Csa6G506020 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G506020
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 25842647 .. 25842966 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTTTTCTTCGTTCTGGCCAAACCTCTTGTGGCCTATCAATCTATCAAATAGTTTATTTTAGCCAGTCCGATAGCTACTCTTCTGATTTGGCTTGGAAACAAGGTTTTTGCTTGCAGTCACTGGCGGAGCCTCTTCAACTGTTTGTTATCTAGTGTTCTTGATGCTGTTTTGATCTTTATGGGCCTGCTATTTGTACTTTGTGTTTAGGGATGGAACATTTCACCCCAAACTGGTGGGGTGGTGGTGTCTCATATGGATGCCCTTAAGCTTATGGTCCTACAGCCAAGGCATCGTCCTTAAAGGTTGTCTTGTCTAA

mRNA sequence

ATGATTTTTCTTCGTTCTGGCCAAACCTCTTGTGGCCTATCAATCTATCAAATAGTTTATTTTAGCCAGTCCGATAGCTACTCTTCTGATTTGGCTTGGAAACAAGGTTTTTGCTTGCAGTCACTGGCGGAGCCTCTTCAACTGGATGGAACATTTCACCCCAAACTGGTGGGGTGGTGGTGTCTCATATGGATGCCCTTAAGCTTATGGTCCTACAGCCAAGGCATCGTCCTTAAAGGTTGTCTTGTCTAA

Coding sequence (CDS)

ATGATTTTTCTTCGTTCTGGCCAAACCTCTTGTGGCCTATCAATCTATCAAATAGTTTATTTTAGCCAGTCCGATAGCTACTCTTCTGATTTGGCTTGGAAACAAGGTTTTTGCTTGCAGTCACTGGCGGAGCCTCTTCAACTGGATGGAACATTTCACCCCAAACTGGTGGGGTGGTGGTGTCTCATATGGATGCCCTTAAGCTTATGGTCCTACAGCCAAGGCATCGTCCTTAAAGGTTGTCTTGTCTAA

Protein sequence

MIFLRSGQTSCGLSIYQIVYFSQSDSYSSDLAWKQGFCLQSLAEPLQLDGTFHPKLVGWWCLIWMPLSLWSYSQGIVLKGCLV*
Homology
[Close]
BLAST of Csa6G506020 vs. TrEMBL
Match: A0A0A0KGP4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G506020 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.0e-42
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 1 

Query: 1  MIFLRSGQTSCGLSIYQIVYFSQSDSYSSDLAWKQGFCLQSLAEPLQLDGTFHPKLVGWW 60
          MIFLRSGQTSCGLSIYQIVYFSQSDSYSSDLAWKQGFCLQSLAEPLQLDGTFHPKLVGWW
Sbjct: 1  MIFLRSGQTSCGLSIYQIVYFSQSDSYSSDLAWKQGFCLQSLAEPLQLDGTFHPKLVGWW 60

Query: 61 CLIWMPLSLWSYSQGIVLKGCLV 84
          CLIWMPLSLWSYSQGIVLKGCLV
Sbjct: 61 CLIWMPLSLWSYSQGIVLKGCLV 83

[Close]
BLAST of Csa6G506020 vs. NCBI nr
Match: gi|700193721|gb|KGN48925.1| (hypothetical protein Csa_6G506020 [Cucumis sativus])

HSP 1 Score: 180.3 bits (456), Expect = 1.4e-42
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 1 

Query: 1  MIFLRSGQTSCGLSIYQIVYFSQSDSYSSDLAWKQGFCLQSLAEPLQLDGTFHPKLVGWW 60
          MIFLRSGQTSCGLSIYQIVYFSQSDSYSSDLAWKQGFCLQSLAEPLQLDGTFHPKLVGWW
Sbjct: 1  MIFLRSGQTSCGLSIYQIVYFSQSDSYSSDLAWKQGFCLQSLAEPLQLDGTFHPKLVGWW 60

Query: 61 CLIWMPLSLWSYSQGIVLKGCLV 84
          CLIWMPLSLWSYSQGIVLKGCLV
Sbjct: 61 CLIWMPLSLWSYSQGIVLKGCLV 83

The following BLAST results are available for this feature:
BLAST of Csa6G506020 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KGP4_CUCSA1.0e-42100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G506020 PE=4 SV=1[more]
BLAST of Csa6G506020 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700193721|gb|KGN48925.1|1.4e-42100.00hypothetical protein Csa_6G506020 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G506020.1Csa6G506020.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa6G506020Cucumber (Chinese Long) v2cucuB067
Csa6G506020Cucumber (Chinese Long) v2cucuB112
Csa6G506020Cucumber (Chinese Long) v2cucuB119
Csa6G506020Cucumber (Gy14) v1cgycuB027
Csa6G506020Cucumber (Gy14) v1cgycuB462
Csa6G506020Cucurbita maxima (Rimu)cmacuB200
Csa6G506020Cucurbita maxima (Rimu)cmacuB681
Csa6G506020Cucurbita maxima (Rimu)cmacuB877
Csa6G506020Cucurbita moschata (Rifu)cmocuB181
Csa6G506020Cucurbita moschata (Rifu)cmocuB670
Csa6G506020Cucurbita moschata (Rifu)cmocuB865
Csa6G506020Melon (DHL92) v3.5.1cumeB453
Csa6G506020Melon (DHL92) v3.5.1cumeB485
Csa6G506020Melon (DHL92) v3.5.1cumeB495
Csa6G506020Melon (DHL92) v3.5.1cumeB503
Csa6G506020Watermelon (Charleston Gray)cuwcgB425
Csa6G506020Watermelon (Charleston Gray)cuwcgB432
Csa6G506020Watermelon (Charleston Gray)cuwcgB450
Csa6G506020Watermelon (Charleston Gray)cuwcgB512
Csa6G506020Watermelon (97103) v1cuwmB450
Csa6G506020Watermelon (97103) v1cuwmB473
Csa6G506020Watermelon (97103) v1cuwmB500
Csa6G506020Watermelon (97103) v1cuwmB524
Csa6G506020Cucurbita pepo (Zucchini)cpecuB085
Csa6G506020Cucurbita pepo (Zucchini)cpecuB228
Csa6G506020Cucurbita pepo (Zucchini)cpecuB286
Csa6G506020Cucurbita pepo (Zucchini)cpecuB503
Csa6G506020Cucurbita pepo (Zucchini)cpecuB585
Csa6G506020Bottle gourd (USVL1VR-Ls)culsiB411
Csa6G506020Bottle gourd (USVL1VR-Ls)culsiB434
Csa6G506020Bottle gourd (USVL1VR-Ls)culsiB451
Csa6G506020Bottle gourd (USVL1VR-Ls)culsiB468
Csa6G506020Bottle gourd (USVL1VR-Ls)culsiB484
Csa6G506020Cucumber (Gy14) v2cgybcuB080
Csa6G506020Cucumber (Gy14) v2cgybcuB144
Csa6G506020Cucumber (Gy14) v2cgybcuB281
Csa6G506020Melon (DHL92) v3.6.1cumedB433
Csa6G506020Melon (DHL92) v3.6.1cumedB465
Csa6G506020Melon (DHL92) v3.6.1cumedB476
Csa6G506020Melon (DHL92) v3.6.1cumedB483
Csa6G506020Silver-seed gourdcarcuB0381
Csa6G506020Silver-seed gourdcarcuB0441
Csa6G506020Silver-seed gourdcarcuB0663
Csa6G506020Silver-seed gourdcarcuB0996
Csa6G506020Watermelon (97103) v2cuwmbB412
Csa6G506020Watermelon (97103) v2cuwmbB420
Csa6G506020Watermelon (97103) v2cuwmbB440
Csa6G506020Watermelon (97103) v2cuwmbB503
Csa6G506020Wax gourdcuwgoB617
Csa6G506020Wax gourdcuwgoB628