Csa6G509720 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G509720
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 26181416 .. 26181699 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAATGGAGGGTGAGGAGTGGCAAAAAGAGATGTCGTCATTGTCTGAAAAGAAGACAGCGAGAGTCAGTGGTGGGTGGTGTGGAGAAAGGAGTGCCTTTGGTGACCATCATACGCTGACGGACCAATCAGATAGGAGAACTAGAAAAATATTAGAAGTTAATTTTTTTTTTAAAAAAAAGGGGTATCCACGTGTCCATCTTTTGCTGGACGACACGTGTTGGTTGTTGCGCTCACCATTCCTGCCAACCCTATCCAGCTGTCACCCTTGTTCACGCTATAA

mRNA sequence

ATGGAAATGGAGGGTGAGGAGTGGCAAAAAGAGATGTCGTCATTGTCTGAAAAGAAGACAGCGAGAGTCAGTGGTGGGTGGTGTGGAGAAAGGAGTGCCTTTGGGGTATCCACGTGTCCATCTTTTGCTGGACGACACGTGTTGGTTGTTGCGCTCACCATTCCTGCCAACCCTATCCAGCTGTCACCCTTGTTCACGCTATAA

Coding sequence (CDS)

ATGGAAATGGAGGGTGAGGAGTGGCAAAAAGAGATGTCGTCATTGTCTGAAAAGAAGACAGCGAGAGTCAGTGGTGGGTGGTGTGGAGAAAGGAGTGCCTTTGGGGTATCCACGTGTCCATCTTTTGCTGGACGACACGTGTTGGTTGTTGCGCTCACCATTCCTGCCAACCCTATCCAGCTGTCACCCTTGTTCACGCTATAA

Protein sequence

MEMEGEEWQKEMSSLSEKKTARVSGGWCGERSAFGVSTCPSFAGRHVLVVALTIPANPIQLSPLFTL*
Homology
[Close]
BLAST of Csa6G509720 vs. TrEMBL
Match: A0A0A0KHM1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G509720 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 1.6e-30
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 1 

Query: 1  MEMEGEEWQKEMSSLSEKKTARVSGGWCGERSAFGVSTCPSFAGRHVLVVALTIPANPIQ 60
          MEMEGEEWQKEMSSLSEKKTARVSGGWCGERSAFGVSTCPSFAGRHVLVVALTIPANPIQ
Sbjct: 1  MEMEGEEWQKEMSSLSEKKTARVSGGWCGERSAFGVSTCPSFAGRHVLVVALTIPANPIQ 60

Query: 61 LSPLFTL 68
          LSPLFTL
Sbjct: 61 LSPLFTL 67

[Close]
BLAST of Csa6G509720 vs. NCBI nr
Match: gi|700193799|gb|KGN49003.1| (hypothetical protein Csa_6G509720 [Cucumis sativus])

HSP 1 Score: 139.4 bits (350), Expect = 2.3e-30
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 1 

Query: 1  MEMEGEEWQKEMSSLSEKKTARVSGGWCGERSAFGVSTCPSFAGRHVLVVALTIPANPIQ 60
          MEMEGEEWQKEMSSLSEKKTARVSGGWCGERSAFGVSTCPSFAGRHVLVVALTIPANPIQ
Sbjct: 1  MEMEGEEWQKEMSSLSEKKTARVSGGWCGERSAFGVSTCPSFAGRHVLVVALTIPANPIQ 60

Query: 61 LSPLFTL 68
          LSPLFTL
Sbjct: 61 LSPLFTL 67

The following BLAST results are available for this feature:
BLAST of Csa6G509720 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KHM1_CUCSA1.6e-30100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G509720 PE=4 SV=1[more]
BLAST of Csa6G509720 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700193799|gb|KGN49003.1|2.3e-30100.00hypothetical protein Csa_6G509720 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G509720.1Csa6G509720.1mRNA