Csa7G029400 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa7G029400
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	AT-hook DNA-binding protein; contains IPR014476 (Predicted AT-hook DNA-binding)
Location	Chr7 : 1551722 .. 1552483 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GACGGATTGAGCAAATTCTTCCTATTTTATTAACTCTATAAACAACCAAAGGATTTCATCCTTTCAACAACACAGACAATAATGTCTGATTTGAACTCCGCCGTCCACGGCGCCTCCTCCCGCAACGCCAATCAATTTCTCGGTTCAGACCTCCAACTTCAAAACTTCTCACAAACCCATCTTCCCGATCCCAATTCTGCCGATTCAACCACTCCCACCACCGGCGGTTCATCCTCGCGCCGCCCTCGTGGCCGCCCCGCCGGCTCCAAGAACAAGCCAAAACCGCCGGTGATCGTAACACGTGACAGCCCCAACTCTCTGAGGTCGCACGTGCTAGAGGTTTCCCCAGGCTCCGATGTGGTTGAATCCATCTCGACTTACGTCACCCGCCGCCGCTACGGCGTTTGCATTCTCGGCGGCACTGGCGCCGTCACCAACGTCAACTTGCGTCAGCCGATGTCTCCGTCGGGTTCTGTTATGACTCTTCATGGAACATTTGAGATTGTGTCTCTGACTGGCACGGCGTTGCCGCCTTCGGGTGCTGGAGGGCTAACGATTTATTTGGCCGACAGGCAACGGCAAGGACATGTCGTCGGAGGAAGCGTCGTCGGGCCATTGAGGGCATCGAGTCCAGTTACACTGATGGTGGCATCGTTTACGAATGCAGTGTATGATCGGCTACCGGTGGAGGAGGCAGAGCCGCCGGTACAAGCTCAGGCATCGGCGTCGCCATCTTCAGATATTACTGGTAAAAGTTTTTAA

mRNA sequence

ATGTCTGATTTGAACTCCGCCGTCCACGGCGCCTCCTCCCGCAACGCCAATCAATTTCTCGGTTCAGACCTCCAACTTCAAAACTTCTCACAAACCCATCTTCCCGATCCCAATTCTGCCGATTCAACCACTCCCACCACCGGCGGTTCATCCTCGCGCCGCCCTCGTGGCCGCCCCGCCGGCTCCAAGAACAAGCCAAAACCGCCGGTGATCGTAACACGTGACAGCCCCAACTCTCTGAGGTCGCACGTGCTAGAGGTTTCCCCAGGCTCCGATGTGGTTGAATCCATCTCGACTTACGTCACCCGCCGCCGCTACGGCGTTTGCATTCTCGGCGGCACTGGCGCCGTCACCAACGTCAACTTGCGTCAGCCGATGTCTCCGTCGGGTTCTGTTATGACTCTTCATGGAACATTTGAGATTGTGTCTCTGACTGGCACGGCGTTGCCGCCTTCGGGTGCTGGAGGGCTAACGATTTATTTGGCCGACAGGCAACGGCAAGGACATGTCGTCGGAGGAAGCGTCGTCGGGCCATTGAGGGCATCGAGTCCAGTTACACTGATGGTGGCATCGTTTACGAATGCAGTGTATGATCGGCTACCGGTGGAGGAGGCAGAGCCGCCGGTACAAGCTCAGGCATCGGCGTCGCCATCTTCAGATATTACTGGTAAAAGTTTTTAA

Coding sequence (CDS)

ATGTCTGATTTGAACTCCGCCGTCCACGGCGCCTCCTCCCGCAACGCCAATCAATTTCTCGGTTCAGACCTCCAACTTCAAAACTTCTCACAAACCCATCTTCCCGATCCCAATTCTGCCGATTCAACCACTCCCACCACCGGCGGTTCATCCTCGCGCCGCCCTCGTGGCCGCCCCGCCGGCTCCAAGAACAAGCCAAAACCGCCGGTGATCGTAACACGTGACAGCCCCAACTCTCTGAGGTCGCACGTGCTAGAGGTTTCCCCAGGCTCCGATGTGGTTGAATCCATCTCGACTTACGTCACCCGCCGCCGCTACGGCGTTTGCATTCTCGGCGGCACTGGCGCCGTCACCAACGTCAACTTGCGTCAGCCGATGTCTCCGTCGGGTTCTGTTATGACTCTTCATGGAACATTTGAGATTGTGTCTCTGACTGGCACGGCGTTGCCGCCTTCGGGTGCTGGAGGGCTAACGATTTATTTGGCCGACAGGCAACGGCAAGGACATGTCGTCGGAGGAAGCGTCGTCGGGCCATTGAGGGCATCGAGTCCAGTTACACTGATGGTGGCATCGTTTACGAATGCAGTGTATGATCGGCTACCGGTGGAGGAGGCAGAGCCGCCGGTACAAGCTCAGGCATCGGCGTCGCCATCTTCAGATATTACTGGTAAAAGTTTTTAA

Protein sequence

MSDLNSAVHGASSRNANQFLGSDLQLQNFSQTHLPDPNSADSTTPTTGGSSSRRPRGRPAGSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTYVTRRRYGVCILGGTGAVTNVNLRQPMSPSGSVMTLHGTFEIVSLTGTALPPSGAGGLTIYLADRQRQGHVVGGSVVGPLRASSPVTLMVASFTNAVYDRLPVEEAEPPVQAQASASPSSDITGKSF*

Homology

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BLAST of Csa7G029400 vs. Swiss-Prot
Match: AHL25_ARATH (AT-hook motif nuclear-localized protein 25 OS=Arabidopsis thaliana GN=AHL25 PE=1 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 5.8e-62
Identity = 137/236 (58.05%), Postives = 157/236 (66.53%), Query Frame = 1


Query: 20  LGSDLQLQNFSQTHLP-DPNSAD-----------STTPT---------TGGSSSRRPRGR 79
           LG +L LQ    +  P D N+ +            TTPT         +G SS RRPRGR
Sbjct: 9   LGQELHLQRPEDSRTPPDQNNMELNRSEADEAKAETTPTGGATSSATASGSSSGRRPRGR 68

Query: 80  PAGSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTYVTRRRYGVCILGGTGAVT 139
           PAGSKNKPKPP I+TRDSPN LRSHVLEV+ GSD+ E++STY TRR  GVCI+ GTGAVT
Sbjct: 69  PAGSKNKPKPPTIITRDSPNVLRSHVLEVTSGSDISEAVSTYATRRGCGVCIISGTGAVT 128

Query: 140 NVNLRQPMSPS-GSVMTLHGTFEIVSLTGTALP---PSGAGGLTIYLADRQRQGHVVGGS 199
           NV +RQP +P+ G V+TLHG F+I+SLTGTALP   P GAGGLT+YLA    QG VVGG+
Sbjct: 129 NVTIRQPAAPAGGGVITLHGRFDILSLTGTALPPPAPPGAGGLTVYLAG--GQGQVVGGN 188

Query: 200 VVGPLRASSPVTLMVASFTNAVYDRLPVEEAEPP-------VQAQASASPSSDITG 224
           V G L AS PV LM ASF NAVYDRLP+EE E P        Q Q  AS SS++TG
Sbjct: 189 VAGSLIASGPVVLMAASFANAVYDRLPIEEEETPPPRTTGVQQQQPEASQSSEVTG 242

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BLAST of Csa7G029400 vs. Swiss-Prot
Match: AHL27_ARATH (AT-hook motif nuclear-localized protein 27 OS=Arabidopsis thaliana GN=AHL27 PE=1 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 3.3e-57
Identity = 122/209 (58.37%), Postives = 144/209 (68.90%), Query Frame = 1


Query: 41  DSTTPTTGGSSSRRPRGRPAGSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTY 100
           DS   T+  +  +RPRGRP GSKNK KPP+IVTRDSPN+LRSHVLEVSPG+D+VES+STY
Sbjct: 74  DSDPNTSSSAPGKRPRGRPPGSKNKAKPPIIVTRDSPNALRSHVLEVSPGADIVESVSTY 133

Query: 101 VTRRRYGVCILGGTGAVTNVNLRQPMSP--------SGSVMTLHGTFEIVSLTGTALP-- 160
             RR  GV +LGG G V+NV LRQP++P         G V+TLHG FEI+SLTGT LP  
Sbjct: 134 ARRRGRGVSVLGGNGTVSNVTLRQPVTPGNGGGVSGGGGVVTLHGRFEILSLTGTVLPPP 193

Query: 161 -PSGAGGLTIYLADRQRQGHVVGGSVVGPLRASSPVTLMVASFTNAVYDRLPVEEAE--- 220
            P GAGGL+I+LA    QG VVGGSVV PL AS+PV LM ASF+NAV++RLP+EE E   
Sbjct: 194 APPGAGGLSIFLAG--GQGQVVGGSVVAPLIASAPVILMAASFSNAVFERLPIEEEEEEG 253

Query: 221 -----------PPVQAQASASPSSDITGK 225
                      P +Q   SASP S +TG+
Sbjct: 254 GGGGGGGGGGPPQMQQAPSASPPSGVTGQ 280

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BLAST of Csa7G029400 vs. Swiss-Prot
Match: AHL22_ARATH (AT-hook motif nuclear-localized protein 22 OS=Arabidopsis thaliana GN=AHL22 PE=1 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 9.2e-52
Identity = 112/206 (54.37%), Postives = 138/206 (66.99%), Query Frame = 1


Query: 36  DPNS-----ADSTTPTTGGSS----------SRRPRGRPAGSKNKPKPPVIVTRDSPNSL 95
           DPN       D +TP +GG S          +RRPRGRPAGSKNKPKPP+I+TRDS N+L
Sbjct: 57  DPNEHSSAGKDQSTPGSGGESGGGGGGDNHITRRPRGRPAGSKNKPKPPIIITRDSANAL 116

Query: 96  RSHVLEVSPGSDVVESISTYVTRRRYGVCILGGTGAVTNVNLRQPMSPSG---SVMTLHG 155
           +SHV+EV+ G DV+ES++ +  RR+ G+C+L G GAVTNV +RQP S  G   SV+ LHG
Sbjct: 117 KSHVMEVANGCDVMESVTVFARRRQRGICVLSGNGAVTNVTIRQPASVPGGGSSVVNLHG 176

Query: 156 TFEIVSLTGTALP---PSGAGGLTIYLADRQRQGHVVGGSVVGPLRASSPVTLMVASFTN 215
            FEI+SL+G+ LP   P  A GLTIYLA    QG VVGGSVVGPL AS PV +M ASF N
Sbjct: 177 RFEILSLSGSFLPPPAPPAASGLTIYLAG--GQGQVVGGSVVGPLMASGPVVIMAASFGN 236

Query: 216 AVYDRLPVEEAEPPVQAQASASPSSD 221
           A Y+RLP+EE +   Q   + + + D
Sbjct: 237 AAYERLPLEEDDQEEQTAGAVANNID 260

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BLAST of Csa7G029400 vs. Swiss-Prot
Match: AHL29_ARATH (AT-hook motif nuclear-localized protein 29 OS=Arabidopsis thaliana GN=AHL29 PE=1 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 2.1e-51
Identity = 107/180 (59.44%), Postives = 128/180 (71.11%), Query Frame = 1


Query: 36  DPNSADSTTPTTGGSSSRRPRGRPAGSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVE 95
           D N    + P T GS+ +RPRGRP GSKNKPKPPVIVTRDSPN LRSHVLEVS G+D+VE
Sbjct: 55  DSNKDPGSDPVTSGSTGKRPRGRPPGSKNKPKPPVIVTRDSPNVLRSHVLEVSSGADIVE 114

Query: 96  SISTYVTRRRYGVCILGGTGAVTNVNLRQPMSP--------SGSVMTLHGTFEIVSLTGT 155
           S++TY  RR  GV IL G G V NV+LRQP +         +G V+ LHG FEI+SLTGT
Sbjct: 115 SVTTYARRRGRGVSILSGNGTVANVSLRQPATTAAHGANGGTGGVVALHGRFEILSLTGT 174

Query: 156 ALP---PSGAGGLTIYLADRQRQGHVVGGSVVGPLRASSPVTLMVASFTNAVYDRLPVEE 205
            LP   P G+GGL+I+L+    QG V+GG+VV PL AS PV LM ASF+NA ++RLP+E+
Sbjct: 175 VLPPPAPPGSGGLSIFLSG--VQGQVIGGNVVAPLVASGPVILMAASFSNATFERLPLED 232

[Close]

BLAST of Csa7G029400 vs. Swiss-Prot
Match: AHL26_ARATH (AT-hook motif nuclear-localized protein 26 OS=Arabidopsis thaliana GN=AHL26 PE=2 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 1.3e-50
Identity = 101/169 (59.76%), Postives = 128/169 (75.74%), Query Frame = 1


Query: 47  TGGSSSRRPRGRPAGSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTYVTRRRY 106
           +G   +RRPRGRPAGSKNKPK P+I+TRDS N+LR+HV+E+  G D+V+ ++T+  RR+ 
Sbjct: 112 SGEQMTRRPRGRPAGSKNKPKAPIIITRDSANALRTHVMEIGDGCDIVDCMATFARRRQR 171

Query: 107 GVCILGGTGAVTNVNLRQPMSPSGSVMTLHGTFEIVSLTGTALP---PSGAGGLTIYLAD 166
           GVC++ GTG+VTNV +RQP SP GSV++LHG FEI+SL+G+ LP   P  A GL++YLA 
Sbjct: 172 GVCVMSGTGSVTNVTIRQPGSPPGSVVSLHGRFEILSLSGSFLPPPAPPAATGLSVYLAG 231

Query: 167 RQRQGHVVGGSVVGPLRASSPVTLMVASFTNAVYDRLPVEEAE--PPVQ 211
              QG VVGGSVVGPL  S PV +M ASF+NA Y+RLP+EE E   PVQ
Sbjct: 232 --GQGQVVGGSVVGPLLCSGPVVVMAASFSNAAYERLPLEEDEMQTPVQ 278

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BLAST of Csa7G029400 vs. TrEMBL
Match: A0A0A0K104_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G029400 PE=4 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 1.2e-122
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 1


Query: 1   MSDLNSAVHGASSRNANQFLGSDLQLQNFSQTHLPDPNSADSTTPTTGGSSSRRPRGRPA 60
           MSDLNSAVHGASSRNANQFLGSDLQLQNFSQTHLPDPNSADSTTPTTGGSSSRRPRGRPA
Sbjct: 1   MSDLNSAVHGASSRNANQFLGSDLQLQNFSQTHLPDPNSADSTTPTTGGSSSRRPRGRPA 60

Query: 61  GSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTYVTRRRYGVCILGGTGAVTNV 120
           GSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTYVTRRRYGVCILGGTGAVTNV
Sbjct: 61  GSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTYVTRRRYGVCILGGTGAVTNV 120

Query: 121 NLRQPMSPSGSVMTLHGTFEIVSLTGTALPPSGAGGLTIYLADRQRQGHVVGGSVVGPLR 180
           NLRQPMSPSGSVMTLHGTFEIVSLTGTALPPSGAGGLTIYLADRQRQGHVVGGSVVGPLR
Sbjct: 121 NLRQPMSPSGSVMTLHGTFEIVSLTGTALPPSGAGGLTIYLADRQRQGHVVGGSVVGPLR 180

Query: 181 ASSPVTLMVASFTNAVYDRLPVEEAEPPVQAQASASPSSDITGKSF 227
           ASSPVTLMVASFTNAVYDRLPVEEAEPPVQAQASASPSSDITGKSF
Sbjct: 181 ASSPVTLMVASFTNAVYDRLPVEEAEPPVQAQASASPSSDITGKSF 226

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BLAST of Csa7G029400 vs. TrEMBL
Match: A0A061E2S5_THECC (AT-hook DNA-binding family protein, putative OS=Theobroma cacao GN=TCM_007603 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 3.3e-72
Identity = 151/241 (62.66%), Postives = 177/241 (73.44%), Query Frame = 1


Query: 1   MSDLNSAVHGASSRNANQFLGSDLQLQNFSQTHL--------------PDPNSADSTTPT 60
           MS L S   G+ SR  +Q LG +LQLQ  SQ HL               +   AD+ T +
Sbjct: 1   MSGLES---GSGSRYVHQLLGPELQLQRSSQPHLNVSQLTDSKQSPETEEGTDADAATTS 60

Query: 61  TGGSS-SRRPRGRPAGSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTYVTRRR 120
           +GG++  RRPRGRPAGSKNKPKPP+I+TRDSPN+LRSHVLE++ GSD+V+S+S Y  RR 
Sbjct: 61  SGGTTPGRRPRGRPAGSKNKPKPPIIITRDSPNALRSHVLEITSGSDIVDSVSNYARRRG 120

Query: 121 YGVCILGGTGAVTNVNLRQPMSPSGSVMTLHGTFEIVSLTGTALP---PSGAGGLTIYLA 180
            GVC+L GTGAVTNV LRQP +P+GSV+TLHG FEI+SLTGT+LP   P GAGGLTIYLA
Sbjct: 121 RGVCVLSGTGAVTNVTLRQPAAPAGSVVTLHGRFEILSLTGTSLPPPAPPGAGGLTIYLA 180

Query: 181 DRQRQGHVVGGSVVGPLRASSPVTLMVASFTNAVYDRLPVEEAEPPVQAQASASPSSDIT 224
               QG VVGGSV GPL AS PV LM ASF NAVYDRLPVEE EPPVQ Q +AS SS++T
Sbjct: 181 G--GQGQVVGGSVAGPLMASGPVVLMAASFANAVYDRLPVEEEEPPVQVQPAASQSSEVT 236

[Close]

BLAST of Csa7G029400 vs. TrEMBL
Match: A0A0D2PX98_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G215400 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 6.4e-68
Identity = 146/231 (63.20%), Postives = 169/231 (73.16%), Query Frame = 1


Query: 1   MSDLNSAVHGASSRNANQFLGSDLQLQNFSQT--HLPDPNSAD-STTPTTGGSSSRRPRG 60
           MS L S   G+ SR  +Q LG +LQLQ   +   H P+    D   T T+ G   RRPRG
Sbjct: 1   MSGLES---GSGSRYVHQLLGPELQLQPQLRDTKHSPEKEGTDHGGTTTSSGGGERRPRG 60

Query: 61  RPAGSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTYVTRRRYGVCILGGTGAV 120
           RPAGSKNKPKPP+IVTRDSPNSLRSHVLE+S GSD+V+S++ Y  RR  GVC+L GTGAV
Sbjct: 61  RPAGSKNKPKPPIIVTRDSPNSLRSHVLEISSGSDIVDSVANYARRRGRGVCVLSGTGAV 120

Query: 121 TNVNLRQPMSPSGSVMTLHGTFEIVSLTGTALP---PSGAGGLTIYLADRQRQGHVVGGS 180
           TNV LRQP +PSGSV+TLHG FE++SLTGT+LP   P GAGGLTIYLA    QG VVGGS
Sbjct: 121 TNVTLRQPAAPSGSVITLHGRFEVLSLTGTSLPPPAPPGAGGLTIYLAG--GQGQVVGGS 180

Query: 181 VVGPLRASSPVTLMVASFTNAVYDRLPV--EEAEPPVQAQASASPSSDITG 224
           V GPL AS PV LM ASF NAVYDRLP+  +E EP VQ Q +AS +S +TG
Sbjct: 181 VAGPLMASGPVVLMAASFANAVYDRLPLDNQEEEPAVQLQPAASQTSGVTG 226

[Close]

BLAST of Csa7G029400 vs. TrEMBL
Match: A0A0D2V556_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G138000 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 3.2e-67
Identity = 143/228 (62.72%), Postives = 166/228 (72.81%), Query Frame = 1


Query: 10  GASSRNANQFLGSDLQLQNFSQTHLPDPNSADST------TPTTGGSSS---RRPRGRPA 69
           GA SR  +  LG +LQLQ  S+     P    +T      T ++GG S+   RRPRGRPA
Sbjct: 4   GAGSRYVHHLLGPELQLQRSSEPQFNSPEKQGTTDHPSAATTSSGGGSTTPGRRPRGRPA 63

Query: 70  GSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTYVTRRRYGVCILGGTGAVTNV 129
           GSKNKPKPP+IV RDSPNSLRSHVLE+S GSD+V+S+S Y  RR  GVC+L GTGAVTNV
Sbjct: 64  GSKNKPKPPIIVARDSPNSLRSHVLEISSGSDIVDSVSDYARRRGRGVCVLSGTGAVTNV 123

Query: 130 NLRQPMSPSGSVMTLHGTFEIVSLTGTALP---PSGAGGLTIYLADRQRQGHVVGGSVVG 189
            LRQP +P GSV+TLHG FEI+SLTGT+LP   P GAGGLT+YLA    QG VVGGSVVG
Sbjct: 124 TLRQPAAPPGSVVTLHGRFEILSLTGTSLPPPAPPGAGGLTVYLAG--VQGQVVGGSVVG 183

Query: 190 PLRASSPVTLMVASFTNAVYDRLPVEEAEPPV--QAQASASPSSDITG 224
           PL AS PV LM ASF NAVYDRLP+EE +PP   + Q +AS SS +TG
Sbjct: 184 PLMASGPVVLMAASFANAVYDRLPLEEEDPPPVHEQQPAASQSSGLTG 229

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BLAST of Csa7G029400 vs. TrEMBL
Match: F6I0P7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0038g04110 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 2.1e-63
Identity = 142/231 (61.47%), Postives = 162/231 (70.13%), Query Frame = 1


Query: 10  GASSRNANQFLGSDLQLQNF-SQTHLP--------DPNSADST----TPTTGGSSSRRPR 69
           GA SR  +Q    +LQL+    Q H P         P + D T    +P    +SSRRPR
Sbjct: 7   GAGSRYIHQLFRPELQLERTPQQPHQPPQLNDSGDSPENEDRTDPDGSPGAATTSSRRPR 66

Query: 70  GRPAGSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTYVTRRRYGVCILGGTGA 129
           GRP GSKNK KPP+I+TRDSPN+LRSHVLE+S G+D+VES+S Y  RR  GVCIL G GA
Sbjct: 67  GRPPGSKNKAKPPIIITRDSPNALRSHVLEISAGADIVESVSNYARRRGRGVCILSGGGA 126

Query: 130 VTNVNLRQPMSPSGSVMTLHGTFEIVSLTGTALP---PSGAGGLTIYLADRQRQGHVVGG 189
           VT+V LRQP +PSGSV+TLHG FEI+SLTGTALP   P GAGGLTIYL     QG VVGG
Sbjct: 127 VTDVTLRQPAAPSGSVVTLHGRFEILSLTGTALPPPAPPGAGGLTIYLGG--GQGQVVGG 186

Query: 190 SVVGPLRASSPVTLMVASFTNAVYDRLPV-EEAEPPVQAQASASPSSDITG 224
            VVGPL AS PV LM ASF NAVYDRLP+ EE E PVQ Q +AS SS +TG
Sbjct: 187 RVVGPLVASGPVLLMAASFANAVYDRLPLEEEEESPVQVQPTASQSSGVTG 235

[Close]

BLAST of Csa7G029400 vs. TAIR10
Match: AT4G35390.1 (AT4G35390.1 AT-hook protein of GA feedback 1)

HSP 1 Score: 238.8 bits (608), Expect = 3.3e-63
Identity = 137/236 (58.05%), Postives = 157/236 (66.53%), Query Frame = 1


Query: 20  LGSDLQLQNFSQTHLP-DPNSAD-----------STTPT---------TGGSSSRRPRGR 79
           LG +L LQ    +  P D N+ +            TTPT         +G SS RRPRGR
Sbjct: 9   LGQELHLQRPEDSRTPPDQNNMELNRSEADEAKAETTPTGGATSSATASGSSSGRRPRGR 68

Query: 80  PAGSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTYVTRRRYGVCILGGTGAVT 139
           PAGSKNKPKPP I+TRDSPN LRSHVLEV+ GSD+ E++STY TRR  GVCI+ GTGAVT
Sbjct: 69  PAGSKNKPKPPTIITRDSPNVLRSHVLEVTSGSDISEAVSTYATRRGCGVCIISGTGAVT 128

Query: 140 NVNLRQPMSPS-GSVMTLHGTFEIVSLTGTALP---PSGAGGLTIYLADRQRQGHVVGGS 199
           NV +RQP +P+ G V+TLHG F+I+SLTGTALP   P GAGGLT+YLA    QG VVGG+
Sbjct: 129 NVTIRQPAAPAGGGVITLHGRFDILSLTGTALPPPAPPGAGGLTVYLAG--GQGQVVGGN 188

Query: 200 VVGPLRASSPVTLMVASFTNAVYDRLPVEEAEPP-------VQAQASASPSSDITG 224
           V G L AS PV LM ASF NAVYDRLP+EE E P        Q Q  AS SS++TG
Sbjct: 189 VAGSLIASGPVVLMAASFANAVYDRLPIEEEETPPPRTTGVQQQQPEASQSSEVTG 242

[Close]

BLAST of Csa7G029400 vs. TAIR10
Match: AT1G20900.1 (AT1G20900.1 Predicted AT-hook DNA-binding family protein)

HSP 1 Score: 223.0 bits (567), Expect = 1.8e-58
Identity = 122/209 (58.37%), Postives = 144/209 (68.90%), Query Frame = 1


Query: 41  DSTTPTTGGSSSRRPRGRPAGSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTY 100
           DS   T+  +  +RPRGRP GSKNK KPP+IVTRDSPN+LRSHVLEVSPG+D+VES+STY
Sbjct: 74  DSDPNTSSSAPGKRPRGRPPGSKNKAKPPIIVTRDSPNALRSHVLEVSPGADIVESVSTY 133

Query: 101 VTRRRYGVCILGGTGAVTNVNLRQPMSP--------SGSVMTLHGTFEIVSLTGTALP-- 160
             RR  GV +LGG G V+NV LRQP++P         G V+TLHG FEI+SLTGT LP  
Sbjct: 134 ARRRGRGVSVLGGNGTVSNVTLRQPVTPGNGGGVSGGGGVVTLHGRFEILSLTGTVLPPP 193

Query: 161 -PSGAGGLTIYLADRQRQGHVVGGSVVGPLRASSPVTLMVASFTNAVYDRLPVEEAE--- 220
            P GAGGL+I+LA    QG VVGGSVV PL AS+PV LM ASF+NAV++RLP+EE E   
Sbjct: 194 APPGAGGLSIFLAG--GQGQVVGGSVVAPLIASAPVILMAASFSNAVFERLPIEEEEEEG 253

Query: 221 -----------PPVQAQASASPSSDITGK 225
                      P +Q   SASP S +TG+
Sbjct: 254 GGGGGGGGGGPPQMQQAPSASPPSGVTGQ 280

[Close]

BLAST of Csa7G029400 vs. TAIR10
Match: AT2G45430.1 (AT2G45430.1 AT-hook motif nuclear-localized protein 22)

HSP 1 Score: 204.9 bits (520), Expect = 5.2e-53
Identity = 112/206 (54.37%), Postives = 138/206 (66.99%), Query Frame = 1


Query: 36  DPNS-----ADSTTPTTGGSS----------SRRPRGRPAGSKNKPKPPVIVTRDSPNSL 95
           DPN       D +TP +GG S          +RRPRGRPAGSKNKPKPP+I+TRDS N+L
Sbjct: 57  DPNEHSSAGKDQSTPGSGGESGGGGGGDNHITRRPRGRPAGSKNKPKPPIIITRDSANAL 116

Query: 96  RSHVLEVSPGSDVVESISTYVTRRRYGVCILGGTGAVTNVNLRQPMSPSG---SVMTLHG 155
           +SHV+EV+ G DV+ES++ +  RR+ G+C+L G GAVTNV +RQP S  G   SV+ LHG
Sbjct: 117 KSHVMEVANGCDVMESVTVFARRRQRGICVLSGNGAVTNVTIRQPASVPGGGSSVVNLHG 176

Query: 156 TFEIVSLTGTALP---PSGAGGLTIYLADRQRQGHVVGGSVVGPLRASSPVTLMVASFTN 215
            FEI+SL+G+ LP   P  A GLTIYLA    QG VVGGSVVGPL AS PV +M ASF N
Sbjct: 177 RFEILSLSGSFLPPPAPPAASGLTIYLAG--GQGQVVGGSVVGPLMASGPVVIMAASFGN 236

Query: 216 AVYDRLPVEEAEPPVQAQASASPSSD 221
           A Y+RLP+EE +   Q   + + + D
Sbjct: 237 AAYERLPLEEDDQEEQTAGAVANNID 260

[Close]

BLAST of Csa7G029400 vs. TAIR10
Match: AT1G76500.1 (AT1G76500.1 Predicted AT-hook DNA-binding family protein)

HSP 1 Score: 203.8 bits (517), Expect = 1.2e-52
Identity = 107/180 (59.44%), Postives = 128/180 (71.11%), Query Frame = 1


Query: 36  DPNSADSTTPTTGGSSSRRPRGRPAGSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVE 95
           D N    + P T GS+ +RPRGRP GSKNKPKPPVIVTRDSPN LRSHVLEVS G+D+VE
Sbjct: 55  DSNKDPGSDPVTSGSTGKRPRGRPPGSKNKPKPPVIVTRDSPNVLRSHVLEVSSGADIVE 114

Query: 96  SISTYVTRRRYGVCILGGTGAVTNVNLRQPMSP--------SGSVMTLHGTFEIVSLTGT 155
           S++TY  RR  GV IL G G V NV+LRQP +         +G V+ LHG FEI+SLTGT
Sbjct: 115 SVTTYARRRGRGVSILSGNGTVANVSLRQPATTAAHGANGGTGGVVALHGRFEILSLTGT 174

Query: 156 ALP---PSGAGGLTIYLADRQRQGHVVGGSVVGPLRASSPVTLMVASFTNAVYDRLPVEE 205
            LP   P G+GGL+I+L+    QG V+GG+VV PL AS PV LM ASF+NA ++RLP+E+
Sbjct: 175 VLPPPAPPGSGGLSIFLSG--VQGQVIGGNVVAPLVASGPVILMAASFSNATFERLPLED 232

[Close]

BLAST of Csa7G029400 vs. TAIR10
Match: AT4G12050.1 (AT4G12050.1 Predicted AT-hook DNA-binding family protein)

HSP 1 Score: 201.1 bits (510), Expect = 7.5e-52
Identity = 101/169 (59.76%), Postives = 128/169 (75.74%), Query Frame = 1


Query: 47  TGGSSSRRPRGRPAGSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTYVTRRRY 106
           +G   +RRPRGRPAGSKNKPK P+I+TRDS N+LR+HV+E+  G D+V+ ++T+  RR+ 
Sbjct: 112 SGEQMTRRPRGRPAGSKNKPKAPIIITRDSANALRTHVMEIGDGCDIVDCMATFARRRQR 171

Query: 107 GVCILGGTGAVTNVNLRQPMSPSGSVMTLHGTFEIVSLTGTALP---PSGAGGLTIYLAD 166
           GVC++ GTG+VTNV +RQP SP GSV++LHG FEI+SL+G+ LP   P  A GL++YLA 
Sbjct: 172 GVCVMSGTGSVTNVTIRQPGSPPGSVVSLHGRFEILSLSGSFLPPPAPPAATGLSVYLAG 231

Query: 167 RQRQGHVVGGSVVGPLRASSPVTLMVASFTNAVYDRLPVEEAE--PPVQ 211
              QG VVGGSVVGPL  S PV +M ASF+NA Y+RLP+EE E   PVQ
Sbjct: 232 --GQGQVVGGSVVGPLLCSGPVVVMAASFSNAAYERLPLEEDEMQTPVQ 278

[Close]

BLAST of Csa7G029400 vs. NCBI nr
Match: gi|700188142|gb|KGN43375.1| (hypothetical protein Csa_7G029400 [Cucumis sativus])

HSP 1 Score: 447.2 bits (1149), Expect = 1.7e-122
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 1


Query: 1   MSDLNSAVHGASSRNANQFLGSDLQLQNFSQTHLPDPNSADSTTPTTGGSSSRRPRGRPA 60
           MSDLNSAVHGASSRNANQFLGSDLQLQNFSQTHLPDPNSADSTTPTTGGSSSRRPRGRPA
Sbjct: 1   MSDLNSAVHGASSRNANQFLGSDLQLQNFSQTHLPDPNSADSTTPTTGGSSSRRPRGRPA 60

Query: 61  GSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTYVTRRRYGVCILGGTGAVTNV 120
           GSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTYVTRRRYGVCILGGTGAVTNV
Sbjct: 61  GSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTYVTRRRYGVCILGGTGAVTNV 120

Query: 121 NLRQPMSPSGSVMTLHGTFEIVSLTGTALPPSGAGGLTIYLADRQRQGHVVGGSVVGPLR 180
           NLRQPMSPSGSVMTLHGTFEIVSLTGTALPPSGAGGLTIYLADRQRQGHVVGGSVVGPLR
Sbjct: 121 NLRQPMSPSGSVMTLHGTFEIVSLTGTALPPSGAGGLTIYLADRQRQGHVVGGSVVGPLR 180

Query: 181 ASSPVTLMVASFTNAVYDRLPVEEAEPPVQAQASASPSSDITGKSF 227
           ASSPVTLMVASFTNAVYDRLPVEEAEPPVQAQASASPSSDITGKSF
Sbjct: 181 ASSPVTLMVASFTNAVYDRLPVEEAEPPVQAQASASPSSDITGKSF 226

[Close]

BLAST of Csa7G029400 vs. NCBI nr
Match: gi|449453768|ref|XP_004144628.1| (PREDICTED: AT-hook motif nuclear-localized protein 25-like [Cucumis sativus])

HSP 1 Score: 441.4 bits (1134), Expect = 9.4e-121
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 1


Query: 1   MSDLNSAVHGASSRNANQFLGSDLQLQNFSQTHLPDPNSADSTTPTTGGSSSRRPRGRPA 60
           MSDLNSAVHGASSRNANQFLGSDLQLQNFSQTHLPDPNSADSTTPTTGGSSSRRPRGRPA
Sbjct: 1   MSDLNSAVHGASSRNANQFLGSDLQLQNFSQTHLPDPNSADSTTPTTGGSSSRRPRGRPA 60

Query: 61  GSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTYVTRRRYGVCILGGTGAVTNV 120
           GSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTYVTRRRYGVCILGGTGAVTNV
Sbjct: 61  GSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTYVTRRRYGVCILGGTGAVTNV 120

Query: 121 NLRQPMSPSGSVMTLHGTFEIVSLTGTALPPSGAGGLTIYLADRQRQGHVVGGSVVGPLR 180
           NLRQPMSPSGSVMTLHGTFEIVSLTGTALPPSGAGGLTIYLADRQRQGHVVGGSVVGPLR
Sbjct: 121 NLRQPMSPSGSVMTLHGTFEIVSLTGTALPPSGAGGLTIYLADRQRQGHVVGGSVVGPLR 180

Query: 181 ASSPVTLMVASFTNAVYDRLPVEEAEPPVQAQASASPSSDITG 224
           ASSPVTLMVASFTNAVYDRLPVEEAEPPVQAQASASPSSDITG
Sbjct: 181 ASSPVTLMVASFTNAVYDRLPVEEAEPPVQAQASASPSSDITG 223

[Close]

BLAST of Csa7G029400 vs. NCBI nr
Match: gi|659100615|ref|XP_008451184.1| (PREDICTED: putative DNA-binding protein ESCAROLA isoform X2 [Cucumis melo])

HSP 1 Score: 329.7 bits (844), Expect = 4.0e-87
Identity = 175/234 (74.79%), Postives = 191/234 (81.62%), Query Frame = 1


Query: 1   MSDLNSAVHGASSRNANQFLGSDLQLQNFSQTHLPDPN-----------SADSTTPTTGG 60
           MSDLNSAVHG SSR A+QFLGS+LQLQNFSQTHL DPN           SADS TPT+GG
Sbjct: 1   MSDLNSAVHGDSSRYADQFLGSELQLQNFSQTHLGDPNISPETHQQNLNSADSNTPTSGG 60

Query: 61  SSSRRPRGRPAGSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTYVTRRRYGVC 120
           SS+RRPRGRPAGSKNKPKPPVIVTRDSP ++RS VLEV  G DVVESIS+Y TRRR+GVC
Sbjct: 61  SSTRRPRGRPAGSKNKPKPPVIVTRDSPYAMRSLVLEVPAGYDVVESISSYATRRRHGVC 120

Query: 121 ILGGTGAVTNVNLRQPMSPSGSVMTLHGTFEIVSLTGTALPPSGAGGLTIYL--ADRQRQ 180
           ILGGTGAVTNV LRQP +PSG+ M+  GTFEIVSLTGTALP SGAGGLTIYL     QR+
Sbjct: 121 ILGGTGAVTNVKLRQPAAPSGTAMSFRGTFEIVSLTGTALPSSGAGGLTIYLTGGPGQRE 180

Query: 181 GHVVGGSVVGPLRASSPVTLMVASFTNAVYDRLPVEEAEPPVQAQASASPSSDI 222
           G V+GGSV+GPL ASSPV LMVASFTNAV DRLP +EAEPPVQ   S S SS +
Sbjct: 181 GQVIGGSVLGPLTASSPVILMVASFTNAVSDRLPPDEAEPPVQVHPSTSSSSGL 234

[Close]

BLAST of Csa7G029400 vs. NCBI nr
Match: gi|659100613|ref|XP_008451183.1| (PREDICTED: putative DNA-binding protein ESCAROLA isoform X1 [Cucumis melo])

HSP 1 Score: 329.3 bits (843), Expect = 5.2e-87
Identity = 175/232 (75.43%), Postives = 190/232 (81.90%), Query Frame = 1


Query: 1   MSDLNSAVHGASSRNANQFLGSDLQLQNFSQTHLPDPN-----------SADSTTPTTGG 60
           MSDLNSAVHG SSR A+QFLGS+LQLQNFSQTHL DPN           SADS TPT+GG
Sbjct: 1   MSDLNSAVHGDSSRYADQFLGSELQLQNFSQTHLGDPNISPETHQQNLNSADSNTPTSGG 60

Query: 61  SSSRRPRGRPAGSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTYVTRRRYGVC 120
           SS+RRPRGRPAGSKNKPKPPVIVTRDSP ++RS VLEV  G DVVESIS+Y TRRR+GVC
Sbjct: 61  SSTRRPRGRPAGSKNKPKPPVIVTRDSPYAMRSLVLEVPAGYDVVESISSYATRRRHGVC 120

Query: 121 ILGGTGAVTNVNLRQPMSPSGSVMTLHGTFEIVSLTGTALPPSGAGGLTIYL--ADRQRQ 180
           ILGGTGAVTNV LRQP +PSG+ M+  GTFEIVSLTGTALP SGAGGLTIYL     QR+
Sbjct: 121 ILGGTGAVTNVKLRQPAAPSGTAMSFRGTFEIVSLTGTALPSSGAGGLTIYLTGGPGQRE 180

Query: 181 GHVVGGSVVGPLRASSPVTLMVASFTNAVYDRLPVEEAEPPVQAQASASPSS 220
           G V+GGSV+GPL ASSPV LMVASFTNAV DRLP +EAEPPVQ   S S SS
Sbjct: 181 GQVIGGSVLGPLTASSPVILMVASFTNAVSDRLPPDEAEPPVQVHPSTSSSS 232

[Close]

BLAST of Csa7G029400 vs. NCBI nr
Match: gi|590689024|ref|XP_007043111.1| (AT-hook DNA-binding family protein, putative [Theobroma cacao])

HSP 1 Score: 279.6 bits (714), Expect = 4.7e-72
Identity = 151/241 (62.66%), Postives = 177/241 (73.44%), Query Frame = 1


Query: 1   MSDLNSAVHGASSRNANQFLGSDLQLQNFSQTHL--------------PDPNSADSTTPT 60
           MS L S   G+ SR  +Q LG +LQLQ  SQ HL               +   AD+ T +
Sbjct: 1   MSGLES---GSGSRYVHQLLGPELQLQRSSQPHLNVSQLTDSKQSPETEEGTDADAATTS 60

Query: 61  TGGSS-SRRPRGRPAGSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTYVTRRR 120
           +GG++  RRPRGRPAGSKNKPKPP+I+TRDSPN+LRSHVLE++ GSD+V+S+S Y  RR 
Sbjct: 61  SGGTTPGRRPRGRPAGSKNKPKPPIIITRDSPNALRSHVLEITSGSDIVDSVSNYARRRG 120

Query: 121 YGVCILGGTGAVTNVNLRQPMSPSGSVMTLHGTFEIVSLTGTALP---PSGAGGLTIYLA 180
            GVC+L GTGAVTNV LRQP +P+GSV+TLHG FEI+SLTGT+LP   P GAGGLTIYLA
Sbjct: 121 RGVCVLSGTGAVTNVTLRQPAAPAGSVVTLHGRFEILSLTGTSLPPPAPPGAGGLTIYLA 180

Query: 181 DRQRQGHVVGGSVVGPLRASSPVTLMVASFTNAVYDRLPVEEAEPPVQAQASASPSSDIT 224
               QG VVGGSV GPL AS PV LM ASF NAVYDRLPVEE EPPVQ Q +AS SS++T
Sbjct: 181 G--GQGQVVGGSVAGPLMASGPVVLMAASFANAVYDRLPVEEEEPPVQVQPAASQSSEVT 236

The following BLAST results are available for this feature:

BLAST of Csa7G029400 vs. Swiss-Prot


Match Name	E-value	Identity	Description
AHL25_ARATH	5.8e-62	58.05	AT-hook motif nuclear-localized protein 25 OS=Arabidopsis thaliana GN=AHL25 PE=1...	[more]
AHL27_ARATH	3.3e-57	58.37	AT-hook motif nuclear-localized protein 27 OS=Arabidopsis thaliana GN=AHL27 PE=1...	[more]
AHL22_ARATH	9.2e-52	54.37	AT-hook motif nuclear-localized protein 22 OS=Arabidopsis thaliana GN=AHL22 PE=1...	[more]
AHL29_ARATH	2.1e-51	59.44	AT-hook motif nuclear-localized protein 29 OS=Arabidopsis thaliana GN=AHL29 PE=1...	[more]
AHL26_ARATH	1.3e-50	59.76	AT-hook motif nuclear-localized protein 26 OS=Arabidopsis thaliana GN=AHL26 PE=2...	[more]

BLAST of Csa7G029400 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K104_CUCSA	1.2e-122	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G029400 PE=4 SV=1	[more]
A0A061E2S5_THECC	3.3e-72	62.66	AT-hook DNA-binding family protein, putative OS=Theobroma cacao GN=TCM_007603 PE...	[more]
A0A0D2PX98_GOSRA	6.4e-68	63.20	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G215400 PE=4 SV=1	[more]
A0A0D2V556_GOSRA	3.2e-67	62.72	Uncharacterized protein OS=Gossypium raimondii GN=B456_012G138000 PE=4 SV=1	[more]
F6I0P7_VITVI	2.1e-63	61.47	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0038g04110 PE=4 SV=...	[more]

BLAST of Csa7G029400 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G35390.1	3.3e-63	58.05	AT-hook protein of GA feedback 1	[more]
AT1G20900.1	1.8e-58	58.37	Predicted AT-hook DNA-binding family protein	[more]
AT2G45430.1	5.2e-53	54.37	AT-hook motif nuclear-localized protein 22	[more]
AT1G76500.1	1.2e-52	59.44	Predicted AT-hook DNA-binding family protein	[more]
AT4G12050.1	7.5e-52	59.76	Predicted AT-hook DNA-binding family protein	[more]

BLAST of Csa7G029400 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700188142\|gb\|KGN43375.1\|	1.7e-122	100.00	hypothetical protein Csa_7G029400 [Cucumis sativus]	[more]
gi\|449453768\|ref\|XP_004144628.1\|	9.4e-121	100.00	PREDICTED: AT-hook motif nuclear-localized protein 25-like [Cucumis sativus]	[more]
gi\|659100615\|ref\|XP_008451184.1\|	4.0e-87	74.79	PREDICTED: putative DNA-binding protein ESCAROLA isoform X2 [Cucumis melo]	[more]
gi\|659100613\|ref\|XP_008451183.1\|	5.2e-87	75.43	PREDICTED: putative DNA-binding protein ESCAROLA isoform X1 [Cucumis melo]	[more]
gi\|590689024\|ref\|XP_007043111.1\|	4.7e-72	62.66	AT-hook DNA-binding family protein, putative [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005175	PPC_dom
IPR014476	AT-hook_nuclear

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005488	binding
molecular_function	GO:0003680	AT DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa7G029400.1	Csa7G029400.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005175	PPC domain	PFAM	PF03479	DUF296	coord: 81..193 score: 7.6
IPR005175	PPC domain	PROFILE	PS51742	PPC	coord: 77..213 score: 32
IPR014476	AT-hook motif nuclear-localised protein	PIR	PIRSF016021	ESCAROLA	coord: 2..224 score: 9.2
None	No IPR available	GENE3D	G3DSA:3.30.1330.80		coord: 80..206 score: 1.7
None	No IPR available	PANTHER	PTHR31100	FAMILY NOT NAMED	coord: 36..223 score: 2.4
None	No IPR available	PANTHER	PTHR31100:SF16	AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 25	coord: 36..223 score: 2.4
None	No IPR available	unknown	SSF117856	AF0104/ALDC/Ptd012-like	coord: 77..208 score: 6.02

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa7G029400	Cla015722	Watermelon (97103) v1	cuwmB604
Csa7G029400	MELO3C015690	Melon (DHL92) v3.5.1	cumeB536
Csa7G029400	ClCG02G003210	Watermelon (Charleston Gray)	cuwcgB546
Csa7G029400	Lsi11G013130	Bottle gourd (USVL1VR-Ls)	culsiB494
Csa7G029400	MELO3C015690.2	Melon (DHL92) v3.6.1	cumedB516
Csa7G029400	Cla97C02G029750	Watermelon (97103) v2	cuwmbB529
Csa7G029400	CSPI07G02320	Wild cucumber (PI 183967)	cpicuB354
Csa7G029400	Cucsa.099950	Cucumber (Gy14) v1	cgycuB111
Csa7G029400	CsGy7G002030	Cucumber (Gy14) v2	cgybcuB324

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa7G029400	Cucurbita pepo (Zucchini)	cpecuB257
Csa7G029400	Cucurbita pepo (Zucchini)	cpecuB298
Csa7G029400	Cucurbita pepo (Zucchini)	cpecuB690
Csa7G029400	Bottle gourd (USVL1VR-Ls)	culsiB488
Csa7G029400	Cucumber (Gy14) v2	cgybcuB291
Csa7G029400	Melon (DHL92) v3.6.1	cumedB496
Csa7G029400	Silver-seed gourd	carcuB0228
Csa7G029400	Silver-seed gourd	carcuB0384
Csa7G029400	Silver-seed gourd	carcuB0872
Csa7G029400	Silver-seed gourd	carcuB1081
Csa7G029400	Watermelon (97103) v2	cuwmbB533
Csa7G029400	Wax gourd	cuwgoB670
Csa7G029400	Cucumber (Chinese Long) v2	cucuB151
Csa7G029400	Cucumber (Chinese Long) v2	cucuB171
Csa7G029400	Cucumber (Gy14) v1	cgycuB156
Csa7G029400	Cucurbita maxima (Rimu)	cmacuB151
Csa7G029400	Cucurbita maxima (Rimu)	cmacuB527
Csa7G029400	Cucurbita maxima (Rimu)	cmacuB576
Csa7G029400	Cucurbita moschata (Rifu)	cmocuB132
Csa7G029400	Cucurbita moschata (Rifu)	cmocuB518
Csa7G029400	Cucurbita moschata (Rifu)	cmocuB565
Csa7G029400	Melon (DHL92) v3.5.1	cumeB517
Csa7G029400	Watermelon (Charleston Gray)	cuwcgB550