Csa7G019880 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAAGAAACTATGGAGCTATTTGGGATACAAATAAAGTTCCAGAAGGAGCGATAAAGCTAGTGGTGATTGTAGTTTCAGGTTACAAAAATGGAAGAGGGATAATGATAAATTATGCACTTCCTGCTGATTGGAAAACTGGAGAGATTTATGATACTGGAATTCAAATCAAAGATATCGCTACTGAAGCTTGCAATCCTTGGAGATGTGGTGACCAACCATGGAATTAA ATGAGAAGAAACTATGGAGCTATTTGGGATACAAATAAAGTTCCAGAAGGAGCGATAAAGCTAGTGGTGATTGTAGTTTCAGGTTACAAAAATGGAAGAGGGATAATGATAAATTATGCACTTCCTGCTGATTGGAAAACTGGAGAGATTTATGATACTGGAATTCAAATCAAAGATATCGCTACTGAAGCTTGCAATCCTTGGAGATGTGGTGACCAACCATGGAATTAA ATGAGAAGAAACTATGGAGCTATTTGGGATACAAATAAAGTTCCAGAAGGAGCGATAAAGCTAGTGGTGATTGTAGTTTCAGGTTACAAAAATGGAAGAGGGATAATGATAAATTATGCACTTCCTGCTGATTGGAAAACTGGAGAGATTTATGATACTGGAATTCAAATCAAAGATATCGCTACTGAAGCTTGCAATCCTTGGAGATGTGGTGACCAACCATGGAATTAA MRRNYGAIWDTNKVPEGAIKLVVIVVSGYKNGRGIMINYALPADWKTGEIYDTGIQIKDIATEACNPWRCGDQPWN*
BLAST of Csa7G019880 vs. Swiss-Prot
Match: EXLA2_ARATH (Expansin-like A2 OS=Arabidopsis thaliana GN=EXLA2 PE=2 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 5.8e-14 Identity = 35/76 (46.05%), Postives = 50/76 (65.79%), Query Frame = 1
BLAST of Csa7G019880 vs. Swiss-Prot
Match: EXLA1_ARATH (Expansin-like A1 OS=Arabidopsis thaliana GN=EXLA1 PE=2 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 1.7e-13 Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = 1
BLAST of Csa7G019880 vs. Swiss-Prot
Match: EXLA3_ARATH (Expansin-like A3 OS=Arabidopsis thaliana GN=EXLA3 PE=2 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 5.4e-12 Identity = 35/76 (46.05%), Postives = 46/76 (60.53%), Query Frame = 1
BLAST of Csa7G019880 vs. Swiss-Prot
Match: EXLA2_ORYSJ (Expansin-like A2 OS=Oryza sativa subsp. japonica GN=EXLA2 PE=2 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 1.9e-09 Identity = 30/76 (39.47%), Postives = 41/76 (53.95%), Query Frame = 1
BLAST of Csa7G019880 vs. Swiss-Prot
Match: EXLA1_ORYSJ (Expansin-like A1 OS=Oryza sativa subsp. japonica GN=EXLA1 PE=2 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 1.2e-08 Identity = 29/76 (38.16%), Postives = 41/76 (53.95%), Query Frame = 1
BLAST of Csa7G019880 vs. TrEMBL
Match: A0A0A0K1H0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G019880 PE=4 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 4.7e-39 Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1
BLAST of Csa7G019880 vs. TrEMBL
Match: A0A0A0K645_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G019860 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 4.2e-19 Identity = 42/75 (56.00%), Postives = 57/75 (76.00%), Query Frame = 1
BLAST of Csa7G019880 vs. TrEMBL
Match: A0A0A0K2Q2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G019840 PE=3 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 1.2e-18 Identity = 44/76 (57.89%), Postives = 54/76 (71.05%), Query Frame = 1
BLAST of Csa7G019880 vs. TrEMBL
Match: A0A0A0K1G6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G019830 PE=3 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 1.2e-18 Identity = 42/75 (56.00%), Postives = 57/75 (76.00%), Query Frame = 1
BLAST of Csa7G019880 vs. TrEMBL
Match: A0A0A0LXL8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G637440 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 6.0e-18 Identity = 44/75 (58.67%), Postives = 52/75 (69.33%), Query Frame = 1
BLAST of Csa7G019880 vs. TAIR10
Match: AT4G38400.1 (AT4G38400.1 expansin-like A2) HSP 1 Score: 77.8 bits (190), Expect = 3.3e-15 Identity = 35/76 (46.05%), Postives = 50/76 (65.79%), Query Frame = 1
BLAST of Csa7G019880 vs. TAIR10
Match: AT3G45970.1 (AT3G45970.1 expansin-like A1) HSP 1 Score: 76.3 bits (186), Expect = 9.5e-15 Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = 1
BLAST of Csa7G019880 vs. TAIR10
Match: AT3G45960.2 (AT3G45960.2 expansin-like A3) HSP 1 Score: 71.2 bits (173), Expect = 3.1e-13 Identity = 35/76 (46.05%), Postives = 46/76 (60.53%), Query Frame = 1
BLAST of Csa7G019880 vs. NCBI nr
Match: gi|449470768|ref|XP_004153088.1| (PREDICTED: expansin-like A1 [Cucumis sativus]) HSP 1 Score: 167.9 bits (424), Expect = 6.8e-39 Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1
BLAST of Csa7G019880 vs. NCBI nr
Match: gi|700188075|gb|KGN43308.1| (hypothetical protein Csa_7G019880 [Cucumis sativus]) HSP 1 Score: 167.9 bits (424), Expect = 6.8e-39 Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1
BLAST of Csa7G019880 vs. NCBI nr
Match: gi|659094112|ref|XP_008447890.1| (PREDICTED: expansin-like A2 isoform X1 [Cucumis melo]) HSP 1 Score: 164.1 bits (414), Expect = 9.8e-38 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1
BLAST of Csa7G019880 vs. NCBI nr
Match: gi|659094114|ref|XP_008447891.1| (PREDICTED: expansin-like A2 isoform X2 [Cucumis melo]) HSP 1 Score: 164.1 bits (414), Expect = 9.8e-38 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1
BLAST of Csa7G019880 vs. NCBI nr
Match: gi|659094529|ref|XP_008448110.1| (PREDICTED: expansin-like A1 [Cucumis melo]) HSP 1 Score: 111.3 bits (277), Expect = 7.5e-22 Identity = 47/75 (62.67%), Postives = 61/75 (81.33%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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