Csa6G504410 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G504410
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionMetal ion binding protein, putative; contains IPR006121 (Heavy metal-associated domain, HMA)
LocationChr6 : 25470881 .. 25471444 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACAATTCCACAAGAATTTCAGAGAGAAATCCTCCATTATACTCTTTTTCCAATTTCCCATGGCCGTAACTAAAACCGTTATGAAACTTGATATTGCATGCCAAAAATGCAAAACCAAAGTTCTTAAAGCCGTTACCGCCATTGAAGGTACCTTTCTTCATCTTCTTCTTTGGATATATCATTATTAAACTCCTTAACTTCCATATAAATCTTTTATTTTCTTTATGAATTTTGTAAACTAACTATAGGTGTCGACAAGGTCGAGACAGATGAAGCTAAGGGAACTTTGGCTGTGATCGGCACGGCAGATCCATTTGAGATAGTTAAACGTACAAGAAAGGCGATTGCTTGTGCTGGCAAGGTCGCCGATGTAGTGAGCATTGGACCGCCACCCAAACCAGACGAGAAAAAACCGGAGGAGAAAAAACAGGAGGAGAAGAAACCAGTAGACAAGAAACCCGACCCGCCTCCTTGCCCATGTCCACCCTACCCCTGCCCACCTTATTATGGATCGTCCTATGTGATCGTACCCCATGAAACTTATCCTTCTTGCTCTATTCTTTAA

mRNA sequence

ATGGCCGTAACTAAAACCGTTATGAAACTTGATATTGCATGCCAAAAATGCAAAACCAAAGTTCTTAAAGCCGTTACCGCCATTGAAGGTGTCGACAAGGTCGAGACAGATGAAGCTAAGGGAACTTTGGCTGTGATCGGCACGGCAGATCCATTTGAGATAGTTAAACGTACAAGAAAGGCGATTGCTTGTGCTGGCAAGGTCGCCGATGTAGTGAGCATTGGACCGCCACCCAAACCAGACGAGAAAAAACCGGAGGAGAAAAAACAGGAGGAGAAGAAACCAGTAGACAAGAAACCCGACCCGCCTCCTTGCCCATGTCCACCCTACCCCTGCCCACCTTATTATGGATCGTCCTATGTGATCGTACCCCATGAAACTTATCCTTCTTGCTCTATTCTTTAA

Coding sequence (CDS)

ATGGCCGTAACTAAAACCGTTATGAAACTTGATATTGCATGCCAAAAATGCAAAACCAAAGTTCTTAAAGCCGTTACCGCCATTGAAGGTGTCGACAAGGTCGAGACAGATGAAGCTAAGGGAACTTTGGCTGTGATCGGCACGGCAGATCCATTTGAGATAGTTAAACGTACAAGAAAGGCGATTGCTTGTGCTGGCAAGGTCGCCGATGTAGTGAGCATTGGACCGCCACCCAAACCAGACGAGAAAAAACCGGAGGAGAAAAAACAGGAGGAGAAGAAACCAGTAGACAAGAAACCCGACCCGCCTCCTTGCCCATGTCCACCCTACCCCTGCCCACCTTATTATGGATCGTCCTATGTGATCGTACCCCATGAAACTTATCCTTCTTGCTCTATTCTTTAA

Protein sequence

MAVTKTVMKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVIGTADPFEIVKRTRKAIACAGKVADVVSIGPPPKPDEKKPEEKKQEEKKPVDKKPDPPPCPCPPYPCPPYYGSSYVIVPHETYPSCSIL*
Homology
[Close]
BLAST of Csa6G504410 vs. Swiss-Prot
Match: HIP3_ARATH (Heavy metal-associated isoprenylated plant protein 3 OS=Arabidopsis thaliana GN=HIPP3 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.3e-08
Identity = 39/108 (36.11%), Postives = 57/108 (52.78%), Query Frame = 1 

Query: 7   VMKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVIGTADPFEIVKRTRKAIACAG 66
           V+K+D+ C+ C ++++K V + +GV+ V+++ A G L V G  DP   VK   K      
Sbjct: 29  VLKVDMHCEGCASRIVKCVRSFQGVETVKSESATGKLTVTGALDP---VKLREKLEEKTK 88

Query: 67  KVADVVSIGPPPKPDEKK-------PEEKKQEEKKPV---DKKPDPPP 105
           K  D+VS  P PK +++K        ++KK EEKK     DKKP   P
Sbjct: 89  KKVDLVS--PQPKKEKEKENKNKNDEDKKKSEEKKKPDNNDKKPKETP 131

[Close]
BLAST of Csa6G504410 vs. TrEMBL
Match: A0A0A0KJ75_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G504410 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 2.3e-73
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 1 

Query: 1   MAVTKTVMKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVIGTADPFEIVKRTRK 60
           MAVTKTVMKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVIGTADPFEIVKRTRK
Sbjct: 1   MAVTKTVMKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVIGTADPFEIVKRTRK 60

Query: 61  AIACAGKVADVVSIGPPPKPDEKKPEEKKQEEKKPVDKKPDPPPCPCPPYPCPPYYGSSY 120
           AIACAGKVADVVSIGPPPKPDEKKPEEKKQEEKKPVDKKPDPPPCPCPPYPCPPYYGSSY
Sbjct: 61  AIACAGKVADVVSIGPPPKPDEKKPEEKKQEEKKPVDKKPDPPPCPCPPYPCPPYYGSSY 120

Query: 121 VIVPHETYPSCSIL 135
           VIVPHETYPSCSIL
Sbjct: 121 VIVPHETYPSCSIL 134

[Close]
BLAST of Csa6G504410 vs. TrEMBL
Match: B9HF42_POPTR (Heavy-metal-associated domain-containing family protein OS=Populus trichocarpa GN=POPTR_0007s13270g PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 2.5e-27
Identity = 74/142 (52.11%), Postives = 91/142 (64.08%), Query Frame = 1 

Query: 3   VTKTVMKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVIGTADPFEIVKRTRKAI 62
           V +TV+K+DI+CQKCKTKVLKAV+ +EGVD +E D+ KGTL V G ADP+EI+ RTRK  
Sbjct: 2   VQRTVLKVDISCQKCKTKVLKAVSTLEGVDTIEADQGKGTLTVTGNADPYEIILRTRK-- 61

Query: 63  ACAGKVADVVSIGPPPKP----DEKKPEEKKQEEKKPVDKKPDPPPCPCPPYPCPPYYGS 122
              GK A+VVSIGPPP P     +KK EEKK +EKK   K     PC CP   C P    
Sbjct: 62  --TGKHAEVVSIGPPPAPPKQDGQKKAEEKKPQEKKTEQKALIYDPCACP--QCQP---- 121

Query: 123 SYVIVP------HETYPSCSIL 135
             +++P       E  PSCSI+
Sbjct: 122 -VLLMPMPVGRCDEPNPSCSIM 132

[Close]
BLAST of Csa6G504410 vs. TrEMBL
Match: V7CFJ8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G033800g PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 3.3e-27
Identity = 76/144 (52.78%), Postives = 94/144 (65.28%), Query Frame = 1 

Query: 3   VTKTVMKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVIGTADPFEIVKRTRKAI 62
           V KTV+K+DI C KCK K+LK V++++GVDK+E DE KGTL V G ADP++I+ R RK  
Sbjct: 2   VKKTVLKVDITCVKCKRKLLKTVSSLQGVDKIEADEGKGTLTVTGDADPYDIIVRIRK-- 61

Query: 63  ACAGKVADVVSIGPPPKP---DEKKPEEKKQEEKKPVDKKPDP---PPCPCPPYPCPPYY 122
             AGK A+VVS+GPPP P   D+KKPEEKK +EK    KKPDP      P  PY   PYY
Sbjct: 62  --AGKHAEVVSVGPPPAPPKQDQKKPEEKKPDEK----KKPDPVKQEQKPNEPYMQMPYY 121

Query: 123 GSSY--VIVPHETY----PSCSIL 135
              +  V+V    Y    PSC+IL
Sbjct: 122 YPPHQPVVVYMNRYEEPNPSCTIL 137

[Close]
BLAST of Csa6G504410 vs. TrEMBL
Match: I1LHW0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G071500 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.6e-26
Identity = 73/136 (53.68%), Postives = 90/136 (66.18%), Query Frame = 1 

Query: 3   VTKTVMKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVIGTADPFEIVKRTRKAI 62
           V KTV+K+DI+C KCK K+LK V++I+GVDK+E DE KGTL V G ADP+EI+ R RK  
Sbjct: 2   VKKTVLKVDISCLKCKRKLLKIVSSIQGVDKIEADEGKGTLTVTGDADPYEIIVRIRK-- 61

Query: 63  ACAGKVADVVSIGPPPKP---DEKKPEEKKQEEKKPVDKKPDPPPCPCPPYPCPPYYG-S 122
             AGK A+VVS+GPP  P   DEKKPEEKK+ E +  D+KP        PY  PPY    
Sbjct: 62  --AGKHAEVVSVGPPQAPQKKDEKKPEEKKKPEAEKKDEKPKESSIHM-PYYYPPYQPVV 121

Query: 123 SYVIVPHETYPSCSIL 135
            Y+    E  PSC+IL
Sbjct: 122 LYMNRYEEPNPSCTIL 132

[Close]
BLAST of Csa6G504410 vs. TrEMBL
Match: A0A0B2S5G6_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_003686 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.6e-26
Identity = 73/136 (53.68%), Postives = 90/136 (66.18%), Query Frame = 1 

Query: 3   VTKTVMKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVIGTADPFEIVKRTRKAI 62
           V KTV+K+DI+C KCK K+LK V++I+GVDK+E DE KGTL V G ADP+EI+ R RK  
Sbjct: 2   VKKTVLKVDISCLKCKRKLLKIVSSIQGVDKIEADEGKGTLTVTGDADPYEIIVRIRK-- 61

Query: 63  ACAGKVADVVSIGPPPKP---DEKKPEEKKQEEKKPVDKKPDPPPCPCPPYPCPPYYG-S 122
             AGK A+VVS+GPP  P   DEKKPEEKK+ E +  D+KP        PY  PPY    
Sbjct: 62  --AGKHAEVVSVGPPQAPQKKDEKKPEEKKKPEAEKKDEKPKESSIHM-PYYYPPYQPVV 121

Query: 123 SYVIVPHETYPSCSIL 135
            Y+    E  PSC+IL
Sbjct: 122 LYMNRYEEPNPSCTIL 132

[Close]
BLAST of Csa6G504410 vs. TAIR10
Match: AT3G05920.1 (AT3G05920.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 94.4 bits (233), Expect = 5.9e-20
Identity = 55/138 (39.86%), Postives = 73/138 (52.90%), Query Frame = 1 

Query: 1   MAVTKTVMKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVIGTADPFEIVKRTRK 60
           M V K  +K+DI C KC + +++AVT IEGV+ +  DE    L V+GT DP  +  R +K
Sbjct: 1   MTVKKVEIKVDINCGKCNSAIMEAVTEIEGVNHISLDEGNSILTVVGTMDPVCVATRLKK 60

Query: 61  AIACAGKVADVVSIGPPPKPDEKKPEEKKQEEKKPVDKKPDPPPCPCPP-YPCPPYYGSS 120
                 +   ++S+GPPPKP E          K P  +KP PPP P PP + C P Y +S
Sbjct: 61  ----IKQKPVIISVGPPPKPPE--------PPKPPEPEKPKPPPAPEPPKHVCKPPYCNS 120

Query: 121 YVIVPHETYPS---CSIL 135
             +V   TY S   C+IL
Sbjct: 121 CDVVSVTTYESGSGCTIL 126

[Close]
BLAST of Csa6G504410 vs. TAIR10
Match: AT5G52740.1 (AT5G52740.1 Copper transport protein family)

HSP 1 Score: 74.3 bits (181), Expect = 6.3e-14
Identity = 41/110 (37.27%), Postives = 58/110 (52.73%), Query Frame = 1 

Query: 7   VMKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVIGTADPFEIVKRTRKAIACAG 66
           V+KLD+ C+K K K +  V  + GV+ VE  + K  L V G  D + IVK+ +K      
Sbjct: 5   VLKLDVHCEKTKQKAMSTVCCLSGVNSVEVKDGK--LTVTGEIDAYMIVKKLKKICH--- 64

Query: 67  KVADVVSIGPPPKPDEKKPEEKKQEEKKPVDKKPDPPPCPCPPYPCPPYY 117
              + +S+GP  +P++KKP++ K+ E KP D      P      PCPPYY
Sbjct: 65  --TEFISVGPVKEPEKKKPDDPKKPETKPPDVIYHYVP------PCPPYY 101

[Close]
BLAST of Csa6G504410 vs. TAIR10
Match: AT5G26690.1 (AT5G26690.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 73.6 bits (179), Expect = 1.1e-13
Identity = 38/89 (42.70%), Postives = 53/89 (59.55%), Query Frame = 1 

Query: 1  MAVTKTVMKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVIGTADPFEIVKRTRK 60
          M   K  +K+DI C+KCK  +++AVT +EGV+ V  D+ K  L V+GT DP  + ++ +K
Sbjct: 1  MTTKKIEIKVDIDCEKCKHAIMEAVTELEGVNIVSLDQEKSILTVVGTMDPVCVAEQLKK 60

Query: 61 AIACAGKVADVVSIGPPPKPDEKKPEEKK 90
                K   V+S+GPP KPD  KP+ KK
Sbjct: 61 ----INKKPVVISVGPPKKPD-PKPDPKK 84

[Close]
BLAST of Csa6G504410 vs. TAIR10
Match: AT1G01490.1 (AT1G01490.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 67.4 bits (163), Expect = 7.7e-12
Identity = 36/100 (36.00%), Postives = 52/100 (52.00%), Query Frame = 1 

Query: 5   KTVMKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVIGTADPFEIVKRTRKAIAC 64
           K V+KLD+   + K K LK V+ + G+D +  D  +  L VIGT DP  +V + RK    
Sbjct: 3   KIVLKLDLHDDRAKQKALKTVSTLPGIDSIAMDMKEKKLTVIGTVDPVNVVSKLRK---- 62

Query: 65  AGKVADVVSIGPPPKPDEKKPEEKKQEEKKPVDKKPDPPP 105
              + D+V +GP  +P+++K EE K+E      KK    P
Sbjct: 63  YWPMTDIVLVGPAKEPEKEKKEEPKKEGGGEPPKKEGEAP 98

[Close]
BLAST of Csa6G504410 vs. TAIR10
Match: AT3G07600.1 (AT3G07600.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 63.5 bits (153), Expect = 1.1e-10
Identity = 48/157 (30.57%), Postives = 70/157 (44.59%), Query Frame = 1 

Query: 5   KTVMKLDIACQKCKTKVLKAVTAIEGVDKVETD-EAKGTLAVIGT-ADPFEIVKRTRKAI 64
           K ++++ +     + K +K     +GV+ VE   + +  + V G   D   ++   RK +
Sbjct: 4   KILIRIAMTDDTTRAKAMKTAVQFKGVNAVEIKGDHRNQIEVTGVEVDMIALINTLRKKV 63

Query: 65  ACAGKVADVVSIGPPPKPD-----EKKPEEKKQEEKKPVDKKPD--------PPPC--PC 124
           A A ++  V  + PP   D     EKKPEEKK EEKKP +KKP+        P PC  P 
Sbjct: 64  AFA-ELVSVAKVEPPKDGDKKPEEEKKPEEKKPEEKKPEEKKPEPCCQPWQKPEPCYQPW 123

Query: 125 P----------PYPCPPYYGSSYVIVPHETYPSCSIL 135
           P          PYPC PY      +   +  P+C I+
Sbjct: 124 PHDGYGVPSSYPYPCDPYNQIGEPVYNQD--PNCRIM 157

[Close]
BLAST of Csa6G504410 vs. NCBI nr
Match: gi|778722481|ref|XP_011658496.1| (PREDICTED: uncharacterized protein LOC105436033 [Cucumis sativus])

HSP 1 Score: 282.7 bits (722), Expect = 3.3e-73
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 1 

Query: 1   MAVTKTVMKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVIGTADPFEIVKRTRK 60
           MAVTKTVMKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVIGTADPFEIVKRTRK
Sbjct: 1   MAVTKTVMKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVIGTADPFEIVKRTRK 60

Query: 61  AIACAGKVADVVSIGPPPKPDEKKPEEKKQEEKKPVDKKPDPPPCPCPPYPCPPYYGSSY 120
           AIACAGKVADVVSIGPPPKPDEKKPEEKKQEEKKPVDKKPDPPPCPCPPYPCPPYYGSSY
Sbjct: 61  AIACAGKVADVVSIGPPPKPDEKKPEEKKQEEKKPVDKKPDPPPCPCPPYPCPPYYGSSY 120

Query: 121 VIVPHETYPSCSIL 135
           VIVPHETYPSCSIL
Sbjct: 121 VIVPHETYPSCSIL 134

[Close]
BLAST of Csa6G504410 vs. NCBI nr
Match: gi|659080373|ref|XP_008440757.1| (PREDICTED: uncharacterized protein LOC103485075 [Cucumis melo])

HSP 1 Score: 251.9 bits (642), Expect = 6.3e-64
Identity = 120/135 (88.89%), Postives = 126/135 (93.33%), Query Frame = 1 

Query: 1   MAVTKTVMKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVIGTADPFEIVKRTRK 60
           MA TKTV+KLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAV GTADPFEIVKRTRK
Sbjct: 1   MAQTKTVLKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVTGTADPFEIVKRTRK 60

Query: 61  AIACAGKVADVVSIGPPPKPDEKKPEEKKQEEKKPVD-KKPDPPPCPCPPYPCPPYYGSS 120
           AIACAGK+ADVVSIGPPPKP EKKP+EKK+ +KKP D KKP+PPPCPCPPY CPPYYGSS
Sbjct: 61  AIACAGKIADVVSIGPPPKPGEKKPDEKKEGDKKPADPKKPEPPPCPCPPYHCPPYYGSS 120

Query: 121 YVIVPHETYPSCSIL 135
           YVIVP ETYP CSIL
Sbjct: 121 YVIVPRETYPPCSIL 135

[Close]
BLAST of Csa6G504410 vs. NCBI nr
Match: gi|743791725|ref|XP_011042132.1| (PREDICTED: uncharacterized protein LOC105137896 [Populus euphratica])

HSP 1 Score: 138.7 bits (348), Expect = 7.7e-30
Identity = 75/145 (51.72%), Postives = 95/145 (65.52%), Query Frame = 1 

Query: 5   KTVMKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVIGTADPFEIVKRTRKAIAC 64
           +TV+K+DI+C+KCK K+LKAV+ +EGVDK+E D+AKGTL V G ADP+EI+ RTRK    
Sbjct: 4   RTVLKVDISCEKCKKKLLKAVSTLEGVDKIEADQAKGTLTVTGNADPYEIIMRTRK---- 63

Query: 65  AGKVADVVSIGPPP---------KPDEKKPEEKKQEEKKPVDKKPDPPPCPCPPYPCPPY 124
            GK ADVVSIGPPP         KP EKKPEEKK EEKKP +KKP+       P+ C   
Sbjct: 64  TGKHADVVSIGPPPAPPKQDGQKKPQEKKPEEKKPEEKKPEEKKPEEKAQIHDPHTCHQC 123

Query: 125 YGSSYVIVP------HETYPSCSIL 135
                + +P      +E  PSCS++
Sbjct: 124 RQVYLMPMPMSMAPCYEPNPSCSVI 144

[Close]
BLAST of Csa6G504410 vs. NCBI nr
Match: gi|1009144833|ref|XP_015890015.1| (PREDICTED: uncharacterized protein LOC107424680 [Ziziphus jujuba])

HSP 1 Score: 135.2 bits (339), Expect = 8.6e-29
Identity = 71/134 (52.99%), Postives = 95/134 (70.90%), Query Frame = 1 

Query: 3   VTKTVMKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVIGTADPFEIVKRTRKAI 62
           V +TV+K+DIACQKCK K+LKAV+ +EGVDK+E D AKGTL V G ADP+EI+ RTRK  
Sbjct: 2   VQRTVLKVDIACQKCKKKLLKAVSGLEGVDKIEIDAAKGTLTVTGDADPYEIIVRTRK-- 61

Query: 63  ACAGKVADVVSIGPPPKPDEKKPEEKKQEEKKPVDKKPDPPPCPCPPYPCPPYYGSSYVI 122
             AGK+ +VVS+GPPP P +K+  +KK ++KKP +KK DP      P+ CP     ++V 
Sbjct: 62  --AGKIVEVVSVGPPPAP-QKQDAQKKPDDKKPEEKKLDPKADIHMPHNCPVCQRINFVQ 121

Query: 123 VP--HETYPSCSIL 135
           +   +E  PSCSI+
Sbjct: 122 LDRWNEPNPSCSIM 130

[Close]
BLAST of Csa6G504410 vs. NCBI nr
Match: gi|694426120|ref|XP_009340756.1| (PREDICTED: uncharacterized protein LOC103932830 [Pyrus x bretschneideri])

HSP 1 Score: 134.0 bits (336), Expect = 1.9e-28
Identity = 74/132 (56.06%), Postives = 92/132 (69.70%), Query Frame = 1 

Query: 3   VTKTVMKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVIGTADPFEIVKRTRKAI 62
           V +TV+K+DI CQKC+ K+LKAV+ +EGVDK+E D AKGTL V G  DP+EI+ RTRKA 
Sbjct: 2   VQRTVLKVDIHCQKCQRKLLKAVSVLEGVDKLEVDAAKGTLTVTGDCDPYEIIVRTRKAC 61

Query: 63  ACAGKVADVVSIGPPPKPDEKKPEEKKQEEKKPVDKKPDPPPCPCPPYPCPPYYGSSYVI 122
               K A+VVSIGPPPKP EKKPE+ K +EK   D+KP P P  CP  PC   +G   V 
Sbjct: 62  ----KYAEVVSIGPPPKPPEKKPEQTKPKEK---DRKPCPMPYYCPE-PC-QRWGIVRVD 121

Query: 123 VPHETYPSCSIL 135
             ++  PSCSI+
Sbjct: 122 PCYDHNPSCSIM 124

The following BLAST results are available for this feature:
BLAST of Csa6G504410 vs. Swiss-Prot
Match NameE-valueIdentityDescription
HIP3_ARATH1.3e-0836.11Heavy metal-associated isoprenylated plant protein 3 OS=Arabidopsis thaliana GN=... [more]
BLAST of Csa6G504410 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KJ75_CUCSA2.3e-73100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G504410 PE=4 SV=1[more]
B9HF42_POPTR2.5e-2752.11Heavy-metal-associated domain-containing family protein OS=Populus trichocarpa G... [more]
V7CFJ8_PHAVU3.3e-2752.78Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G033800g PE=4 SV=1[more]
I1LHW0_SOYBN1.6e-2653.68Uncharacterized protein OS=Glycine max GN=GLYMA_11G071500 PE=4 SV=1[more]
A0A0B2S5G6_GLYSO1.6e-2653.68Uncharacterized protein OS=Glycine soja GN=glysoja_003686 PE=4 SV=1[more]
BLAST of Csa6G504410 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G05920.15.9e-2039.86 Heavy metal transport/detoxification superfamily protein [more]
AT5G52740.16.3e-1437.27 Copper transport protein family[more]
AT5G26690.11.1e-1342.70 Heavy metal transport/detoxification superfamily protein [more]
AT1G01490.17.7e-1236.00 Heavy metal transport/detoxification superfamily protein [more]
AT3G07600.11.1e-1030.57 Heavy metal transport/detoxification superfamily protein [more]
BLAST of Csa6G504410 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778722481|ref|XP_011658496.1|3.3e-73100.00PREDICTED: uncharacterized protein LOC105436033 [Cucumis sativus][more]
gi|659080373|ref|XP_008440757.1|6.3e-6488.89PREDICTED: uncharacterized protein LOC103485075 [Cucumis melo][more]
gi|743791725|ref|XP_011042132.1|7.7e-3051.72PREDICTED: uncharacterized protein LOC105137896 [Populus euphratica][more]
gi|1009144833|ref|XP_015890015.1|8.6e-2952.99PREDICTED: uncharacterized protein LOC107424680 [Ziziphus jujuba][more]
gi|694426120|ref|XP_009340756.1|1.9e-2856.06PREDICTED: uncharacterized protein LOC103932830 [Pyrus x bretschneideri][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006121HMA_dom
Vocabulary: Biological Process
TermDefinition
GO:0030001metal ion transport
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0030001 metal ion transport
biological_process GO:0046916 cellular transition metal ion homeostasis
cellular_component GO:0005575 cellular_component
cellular_component GO:0005737 cytoplasm
molecular_function GO:0003824 catalytic activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0046914 transition metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G504410.1Csa6G504410.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006121Heavy metal-associated domain, HMAPFAMPF00403HMAcoord: 7..62
score: 2.
IPR006121Heavy metal-associated domain, HMAPROFILEPS50846HMA_2coord: 4..71
score: 8
IPR006121Heavy metal-associated domain, HMAunknownSSF55008HMA, heavy metal-associated domaincoord: 3..61
score: 3.0
NoneNo IPR availableGENE3DG3DSA:3.30.70.100coord: 3..61
score: 7.
NoneNo IPR availablePANTHERPTHR22814COPPER TRANSPORT PROTEIN ATOX1-RELATEDcoord: 3..133
score: 9.3
NoneNo IPR availablePANTHERPTHR22814:SF132SUBFAMILY NOT NAMEDcoord: 3..133
score: 9.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa6G504410Cla014234Watermelon (97103) v1cuwmB500
Csa6G504410MELO3C007853Melon (DHL92) v3.5.1cumeB503
Csa6G504410ClCG01G019820Watermelon (Charleston Gray)cuwcgB432
Csa6G504410MELO3C007853.2Melon (DHL92) v3.6.1cumedB483
Csa6G504410Cla97C01G019210Watermelon (97103) v2cuwmbB412
Csa6G504410CSPI06G31240Wild cucumber (PI 183967)cpicuB313
Csa6G504410Cucsa.043060Cucumber (Gy14) v1cgycuB027
Csa6G504410CmaCh03G007280Cucurbita maxima (Rimu)cmacuB681
Csa6G504410CmaCh07G004720Cucurbita maxima (Rimu)cmacuB877
Csa6G504410CmoCh03G007540Cucurbita moschata (Rifu)cmocuB670
Csa6G504410CmoCh07G004700Cucurbita moschata (Rifu)cmocuB865
Csa6G504410Cp4.1LG19g09250Cucurbita pepo (Zucchini)cpecuB503
Csa6G504410Cp4.1LG10g00720Cucurbita pepo (Zucchini)cpecuB085
Csa6G504410CsGy6G030750Cucumber (Gy14) v2cgybcuB281
Csa6G504410Carg00626Silver-seed gourdcarcuB0441
Csa6G504410Carg16059Silver-seed gourdcarcuB0776
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa6G504410Watermelon (97103) v2cuwmbB464
Csa6G504410Watermelon (97103) v2cuwmbB481
Csa6G504410Watermelon (97103) v2cuwmbB503
Csa6G504410Wax gourdcuwgoB556
Csa6G504410Wax gourdcuwgoB644
Csa6G504410Cucumber (Chinese Long) v2cucuB065
Csa6G504410Cucumber (Chinese Long) v2cucuB112
Csa6G504410Cucumber (Chinese Long) v2cucuB146
Csa6G504410Cucumber (Gy14) v1cgycuB484
Csa6G504410Cucurbita maxima (Rimu)cmacuB036
Csa6G504410Cucurbita maxima (Rimu)cmacuB345
Csa6G504410Cucurbita maxima (Rimu)cmacuB484
Csa6G504410Cucurbita moschata (Rifu)cmocuB181
Csa6G504410Cucurbita moschata (Rifu)cmocuB334
Csa6G504410Melon (DHL92) v3.5.1cumeB480
Csa6G504410Melon (DHL92) v3.5.1cumeB485
Csa6G504410Melon (DHL92) v3.5.1cumeB500
Csa6G504410Watermelon (Charleston Gray)cuwcgB473
Csa6G504410Watermelon (Charleston Gray)cuwcgB489
Csa6G504410Watermelon (Charleston Gray)cuwcgB512
Csa6G504410Watermelon (97103) v1cuwmB473
Csa6G504410Watermelon (97103) v1cuwmB483
Csa6G504410Watermelon (97103) v1cuwmB496
Csa6G504410Cucurbita pepo (Zucchini)cpecuB286
Csa6G504410Cucurbita pepo (Zucchini)cpecuB585
Csa6G504410Cucurbita pepo (Zucchini)cpecuB846
Csa6G504410Bottle gourd (USVL1VR-Ls)culsiB434
Csa6G504410Bottle gourd (USVL1VR-Ls)culsiB451
Csa6G504410Bottle gourd (USVL1VR-Ls)culsiB469
Csa6G504410Bottle gourd (USVL1VR-Ls)culsiB484
Csa6G504410Cucumber (Gy14) v2cgybcuB077
Csa6G504410Cucumber (Gy14) v2cgybcuB140
Csa6G504410Cucumber (Gy14) v2cgybcuB187
Csa6G504410Melon (DHL92) v3.6.1cumedB459
Csa6G504410Melon (DHL92) v3.6.1cumedB465
Csa6G504410Melon (DHL92) v3.6.1cumedB480
Csa6G504410Silver-seed gourdcarcuB0962
Csa6G504410Silver-seed gourdcarcuB0996
Csa6G504410Silver-seed gourdcarcuB1034