNTALSISMLKCFVRLILHMVGIHLSWSSTVVPSIDSFGSSS 60

Query: 61  ELGDPNFGSSWNYLEMFRNRYPRIRFDKVQSSGCREHDCSVCLTQFEPESAINHLSCGHL 120
           ELGDPNFGSSWNYLEMFRNRYPRIRFDKVQSSGCREHDCSVCLTQFEPESAINHL CGHL
Sbjct: 61  ELGDPNFGSSWNYLEMFRNRYPRIRFDKVQSSGCREHDCSVCLTQFEPESAINHLFCGHL 120

Query: 121 FHTDCLEKWLDYWNITCPLCRTPLMSEEGKSCFW 155
           FHTDCLEKWLDYWNITCPLCRTPLMSEE K CFW
Sbjct: 121 FHTDCLEKWLDYWNITCPLCRTPLMSEEEKFCFW 154

[Close]
BLAST of Csa7G031580 vs. TrEMBL
Match: A0A0A0KAU4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G113550 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.2e-52
Identity = 107/155 (69.03%), Postives = 120/155 (77.42%), Query Frame = 1 

Query: 1   MGLSSLPAPSEGVLNVILVNTALSISMLKCFVRLILHMVGIRLSWPSTVVPSPDSFESSS 60
           MGLSSLPAPSEGVL VILVNTALSIS+ K  VR ILH+VGI LS   T+  SPDS E++ 
Sbjct: 1   MGLSSLPAPSEGVLGVILVNTALSISIFKGIVRSILHVVGIHLSSSPTLPSSPDSMENAP 60

Query: 61  ELGDPNFGSSWNYLEMFRNRYPRIRFDKVQSSGCREHDCSVCLTQFEPESAINHLSCGHL 120
           E  + +   + +Y+E FR+R P I FDKV+S    EHDCSVCLTQFEPES INHLSCGHL
Sbjct: 61  ESIEFHLNPNGSYIEEFRSRIPAILFDKVRSCKWLEHDCSVCLTQFEPESEINHLSCGHL 120

Query: 121 FHTDCLEKWLDYWNITCPLCRTPLMSEEG-KSCFW 155
           FH  CLEKWLDYWN+TCPLCRTPLM EE   SCFW
Sbjct: 121 FHRVCLEKWLDYWNLTCPLCRTPLMPEEDTASCFW 155

[Close]
BLAST of Csa7G031580 vs. TrEMBL
Match: B9IAV8_POPTR (Putative RING zinc finger family protein OS=Populus trichocarpa GN=POPTR_0014s16830g PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 4.9e-51
Identity = 105/154 (68.18%), Postives = 118/154 (76.62%), Query Frame = 1 

Query: 1   MGLSSLPAPSEGVLNVILVNTALSISMLKCFVRLILHMVGIRLSWPSTVVPSPDSFESSS 60
           MGLSSLPAPSEGVL V+LVNTALSIS++K  VR ILH+VGIRLS PS  +PS D+ E + 
Sbjct: 1   MGLSSLPAPSEGVLCVLLVNTALSISIVKGIVRSILHIVGIRLS-PSASLPSSDNAEDTR 60

Query: 61  ELGDPNFGSSWNYLEMFRNRYPRIRFDKVQSSGCREHDCSVCLTQFEPESAINHLSCGHL 120
           E  +       NY+E FR+R P IRF+ V S    EHDCSVCLTQFEPES IN LSCGH+
Sbjct: 61  ESLEFRLSPPENYIEEFRSRMPSIRFNTVCSCEQPEHDCSVCLTQFEPESEINSLSCGHI 120

Query: 121 FHTDCLEKWLDYWNITCPLCRTPLMSEEGKSCFW 155
           FH  CLEKWLDYWNITCPLCRTPL+ EE  SCFW
Sbjct: 121 FHKMCLEKWLDYWNITCPLCRTPLLPEEDASCFW 153

[Close]
BLAST of Csa7G031580 vs. TrEMBL
Match: A0A061DMB3_THECC (RING/U-box superfamily protein, putative OS=Theobroma cacao GN=TCM_002456 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 6.0e-49
Identity = 101/154 (65.58%), Postives = 118/154 (76.62%), Query Frame = 1 

Query: 1   MGLSSLPAPSEGVLNVILVNTALSISMLKCFVRLILHMVGIRLSWPSTVVPSPDSFESSS 60
           MGLSSLPAPSEGVL ++LVNTALSIS++K  +R ILH+VGI LS  S+   + DS E+ S
Sbjct: 1   MGLSSLPAPSEGVLCILLVNTALSISIVKGIIRSILHIVGIHLSSSSS---ASDSVENPS 60

Query: 61  ELGDPNFGSSWNYLEMFRNRYPRIRFDKVQSSGCREHDCSVCLTQFEPESAINHLSCGHL 120
           E  D +  +S +Y++ FR+R P IRFD V S    EHDCSVCLTQFEPES IN LSCGHL
Sbjct: 61  ESFDFHLSTSDSYIDEFRSRTPAIRFDAVCSCKRPEHDCSVCLTQFEPESEINRLSCGHL 120

Query: 121 FHTDCLEKWLDYWNITCPLCRTPLMSEEGKSCFW 155
           FH  CLEKWL YWN+TCPLCRTPL+ EE  SCFW
Sbjct: 121 FHKVCLEKWLKYWNVTCPLCRTPLLPEEEASCFW 151

[Close]
BLAST of Csa7G031580 vs. TAIR10
Match: AT2G04240.1 (AT2G04240.1 RING/U-box superfamily protein)

HSP 1 Score: 158.3 bits (399), Expect = 3.8e-39
Identity = 87/154 (56.49%), Postives = 106/154 (68.83%), Query Frame = 1 

Query: 1   MGLSSLPAPSEGVLNVILVNTALSISMLKCFVRLILHMVGIRLS----WPSTVVPSPDSF 60
           MGLSSLP PSEG+L VILVNTALSIS++K  VR  L +VGI LS     PS+V  S ++ 
Sbjct: 1   MGLSSLPGPSEGMLCVILVNTALSISIVKGIVRSFLGIVGISLSPSSSSPSSVTVSSEN- 60

Query: 61  ESSSELGDPNFGSSWNYLEMFRNRYPRIRFDKVQSSGCR-----EHDCSVCLTQFEPESA 120
            S+SE  D       +YLE FRNR P +RF+ +    CR     +++CSVCL++F+ +S 
Sbjct: 61  SSTSESFDFRVCQPESYLEEFRNRTPTLRFESL----CRCKKQADNECSVCLSKFQGDSE 120

Query: 121 INHLSCGHLFHTDCLEKWLDYWNITCPLCRTPLM 146
           IN L CGHLFH  CLEKW+DYWNITCPLCRTPL+
Sbjct: 121 INKLKCGHLFHKTCLEKWIDYWNITCPLCRTPLV 149

[Close]
BLAST of Csa7G031580 vs. TAIR10
Match: AT1G67856.1 (AT1G67856.1 RING/U-box superfamily protein)

HSP 1 Score: 77.8 bits (190), Expect = 6.6e-15
Identity = 49/150 (32.67%), Postives = 78/150 (52.00%), Query Frame = 1 

Query: 1   MGLSSLPAPSEGVLNVILVNTALSISMLKCFVRLILHMVGIRLSWPSTVVPSPDSFESSS 60
           MG+S  P  SEGV+ ++++NT +S+S++K  VR +++MV            S ++ E+ +
Sbjct: 1   MGISHYPTASEGVMPMLVMNTVVSVSLVKNMVRSVVNMV------------SSETNEARN 60

Query: 61  ELGDPNFGSSWNYLEMFRNRYPRIRFDKV-QSSGCREH----DCSVCLTQFEPESAINH- 120
           +  D +   S       R R     F+ + ++ G R      DC VCL  F+ E  ++  
Sbjct: 61  KEDDQDHEDSKR-----RRRISITHFESLCENRGSRNEREAMDCCVCLCGFKEEEEVSEL 120

Query: 121 LSCGHLFHTDCLEKWLDYWNITCPLCRTPL 145
           +SC H FH+ CL+KW    + TCPLCR+ L
Sbjct: 121 VSCKHYFHSACLDKWFGNNHTTCPLCRSIL 133

[Close]
BLAST of Csa7G031580 vs. TAIR10
Match: AT3G60220.1 (AT3G60220.1 TOXICOS EN LEVADURA 4)

HSP 1 Score: 70.9 bits (172), Expect = 8.0e-13
Identity = 52/149 (34.90%), Postives = 70/149 (46.98%), Query Frame = 1 

Query: 4   SSLPAPSEGVLNVILVNT-ALSISMLKCFVRLILHMVGIRLSWPSTVVPSPDSFESSSEL 63
           SSL +    VL +IL+    L IS+  CF+   L+    R   P +   S  +  S S  
Sbjct: 19  SSLDSLKPSVLVIILILLMTLLISVSICFLLRCLNRCSHRSVLPLSSSSSVATVTSDSRR 78

Query: 64  GDPNFGSSWNYLEMFRNRYPRIRFDKV--QSSGCREHDCSVCLTQFEPESAINHLS-CGH 123
              +  S         +  P  +F  V  +SS     DC+VCL++FEPE  +  L  C H
Sbjct: 79  FSGHRVSPETERSSVLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCH 138

Query: 124 LFHTDCLEKWLDYWNITCPLCRTPLMSEE 149
            FH DC++ WL   N TCPLCR+PL + E
Sbjct: 139 AFHADCIDIWL-VSNQTCPLCRSPLFASE 166

[Close]
BLAST of Csa7G031580 vs. TAIR10
Match: AT3G61460.1 (AT3G61460.1 brassinosteroid-responsive RING-H2)

HSP 1 Score: 70.1 bits (170), Expect = 1.4e-12
Identity = 32/75 (42.67%), Postives = 47/75 (62.67%), Query Frame = 1 

Query: 76  MFRNRYPRIRFDKVQSSG-CREHDCSVCLTQFEPESAINHL-SCGHLFHTDCLEKWLDYW 135
           + R   P I+F+++ +SG     +C+VCL +FE E  I  L +C H+FH  CL++W+D+ 
Sbjct: 70  LIREILPVIKFEELTNSGEDLPENCAVCLYEFEGEQEIRWLRNCRHIFHRSCLDRWMDHD 129

Query: 136 NITCPLCRTPLMSEE 149
             TCPLCRTP + +E
Sbjct: 130 QKTCPLCRTPFVPDE 144

[Close]
BLAST of Csa7G031580 vs. TAIR10
Match: AT1G15100.1 (AT1G15100.1 RING-H2 finger A2A)

HSP 1 Score: 62.8 bits (151), Expect = 2.2e-10
Identity = 24/51 (47.06%), Postives = 32/51 (62.75%), Query Frame = 1 

Query: 98  DCSVCLTQFEPESAINHLSCGHLFHTDCLEKWLDYWNITCPLCRTPLMSEE 149
           DC VCL++ +    +  L C H+FH  CLE WL  +N TCPLCR+ L+S++
Sbjct: 85  DCVVCLSKLKEGEEVRKLECRHVFHKKCLEGWLHQFNFTCPLCRSALVSDD 135

[Close]
BLAST of Csa7G031580 vs. NCBI nr
Match: gi|778723425|ref|XP_004144555.2| (PREDICTED: probable E3 ubiquitin-protein ligase XERICO isoform X2 [Cucumis sativus])

HSP 1 Score: 331.3 bits (848), Expect = 9.3e-88
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 1 

Query: 1   MGLSSLPAPSEGVLNVILVNTALSISMLKCFVRLILHMVGIRLSWPSTVVPSPDSFESSS 60
           MGLSSLPAPSEGVLNVILVNTALSISMLKCFVRLILHMVGIRLSWPSTVVPSPDSFESSS
Sbjct: 1   MGLSSLPAPSEGVLNVILVNTALSISMLKCFVRLILHMVGIRLSWPSTVVPSPDSFESSS 60

Query: 61  ELGDPNFGSSWNYLEMFRNRYPRIRFDKVQSSGCREHDCSVCLTQFEPESAINHLSCGHL 120
           ELGDPNFGSSWNYLEMFRNRYPRIRFDKVQSSGCREHDCSVCLTQFEPESAINHLSCGHL
Sbjct: 61  ELGDPNFGSSWNYLEMFRNRYPRIRFDKVQSSGCREHDCSVCLTQFEPESAINHLSCGHL 120

Query: 121 FHTDCLEKWLDYWNITCPLCRTPLMSEEGKSCFW 155
           FHTDCLEKWLDYWNITCPLCRTPLMSEEGKSCFW
Sbjct: 121 FHTDCLEKWLDYWNITCPLCRTPLMSEEGKSCFW 154

[Close]
BLAST of Csa7G031580 vs. NCBI nr
Match: gi|778723422|ref|XP_011658651.1| (PREDICTED: probable E3 ubiquitin-protein ligase XERICO isoform X1 [Cucumis sativus])

HSP 1 Score: 327.0 bits (837), Expect = 1.8e-86
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 1 

Query: 1   MGLSSLPAPSEGVLNVILVNTALSISMLKCFVRLILHMVGIRLSWPSTVVPSPDSFESSS 60
           MGLSSLPAPSEGVLNVILVNTALSISMLKCFVRLILHMVGIRLSWPSTVVPSPDSFESSS
Sbjct: 1   MGLSSLPAPSEGVLNVILVNTALSISMLKCFVRLILHMVGIRLSWPSTVVPSPDSFESSS 60

Query: 61  ELGDPNFGSSWNYLEMFRNRYPRIRFDKVQSSGCREHDCSVCLTQFEPESAINHLSCGHL 120
           ELGDPNFGSSWNYLEMFRNRYPRIRFDKVQSSGCREHDCSVCLTQFEPESAINHLSCGHL
Sbjct: 61  ELGDPNFGSSWNYLEMFRNRYPRIRFDKVQSSGCREHDCSVCLTQFEPESAINHLSCGHL 120

Query: 121 FHTDCLEKWLDYWNITCPLCRTPLMSEEGKSCF 154
           FHTDCLEKWLDYWNITCPLCRTPLMSEEGKSCF
Sbjct: 121 FHTDCLEKWLDYWNITCPLCRTPLMSEEGKSCF 153

[Close]
BLAST of Csa7G031580 vs. NCBI nr
Match: gi|778723418|ref|XP_011658650.1| (PREDICTED: probable E3 ubiquitin-protein ligase XERICO [Cucumis sativus])

HSP 1 Score: 312.0 bits (798), Expect = 5.9e-82
Identity = 147/154 (95.45%), Postives = 147/154 (95.45%), Query Frame = 1 

Query: 1   MGLSSLPAPSEGVLNVILVNTALSISMLKCFVRLILHMVGIRLSWPSTVVPSPDSFESSS 60
           MGLSSLPAPSEGVLNVILVNTALSISMLKCFVRLILHMVGI LSW STVVPS DSF SSS
Sbjct: 1   MGLSSLPAPSEGVLNVILVNTALSISMLKCFVRLILHMVGIHLSWSSTVVPSIDSFGSSS 60

Query: 61  ELGDPNFGSSWNYLEMFRNRYPRIRFDKVQSSGCREHDCSVCLTQFEPESAINHLSCGHL 120
           ELGDPNFGSSWNYLEMFRNRYPRIRFDKVQSSGCREHDCSVCLTQFEPESAINHL CGHL
Sbjct: 61  ELGDPNFGSSWNYLEMFRNRYPRIRFDKVQSSGCREHDCSVCLTQFEPESAINHLFCGHL 120

Query: 121 FHTDCLEKWLDYWNITCPLCRTPLMSEEGKSCFW 155
           FHTDCLEKWLDYWNITCPLCRTPLMSEE K CFW
Sbjct: 121 FHTDCLEKWLDYWNITCPLCRTPLMSEEEKFCFW 154

[Close]
BLAST of Csa7G031580 vs. NCBI nr
Match: gi|659124198|ref|XP_008462031.1| (PREDICTED: E3 ubiquitin-protein ligase ATL4-like isoform X1 [Cucumis melo])

HSP 1 Score: 308.1 bits (788), Expect = 8.5e-81
Identity = 144/154 (93.51%), Postives = 148/154 (96.10%), Query Frame = 1 

Query: 1   MGLSSLPAPSEGVLNVILVNTALSISMLKCFVRLILHMVGIRLSWPSTVVPSPDSFESSS 60
           MGLSSLPAPSEGVLNVILVNTALSISMLKC VRLILHMVGIRLSWPS+VV S DSFE+SS
Sbjct: 1   MGLSSLPAPSEGVLNVILVNTALSISMLKCIVRLILHMVGIRLSWPSSVVSSTDSFENSS 60

Query: 61  ELGDPNFGSSWNYLEMFRNRYPRIRFDKVQSSGCREHDCSVCLTQFEPESAINHLSCGHL 120
           ELGD NFGSSWNYLEMFRNRYPRIRFDKV+SS CREHDCSVCLTQFEPESAINHLSCGHL
Sbjct: 61  ELGDSNFGSSWNYLEMFRNRYPRIRFDKVKSSDCREHDCSVCLTQFEPESAINHLSCGHL 120

Query: 121 FHTDCLEKWLDYWNITCPLCRTPLMSEEGKSCFW 155
           FHT+CLEKWLDYWNITCPLCRTPLMSEE KSCFW
Sbjct: 121 FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFW 154

[Close]
BLAST of Csa7G031580 vs. NCBI nr
Match: gi|659124200|ref|XP_008462032.1| (PREDICTED: E3 ubiquitin-protein ligase ATL4-like isoform X2 [Cucumis melo])

HSP 1 Score: 303.9 bits (777), Expect = 1.6e-79
Identity = 143/153 (93.46%), Postives = 147/153 (96.08%), Query Frame = 1 

Query: 1   MGLSSLPAPSEGVLNVILVNTALSISMLKCFVRLILHMVGIRLSWPSTVVPSPDSFESSS 60
           MGLSSLPAPSEGVLNVILVNTALSISMLKC VRLILHMVGIRLSWPS+VV S DSFE+SS
Sbjct: 1   MGLSSLPAPSEGVLNVILVNTALSISMLKCIVRLILHMVGIRLSWPSSVVSSTDSFENSS 60

Query: 61  ELGDPNFGSSWNYLEMFRNRYPRIRFDKVQSSGCREHDCSVCLTQFEPESAINHLSCGHL 120
           ELGD NFGSSWNYLEMFRNRYPRIRFDKV+SS CREHDCSVCLTQFEPESAINHLSCGHL
Sbjct: 61  ELGDSNFGSSWNYLEMFRNRYPRIRFDKVKSSDCREHDCSVCLTQFEPESAINHLSCGHL 120

Query: 121 FHTDCLEKWLDYWNITCPLCRTPLMSEEGKSCF 154
           FHT+CLEKWLDYWNITCPLCRTPLMSEE KSCF
Sbjct: 121 FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCF 153

The following BLAST results are available for this feature:
BLAST of Csa7G031580 vs. Swiss-Prot
Match NameE-valueIdentityDescription
XERIC_ARATH6.8e-3856.49Probable E3 ubiquitin-protein ligase XERICO OS=Arabidopsis thaliana GN=XERICO PE... [more]
ATL4_ARATH1.4e-1134.90E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana GN=ATL4 PE=1 SV=1[more]
RHA2A_ARATH3.9e-0947.06E3 ubiquitin-protein ligase RHA2A OS=Arabidopsis thaliana GN=RHA2A PE=1 SV=1[more]
RHA2B_ARATH6.6e-0947.92E3 ubiquitin-protein ligase RHA2B OS=Arabidopsis thaliana GN=RHA2B PE=1 SV=2[more]
ATL18_ARATH1.1e-0853.33RING-H2 finger protein ATL18 OS=Arabidopsis thaliana GN=ATL18 PE=2 SV=1[more]
BLAST of Csa7G031580 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K534_CUCSA6.5e-88100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G031580 PE=4 SV=1[more]
A0A0A0K6E0_CUCSA4.1e-8295.45Uncharacterized protein OS=Cucumis sativus GN=Csa_7G031570 PE=4 SV=1[more]
A0A0A0KAU4_CUCSA1.2e-5269.03Uncharacterized protein OS=Cucumis sativus GN=Csa_6G113550 PE=4 SV=1[more]
B9IAV8_POPTR4.9e-5168.18Putative RING zinc finger family protein OS=Populus trichocarpa GN=POPTR_0014s16... [more]
A0A061DMB3_THECC6.0e-4965.58RING/U-box superfamily protein, putative OS=Theobroma cacao GN=TCM_002456 PE=4 S... [more]
BLAST of Csa7G031580 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G04240.13.8e-3956.49 RING/U-box superfamily protein[more]
AT1G67856.16.6e-1532.67 RING/U-box superfamily protein[more]
AT3G60220.18.0e-1334.90 TOXICOS EN LEVADURA 4[more]
AT3G61460.11.4e-1242.67 brassinosteroid-responsive RING-H2[more]
AT1G15100.12.2e-1047.06 RING-H2 finger A2A[more]
BLAST of Csa7G031580 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778723425|ref|XP_004144555.2|9.3e-88100.00PREDICTED: probable E3 ubiquitin-protein ligase XERICO isoform X2 [Cucumis sativ... [more]
gi|778723422|ref|XP_011658651.1|1.8e-86100.00PREDICTED: probable E3 ubiquitin-protein ligase XERICO isoform X1 [Cucumis sativ... [more]
gi|778723418|ref|XP_011658650.1|5.9e-8295.45PREDICTED: probable E3 ubiquitin-protein ligase XERICO [Cucumis sativus][more]
gi|659124198|ref|XP_008462031.1|8.5e-8193.51PREDICTED: E3 ubiquitin-protein ligase ATL4-like isoform X1 [Cucumis melo][more]
gi|659124200|ref|XP_008462032.1|1.6e-7993.46PREDICTED: E3 ubiquitin-protein ligase ATL4-like isoform X2 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003824 catalytic activity
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU101794cucumber EST collection version 3.0transcribed_cluster
CU103180cucumber EST collection version 3.0transcribed_cluster
CU110290cucumber EST collection version 3.0transcribed_cluster
CU120531cucumber EST collection version 3.0transcribed_cluster
CU158609cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G031580.1Csa7G031580.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU103180CU103180transcribed_cluster
CU120531CU120531transcribed_cluster
CU101794CU101794transcribed_cluster
CU158609CU158609transcribed_cluster
CU110290CU110290transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 98..141
score: 3.9
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 99..140
score: 1.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 99..141
score: 12
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 96..143
score: 8.5
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 98..145
score: 3.8
NoneNo IPR availablePANTHERPTHR14155:SF184SUBFAMILY NOT NAMEDcoord: 98..145
score: 3.8
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 93..146
score: 1.81