Csa7G031560 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G031560
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 1678556 .. 1679652 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTTTATTTCCATTTAAGATTGGATTTCCCACTCTGCCGTACACATCAAATTCAATAATAAGAATTTTATTTTTCTTTTATTTATTTTTTAATAAAACCATCCTTATTTTTTCCTTTTACTAAACCCTATTTCTCGCTCAGTCATTCTCTCCGTCTATTACTGAACCCTCCCCCGCCTGCCGCACTCCCTCCGCTCTTCCTCCTACCGGACGGCGCACTAACAGCTGCCGCAGCCTCAGCCTCAGCCTTCCGGCGAATTCGCTGTTGCCCCCCTCCATCTTACACTCTCGCCTCTTCCAGCAATCTGAGTTGCTTATATCTGTTTTTCATTCTTCTTAGAAGCACACTGGTTCAGCCCCTTGTCATCGCCGCCGTTGCTCATTTTTCAGGTCTCCAAGGTTTTTTTTTTTCGCTTTATTTTGTTTTGTTGGGCTATGTTGGTTTATTCTCTTCACCGACGGAGAAGAAAAATCGATAGTGTTTTTTTTGGGGTTGTTGATTGCTTCTTCAACCAATGTTCAAGTAGTCTGAATGAAATTATAAAGTTAAGAATTTTTATTAGAGGGAAAAAAAGATTGAATCAAGAGGAATAAGGGAAAAAACTTATCATTCCTATCGGTGTTAGTAAATGAAATGATAAAATGTTTAAGAAGATGAACAAAGAAAAAGAGAAAATTCACTTAGTTTGTTTGGCTATAAAAAGACTTGTTGGAACAGAAAGCCTGTGTTTAAATATATTAAAGTTATTGTTATCAATTAAAAACAAAATCAACATTGGACAAATAAACTAGAAAGATAACATTGAGTTTGAGTATGATCGAACGACATCGAATCTTCTTGAATATTGAAGAAACTATGAATGCCTACGAACTGGCATATGGTGGTTTTTGTTAGACAGGCGTAAATTAAATTTATACATATATAAGAAATCTTATGAGGTGTTCATATATATTATGGGGTAGAATTGTAAACAGGTGTGTGTATATTAGTTTAAACTCATGTCATTTTTCAAACAATTGGTTTCATTTTTTTGGGACATCCGAAAACACTGATTTATAATCCTTCCAAATTCAGGGGTTTCAAACAGGGGTTAA

mRNA sequence

ATGTTTTTATTTCCATTTAAGATTGGATTTCCCACTCTGCCTCATTCTCTCCGTCTATTACTGAACCCTCCCCCGCCTGCCGCACTCCCTCCGCTCTTCCTCCTACCGGACGGCGCACTAACAGCTGCCGCAGCCTCAGCCTCAGCCTTCCGGCGAATTCGCTGTTGCCCCCCTCCATCTTACACTCTCGCCTCTTCCAGCAATCTGAGTTGCTTATATCTGTTTTTCATTCTTCTTAGAAGCACACTGGTTCAGCCCCTTGTCATCGCCGCCGTTGCTCATTTTTCAGGGGTTTCAAACAGGGGTTAA

Coding sequence (CDS)

ATGTTTTTATTTCCATTTAAGATTGGATTTCCCACTCTGCCTCATTCTCTCCGTCTATTACTGAACCCTCCCCCGCCTGCCGCACTCCCTCCGCTCTTCCTCCTACCGGACGGCGCACTAACAGCTGCCGCAGCCTCAGCCTCAGCCTTCCGGCGAATTCGCTGTTGCCCCCCTCCATCTTACACTCTCGCCTCTTCCAGCAATCTGAGTTGCTTATATCTGTTTTTCATTCTTCTTAGAAGCACACTGGTTCAGCCCCTTGTCATCGCCGCCGTTGCTCATTTTTCAGGGGTTTCAAACAGGGGTTAA

Protein sequence

MFLFPFKIGFPTLPHSLRLLLNPPPPAALPPLFLLPDGALTAAAASASAFRRIRCCPPPSYTLASSSNLSCLYLFFILLRSTLVQPLVIAAVAHFSGVSNRG*
Homology
[Close]
BLAST of Csa7G031560 vs. TrEMBL
Match: A0A0A0K125_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G031560 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 9.4e-51
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1 

Query: 1   MFLFPFKIGFPTLPHSLRLLLNPPPPAALPPLFLLPDGALTAAAASASAFRRIRCCPPPS 60
           MFLFPFKIGFPTLPHSLRLLLNPPPPAALPPLFLLPDGALTAAAASASAFRRIRCCPPPS
Sbjct: 1   MFLFPFKIGFPTLPHSLRLLLNPPPPAALPPLFLLPDGALTAAAASASAFRRIRCCPPPS 60

Query: 61  YTLASSSNLSCLYLFFILLRSTLVQPLVIAAVAHFSGVSNRG 103
           YTLASSSNLSCLYLFFILLRSTLVQPLVIAAVAHFSGVSNRG
Sbjct: 61  YTLASSSNLSCLYLFFILLRSTLVQPLVIAAVAHFSGVSNRG 102

[Close]
BLAST of Csa7G031560 vs. NCBI nr
Match: gi|700188162|gb|KGN43395.1| (hypothetical protein Csa_7G031560 [Cucumis sativus])

HSP 1 Score: 207.2 bits (526), Expect = 1.4e-50
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1 

Query: 1   MFLFPFKIGFPTLPHSLRLLLNPPPPAALPPLFLLPDGALTAAAASASAFRRIRCCPPPS 60
           MFLFPFKIGFPTLPHSLRLLLNPPPPAALPPLFLLPDGALTAAAASASAFRRIRCCPPPS
Sbjct: 1   MFLFPFKIGFPTLPHSLRLLLNPPPPAALPPLFLLPDGALTAAAASASAFRRIRCCPPPS 60

Query: 61  YTLASSSNLSCLYLFFILLRSTLVQPLVIAAVAHFSGVSNRG 103
           YTLASSSNLSCLYLFFILLRSTLVQPLVIAAVAHFSGVSNRG
Sbjct: 61  YTLASSSNLSCLYLFFILLRSTLVQPLVIAAVAHFSGVSNRG 102

The following BLAST results are available for this feature:
BLAST of Csa7G031560 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K125_CUCSA9.4e-51100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G031560 PE=4 SV=1[more]
BLAST of Csa7G031560 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188162|gb|KGN43395.1|1.4e-50100.00hypothetical protein Csa_7G031560 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU132648cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G031560.1Csa7G031560.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU132648CU132648transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G031560Wax gourdcuwgoB670
Csa7G031560Wax gourdcuwgoB679
Csa7G031560Cucumber (Chinese Long) v2cucuB171
Csa7G031560Cucumber (Gy14) v1cgycuB111
Csa7G031560Cucumber (Gy14) v1cgycuB156
Csa7G031560Cucurbita maxima (Rimu)cmacuB148
Csa7G031560Cucurbita maxima (Rimu)cmacuB527
Csa7G031560Cucurbita maxima (Rimu)cmacuB571
Csa7G031560Cucurbita maxima (Rimu)cmacuB576
Csa7G031560Cucurbita moschata (Rifu)cmocuB132
Csa7G031560Cucurbita moschata (Rifu)cmocuB140
Csa7G031560Cucurbita moschata (Rifu)cmocuB518
Csa7G031560Cucurbita moschata (Rifu)cmocuB565
Csa7G031560Melon (DHL92) v3.5.1cumeB517
Csa7G031560Melon (DHL92) v3.5.1cumeB530
Csa7G031560Watermelon (Charleston Gray)cuwcgB546
Csa7G031560Watermelon (97103) v1cuwmB604
Csa7G031560Cucurbita pepo (Zucchini)cpecuB257
Csa7G031560Cucurbita pepo (Zucchini)cpecuB298
Csa7G031560Cucurbita pepo (Zucchini)cpecuB690
Csa7G031560Cucurbita pepo (Zucchini)cpecuB697
Csa7G031560Bottle gourd (USVL1VR-Ls)culsiB488
Csa7G031560Bottle gourd (USVL1VR-Ls)culsiB494
Csa7G031560Cucumber (Gy14) v2cgybcuB291
Csa7G031560Cucumber (Gy14) v2cgybcuB324
Csa7G031560Melon (DHL92) v3.6.1cumedB496
Csa7G031560Melon (DHL92) v3.6.1cumedB509
Csa7G031560Silver-seed gourdcarcuB0228
Csa7G031560Silver-seed gourdcarcuB0384
Csa7G031560Silver-seed gourdcarcuB1080
Csa7G031560Silver-seed gourdcarcuB1081
Csa7G031560Watermelon (97103) v2cuwmbB529