Csa7G027850 (gene) Cucumber (Chinese Long) v2

NameCsa7G027850
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 1502328 .. 1502937 (-)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCAGATATCCATTCTTCATCCTTAGCCGCAAAGATATTAAATGTTTGAAGAAGGACCAAATAGTAGACTATCATAGCTACGAAACCAGCCATTTCAGAAGAATACAAGGCCTCGAAGAAGCCTGTGCTGTGTATGAATGAACTCAAAATGAGGTATATTTCCTTTAGAAATTTGATTTTTTTTTTCCCCTTTAAGAAAAGCACCCCTCTGCCTTCTTTTTCAGTATTCTCCTAATTTCTCGCTGAAATGATAGCAAGGAAGAGCGCAAGCCTCTTTGATTGCTGGAACACTATTCTAAAAAACAAAAAAGAGAATAAACTTTGACAAACCTCTAATTTTTATAGCCCTTTGTTCACATTGGTGGCGCTTTTAACGATGCAAAAGACTAGTCTTCTTATTTTGCCGATAATTGGGGGGACTGAAAGAAGCAAATTTGGAGGGTTCCGTTTTAGCCATTATCAATGTGGGAAGAGCTTGAGGCTTGATGTCAATGGCGGCAGATGCAGAGAGGAAATCCACCCATAAGAAACAGGTATGTGTGTTTTCTCTTTCTCTTTGTATATTAAATTTAACTTTAAAGAGATGCCTTGAAATAAAAGAATAGAAAGAG

mRNA sequence

ATGAATGAACTCAAAATGAGCCCTTTGTTCACATTGGTGGCGCTTTTAACGATGCAAAAGACTAGTCTTCTTATTTTGCCGATAATTGGGGGGACTGAAAGAAGCAAATTTGGAGGGTTCCGTTTTAGCCATTATCAATGTGGGAAGAGCTTGAGGCTTGATGTCAATGGCGGCAGATGCAGAGAGGAAATCCACCCATAA

Coding sequence (CDS)

ATGAATGAACTCAAAATGAGCCCTTTGTTCACATTGGTGGCGCTTTTAACGATGCAAAAGACTAGTCTTCTTATTTTGCCGATAATTGGGGGGACTGAAAGAAGCAAATTTGGAGGGTTCCGTTTTAGCCATTATCAATGTGGGAAGAGCTTGAGGCTTGATGTCAATGGCGGCAGATGCAGAGAGGAAATCCACCCATAA

Protein sequence

MNELKMSPLFTLVALLTMQKTSLLILPIIGGTERSKFGGFRFSHYQCGKSLRLDVNGGRCREEIHP*
BLAST of Csa7G027850 vs. TrEMBL
Match: A0A0A0K1M9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G027850 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 7.8e-30
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 1

Query: 1  MNELKMSPLFTLVALLTMQKTSLLILPIIGGTERSKFGGFRFSHYQCGKSLRLDVNGGRC 60
          MNELKMSPLFTLVALLTMQKTSLLILPIIGGTERSKFGGFRFSHYQCGKSLRLDVNGGRC
Sbjct: 1  MNELKMSPLFTLVALLTMQKTSLLILPIIGGTERSKFGGFRFSHYQCGKSLRLDVNGGRC 60

Query: 61 REEIHP 67
          REEIHP
Sbjct: 61 REEIHP 66

BLAST of Csa7G027850 vs. NCBI nr
Match: gi|700188135|gb|KGN43368.1| (hypothetical protein Csa_7G027850 [Cucumis sativus])

HSP 1 Score: 137.1 bits (344), Expect = 1.1e-29
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 1

Query: 1  MNELKMSPLFTLVALLTMQKTSLLILPIIGGTERSKFGGFRFSHYQCGKSLRLDVNGGRC 60
          MNELKMSPLFTLVALLTMQKTSLLILPIIGGTERSKFGGFRFSHYQCGKSLRLDVNGGRC
Sbjct: 1  MNELKMSPLFTLVALLTMQKTSLLILPIIGGTERSKFGGFRFSHYQCGKSLRLDVNGGRC 60

Query: 61 REEIHP 67
          REEIHP
Sbjct: 61 REEIHP 66

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0K1M9_CUCSA7.8e-30100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G027850 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700188135|gb|KGN43368.1|1.1e-29100.00hypothetical protein Csa_7G027850 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU129081cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G027850.1Csa7G027850.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU129081CU129081transcribed_cluster