Csa6G501360 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGACATGTTTGATGGTGTTTGGAAAGAAATATAAAGACCAAGAGTTTGACGAGAGGGGTTTCAAATCTGTGATACAAGAGGCCATGCAGATAGTGGCTAGTCCTAACTTGGGAGATTTTATTCCTCAAATTGCAGTACTTGATCTTCAAGGGTTGGACCGTCGCTCAAAAGCTGTTAGTAAGATATTTGATGAGTTCTTTGAGAGAATTATTGATGAACATCTTGAATCCAGGTATGAGAATAAGACTAAGGATTTTGTGGATGTCATGTTGGAAATCATGGACTCTCAAGGAACCGAGTATCAGATTGAACGGTCTAACATCAAAGCTATAATCCTTGTAAGTAAACTTCCTACGTATTAAATAAAGGAGTCGAGAAGGATATGGCTTACTGTGGTCATGATACAATAGCATGCTTTTTTTTTTTTTTTGAAAAAATATAATATATCTCTGAATACTGTCACCAAAAAGTATGCATAAAGCTAATTGCTCCTAAATTTTAGTAACTCATCGGCTTAAGTAAAAGAAATTTCAGTTATTGGTTCTAATTAGCTTGAC ATGACATGTTTGATGGTGTTTGGAAAGAAATATAAAGACCAAGAGTTTGACGAGAGGGGTTTCAAATCTGTGATACAAGAGGCCATGCAGATAGTGGCTAGTCCTAACTTGGGAGATTTTATTCCTCAAATTGCAGTACTTGATCTTCAAGGGTTGGACCGTCGCTCAAAAGCTGTTAGTAAGATATTTGATGAGTTCTTTGAGAGAATTATTGATGAACATCTTGAATCCAGGTATGAGAATAAGACTAAGGATTTTGTGGATGTCATGTTGGAAATCATGGACTCTCAAGGAACCGAGTATCAGATTGAACGGTCTAACATCAAAGCTATAATCCTTGTAAGTAAACTTCCTACGTATTAA ATGACATGTTTGATGGTGTTTGGAAAGAAATATAAAGACCAAGAGTTTGACGAGAGGGGTTTCAAATCTGTGATACAAGAGGCCATGCAGATAGTGGCTAGTCCTAACTTGGGAGATTTTATTCCTCAAATTGCAGTACTTGATCTTCAAGGGTTGGACCGTCGCTCAAAAGCTGTTAGTAAGATATTTGATGAGTTCTTTGAGAGAATTATTGATGAACATCTTGAATCCAGGTATGAGAATAAGACTAAGGATTTTGTGGATGTCATGTTGGAAATCATGGACTCTCAAGGAACCGAGTATCAGATTGAACGGTCTAACATCAAAGCTATAATCCTTGTAAGTAAACTTCCTACGTATTAA MTCLMVFGKKYKDQEFDERGFKSVIQEAMQIVASPNLGDFIPQIAVLDLQGLDRRSKAVSKIFDEFFERIIDEHLESRYENKTKDFVDVMLEIMDSQGTEYQIERSNIKAIILVSKLPTY*
BLAST of Csa6G501360 vs. Swiss-Prot
Match: C75A1_PETHY (Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida GN=CYP75A1 PE=2 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 1.2e-13 Identity = 42/111 (37.84%), Postives = 67/111 (60.36%), Query Frame = 1
BLAST of Csa6G501360 vs. Swiss-Prot
Match: C71A8_MENPI (Cytochrome P450 71A8 OS=Mentha piperita GN=CYP71A8 PE=3 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 3.5e-13 Identity = 37/114 (32.46%), Postives = 66/114 (57.89%), Query Frame = 1
BLAST of Csa6G501360 vs. Swiss-Prot
Match: C75A1_PINTA (Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 PE=2 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 1.7e-12 Identity = 43/113 (38.05%), Postives = 60/113 (53.10%), Query Frame = 1
BLAST of Csa6G501360 vs. Swiss-Prot
Match: C71A2_SOLME (Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71A2 PE=2 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 5.0e-12 Identity = 40/118 (33.90%), Postives = 69/118 (58.47%), Query Frame = 1
BLAST of Csa6G501360 vs. Swiss-Prot
Match: C71A4_SOLME (Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71A4 PE=2 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 1.5e-11 Identity = 37/120 (30.83%), Postives = 72/120 (60.00%), Query Frame = 1
BLAST of Csa6G501360 vs. TrEMBL
Match: A0A0A0KM23_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G501360 PE=4 SV=1) HSP 1 Score: 237.7 bits (605), Expect = 7.6e-60 Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 1
BLAST of Csa6G501360 vs. TrEMBL
Match: M5WSS3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022041mg PE=3 SV=1) HSP 1 Score: 165.2 bits (417), Expect = 4.8e-38 Identity = 80/113 (70.80%), Postives = 95/113 (84.07%), Query Frame = 1
BLAST of Csa6G501360 vs. TrEMBL
Match: B9T1C6_RICCO (Flavonoid 3-hydroxylase, putative OS=Ricinus communis GN=RCOM_0193830 PE=3 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 1.8e-37 Identity = 80/113 (70.80%), Postives = 95/113 (84.07%), Query Frame = 1
BLAST of Csa6G501360 vs. TrEMBL
Match: V4SVX2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10027549mg PE=3 SV=1) HSP 1 Score: 162.9 bits (411), Expect = 2.4e-37 Identity = 78/113 (69.03%), Postives = 95/113 (84.07%), Query Frame = 1
BLAST of Csa6G501360 vs. TrEMBL
Match: A0A0A0KGC7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G501310 PE=4 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 7.0e-37 Identity = 78/115 (67.83%), Postives = 99/115 (86.09%), Query Frame = 1
BLAST of Csa6G501360 vs. TAIR10
Match: AT5G24960.1 (AT5G24960.1 cytochrome P450, family 71, subfamily A, polypeptide 14) HSP 1 Score: 68.6 bits (166), Expect = 3.1e-12 Identity = 39/114 (34.21%), Postives = 68/114 (59.65%), Query Frame = 1
BLAST of Csa6G501360 vs. TAIR10
Match: AT5G44620.1 (AT5G44620.1 cytochrome P450, family 706, subfamily A, polypeptide 3) HSP 1 Score: 68.6 bits (166), Expect = 3.1e-12 Identity = 34/114 (29.82%), Postives = 67/114 (58.77%), Query Frame = 1
BLAST of Csa6G501360 vs. TAIR10
Match: AT2G30770.1 (AT2G30770.1 cytochrome P450, family 71, subfamily A, polypeptide 13) HSP 1 Score: 68.2 bits (165), Expect = 4.1e-12 Identity = 33/114 (28.95%), Postives = 69/114 (60.53%), Query Frame = 1
BLAST of Csa6G501360 vs. TAIR10
Match: AT5G24950.1 (AT5G24950.1 cytochrome P450, family 71, subfamily A, polypeptide 15) HSP 1 Score: 66.6 bits (161), Expect = 1.2e-11 Identity = 37/108 (34.26%), Postives = 65/108 (60.19%), Query Frame = 1
BLAST of Csa6G501360 vs. TAIR10
Match: AT4G13310.1 (AT4G13310.1 cytochrome P450, family 71, subfamily A, polypeptide 20) HSP 1 Score: 66.6 bits (161), Expect = 1.2e-11 Identity = 34/111 (30.63%), Postives = 66/111 (59.46%), Query Frame = 1
BLAST of Csa6G501360 vs. NCBI nr
Match: gi|700193592|gb|KGN48796.1| (hypothetical protein Csa_6G501360 [Cucumis sativus]) HSP 1 Score: 237.7 bits (605), Expect = 1.1e-59 Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 1
BLAST of Csa6G501360 vs. NCBI nr
Match: gi|778722447|ref|XP_011658487.1| (PREDICTED: cytochrome P450 CYP736A12-like [Cucumis sativus]) HSP 1 Score: 223.8 bits (569), Expect = 1.6e-55 Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 1
BLAST of Csa6G501360 vs. NCBI nr
Match: gi|659080218|ref|XP_008440675.1| (PREDICTED: cytochrome P450 CYP736A12-like [Cucumis melo]) HSP 1 Score: 199.9 bits (507), Expect = 2.5e-48 Identity = 101/113 (89.38%), Postives = 106/113 (93.81%), Query Frame = 1
BLAST of Csa6G501360 vs. NCBI nr
Match: gi|645306550|ref|XP_008246192.1| (PREDICTED: cytochrome P450 CYP736A12-like, partial [Prunus mume]) HSP 1 Score: 167.9 bits (424), Expect = 1.1e-38 Identity = 81/114 (71.05%), Postives = 97/114 (85.09%), Query Frame = 1
BLAST of Csa6G501360 vs. NCBI nr
Match: gi|645219204|ref|XP_008234579.1| (PREDICTED: cytochrome P450 CYP736A12-like [Prunus mume]) HSP 1 Score: 166.4 bits (420), Expect = 3.1e-38 Identity = 80/113 (70.80%), Postives = 96/113 (84.96%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|