Csa7G009090 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G009090
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 538597 .. 538887 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTATATAGTCTAGGAATTATCTGCATGAATGCTATCTCCCTTATGATGGGATTAGGTAGTAGGGTAGAGCTGCAGGCCATGTACATATGACAGAGGCCACTGACTTGTTTAGGTCTGTCTGAACTTGTAACATTCATATTTATTTCATTGAACTTCAGCTGGCAGGCAAAGCCACGTGGTTCACTCTTATCTCTGTCCTTCACTGGGCCCAATTGGCTGATTTCCTCTCCACCACTTGTTGCTCAAGAGTTAAGGAGAACCGAAATATTTCATCTTGTGTATATATAG

mRNA sequence

ATGTTATATAGTCTAGGAATTATCTGCATGAATGCTATCTCCCTTATGATGGGATTAGGTAGTAGGGTAGAGCTGCAGGCCATCTGGCAGGCAAAGCCACGTGGTTCACTCTTATCTCTGTCCTTCACTGGGCCCAATTGGCTGATTTCCTCTCCACCACTTGTTGCTCAAGAGTTAAGGAGAACCGAAATATTTCATCTTGTGTATATATAG

Coding sequence (CDS)

ATGTTATATAGTCTAGGAATTATCTGCATGAATGCTATCTCCCTTATGATGGGATTAGGTAGTAGGGTAGAGCTGCAGGCCATCTGGCAGGCAAAGCCACGTGGTTCACTCTTATCTCTGTCCTTCACTGGGCCCAATTGGCTGATTTCCTCTCCACCACTTGTTGCTCAAGAGTTAAGGAGAACCGAAATATTTCATCTTGTGTATATATAG

Protein sequence

MLYSLGIICMNAISLMMGLGSRVELQAIWQAKPRGSLLSLSFTGPNWLISSPPLVAQELRRTEIFHLVYI*
Homology
[Close]
BLAST of Csa7G009090 vs. TrEMBL
Match: A0A0A0K168_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G009090 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 3.3e-31
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 1 

Query: 1  MLYSLGIICMNAISLMMGLGSRVELQAIWQAKPRGSLLSLSFTGPNWLISSPPLVAQELR 60
          MLYSLGIICMNAISLMMGLGSRVELQAIWQAKPRGSLLSLSFTGPNWLISSPPLVAQELR
Sbjct: 1  MLYSLGIICMNAISLMMGLGSRVELQAIWQAKPRGSLLSLSFTGPNWLISSPPLVAQELR 60

Query: 61 RTEIFHLVYI 71
          RTEIFHLVYI
Sbjct: 61 RTEIFHLVYI 70

[Close]
BLAST of Csa7G009090 vs. NCBI nr
Match: gi|700187980|gb|KGN43213.1| (hypothetical protein Csa_7G009090 [Cucumis sativus])

HSP 1 Score: 141.7 bits (356), Expect = 4.8e-31
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 1 

Query: 1  MLYSLGIICMNAISLMMGLGSRVELQAIWQAKPRGSLLSLSFTGPNWLISSPPLVAQELR 60
          MLYSLGIICMNAISLMMGLGSRVELQAIWQAKPRGSLLSLSFTGPNWLISSPPLVAQELR
Sbjct: 1  MLYSLGIICMNAISLMMGLGSRVELQAIWQAKPRGSLLSLSFTGPNWLISSPPLVAQELR 60

Query: 61 RTEIFHLVYI 71
          RTEIFHLVYI
Sbjct: 61 RTEIFHLVYI 70

The following BLAST results are available for this feature:
BLAST of Csa7G009090 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K168_CUCSA3.3e-31100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G009090 PE=4 SV=1[more]
BLAST of Csa7G009090 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700187980|gb|KGN43213.1|4.8e-31100.00hypothetical protein Csa_7G009090 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G009090.1Csa7G009090.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa7G009090ClCG02G004400Watermelon (Charleston Gray)cuwcgB546
Csa7G009090CsGy7G000530Cucumber (Gy14) v2cgybcuB324
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G009090Cucumber (Chinese Long) v2cucuB077
Csa7G009090Cucumber (Chinese Long) v2cucuB080
Csa7G009090Cucumber (Gy14) v1cgycuB243
Csa7G009090Cucumber (Gy14) v1cgycuB258
Csa7G009090Cucumber (Gy14) v1cgycuB535
Csa7G009090Cucurbita maxima (Rimu)cmacuB151
Csa7G009090Cucurbita maxima (Rimu)cmacuB527
Csa7G009090Cucurbita maxima (Rimu)cmacuB573
Csa7G009090Cucurbita maxima (Rimu)cmacuB644
Csa7G009090Cucurbita moschata (Rifu)cmocuB132
Csa7G009090Cucurbita moschata (Rifu)cmocuB518
Csa7G009090Cucurbita moschata (Rifu)cmocuB561
Csa7G009090Cucurbita moschata (Rifu)cmocuB633
Csa7G009090Melon (DHL92) v3.5.1cumeB515
Csa7G009090Melon (DHL92) v3.5.1cumeB531
Csa7G009090Melon (DHL92) v3.5.1cumeB550
Csa7G009090Watermelon (97103) v1cuwmB577
Csa7G009090Watermelon (97103) v1cuwmB604
Csa7G009090Watermelon (97103) v1cuwmB609
Csa7G009090Cucurbita pepo (Zucchini)cpecuB257
Csa7G009090Cucurbita pepo (Zucchini)cpecuB690
Csa7G009090Bottle gourd (USVL1VR-Ls)culsiB489
Csa7G009090Bottle gourd (USVL1VR-Ls)culsiB494
Csa7G009090Cucumber (Gy14) v2cgybcuB089
Csa7G009090Melon (DHL92) v3.6.1cumedB495
Csa7G009090Melon (DHL92) v3.6.1cumedB510
Csa7G009090Melon (DHL92) v3.6.1cumedB527
Csa7G009090Silver-seed gourdcarcuB0159
Csa7G009090Silver-seed gourdcarcuB0342
Csa7G009090Silver-seed gourdcarcuB1035
Csa7G009090Watermelon (97103) v2cuwmbB519
Csa7G009090Watermelon (97103) v2cuwmbB529
Csa7G009090Wax gourdcuwgoB670
Csa7G009090Wax gourdcuwgoB681