Csa6G500490 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCAATAAAATAAAATAAACCCTATGGAGCAGACGGCATCAGCAGGACCCTCAATCCTCTACTTCCCATGATCTGCGATTCACTGACCCTCACCGCCACCATTCTCCTTCTCCGTTCGGTAGTTCGCCGCCGCTATCTACGGTTTTCCTCCCTCTTTTAATTTCTCCTTGTGTTATTTTTTTCTACAAGTATCCAATTTTTTAAAGTTAATTTTTGCTCTTTTCTTTTTTACACAATTTTATTTTATTTATTTTATTTATATTTTTTCCCTAACCAGGTTAATTTAGTTTAGTATATCATTTCGGATAACTTCACCAAACTTAATTCTTGTCCTCCGAGCCCCCAATTCTCCGCTCTAGGGCTTCTGATCTGACCAACACCACTATGGCTATGCATACTGGAGTAGGGCTTTCAAAGATCCTGATTCTTGTGGGAGCTGGTATTTTCTTCTATTTCTGATCCATCTTTCAGTTTATATGATCCAAGAACGGTTTTTTCCAGACTCTGTCACGTTTCTTAATATTGCTATCCTGCTTATTTTTACAGGCTACTCCACTACGATCATGCTTAAGAACGGTAAACTATCTGATGTATTGGGTGAACTTCAGGTATCGATTTCTTTTATTTTGGATTTCTCCCCCCCCACCCCACATCTATTCTGCTAATTAGCTCCTATGTTGGGATTTTTTTGAGGAAAATTCTAAGTCGCTATTCAGTACTCATTTTTCGTGTAATTATCGACTAGGGTGTTTTCAAGTTCTTGCCGTCATCGTTTGTTTACGGTGGACTTTAATATCTCGCTTCCTAGGAAATTGCTTATTGGATGTCTCATAAATTTGTCTCAATCTTGTTTAAAGATAGAATCTCCTGGCTCAGCTAAGCGTTGCGAACATATGTTCAATTTTGATATGAGTGACTTCATTTTATATTGTTATGCTTACAGTCCTTGGTGAAGGGCATGGAGAAGTCTGGGGAGCAATCCGATGGTGATTCTGACTACTCTGATGCTATTGCTGCTCAGGTGCTGAATGATTATATGTATTTTAAAGAGGTATTGTCCGGTAGTCACTTATGTGGCTAATGAAATTCCCAATTGACTATTGTGCAGGTGCGTCGACTGGCTATGGAGGTTCGACAACTCTCCTCGTCACGCCAGATCACTATTCTCAATGGAAACTCTGGGAATATTGGCAAGTACCAACATATTTTCATTTAGTTAATTGGAAAATTGCATAATTGATGATCTTTGACGATGTCCCCATAATGGATTTTGATTTTGCTTAATGCAATAGTTCTACATGTCAGTGGTGACTCTTCGATTATTTATTTGCAAACAGGTAATTTATCATCTCTCATAGTTCCAGCTGCTACTTTGGGTGCTTTGGGATATGGATACATGTGGTGGAAGGTAAACTTAGGTCTGTTTCGTACAGAATTTGAAGATAAAGGATTCAAAGAAAACAGAGTTGTATTTTATGTTTTCAGATGCGTTTGGTGGCAAGTTCCAAAATTGAATTCTAGTTTTAGAAAAAAATTTAAATGTGTTTCATACTACATAATTATAAATCAGATATGTGTTCCATAATGTTGACAATTAGTTATTATTAATTTATTTATGAATATAATTTATGTTCACAAAATGAGTTAGATTGCAATTTTAGTCCACATTGTTTGGAGAAAGTTAGAGTTTAACCTATAGTTTGATAAACAATCCTTATGGTTTGACAACCTTCATAAATAGTCCTTACGAGCTAGGCTATTCTCTATGATTTTATCAAACCAAATAAACTAAATTCTAGTTATAAACCATAGTTCTATCCATTTAAAACCATTGAGACCAAATTTGTAATTTAACCTAAAAAGTTTCTATAATTGTTATTTTGTATTATTATTTAGATGATGATCTAATATTACATCACACACCCAAAATTTAATGTCATTTTGTTTTGCTGTCTTTCTATAATTTAGTTTCACATTGGTTGGTTCGTCTTTGTTTTTTTTCAGAACTCATATCCTTTTTGTTCTTTCTGTTTGAGTAGGGACTTTCCTTCTCAGACCTTATGTATGTTACAAAGCGCAATATGGCTAATGCTGTCTCAAACTTAACCAAACATTTGGAGCACGTATCGGAGGCCCTTGCTGTAAGTGTGGTCTAGTATTCCCTTTAACCTGTTTTATTAAGAGGGAAAGAAGTGTTTGTATGGCTCATGTCATTGTGTTAATATTATTATAATTAATGAGTTTTGAGAACCTGGCATACACATTTCTGCATAATACTTAATCCGTGTTTCAGACATTACTGATATTTATTAGTTCATTTATCTTTCCTGTTATGTATTTTGTGGAATCAAACATCATAAAACATTCAAGTCATTCACCCCACCCCTCAAGCTGTGTATCTATAGTTTCAATTTTTTTTTTCGTATTTTTTATTTGAATTCTTTTAGAAAATTATTGTTATTTTTTTTTTCATAATGATTCATTGGTGTTGGAAATTGTGACATTGGCATAAAGGATATAAGGAATATGTTGACAATTTTGTACTTATTTCTTTTGTTGATAGGCAACAAAGAGGCATTTGACACAACGGATTGAGAACTTGGATGATAAGATGGTTAAGCAGAATGAACTCTCGAAATTGATTAAAGAAGATGTATGTGATCTAAAGTTTTTAAGTTCTGTGACAATTGAGTTTTATGTCATCTGCAAGTTTTAGTAAACCAACATTTTTGTCTATGGTATACGCATGTGTTAGTGTTCAAAAGTTAAATGTTGAATGAACTATGGACTTTATGGTGGTCTAAAGTTATTTTGATAGAAATAAATTTTATACTGCTGGTAATCACCTTTAGCACCACATTTTGCTATTTAGTTTTTAAAATCCCTTCCTTTTCGTGTCGCGGTACACTTCTTTTCTCATAGTGTCATTTTGCTATATATATGATTGCATGGACCTGATGCTTTGAGGTATCAGAATGTTATGTAGTTTAGAAGTACCTATTCTCGGAAGAAATATTGATAACTTCCATGTAATATGATCTCAAATAAAACAAAGCTAAACTGCGTAAGCTAACTCTGTATAGATGTAGTGAGTTTAAAATCCTGTTCATATAAAGTGGTAGATGGTACATTCTGTCAAATATTTGATTACATTTACATTATTTTCATATGGTTATGATTGGTGGAACAGGTGGCAGGAGTTCAAAAATCTCTTTCCGACATCGACTTTGACTTGGGCGAGTTGCACAACATGGTTTCTGGTTTGGTGAGTTTTCCATCAGACTGGTGATGTTATCAATTTATTGCATTTACCATGTCATCAATTTTTCCATTGTACTTTCACGGGCATGCCAAATCATTTTTTTCTATAACTGCTTCTGACTTTCAATGAGTGATGAGTAATTCTTTAGACCTTGTGTTTACTGAGAAGAATATGACATTAAAAGATATTACATATTAGGTACTACTGTTACTTGAGGATTAATAAGTATATTACATCTCTTGACTTGTTTCAGGATGGGAAACTATCTCAACTTGAATTTAAACAGGTGAGAAACTTCCTCTTTTAGATTTTGGTATTTTTAAGTATTATATTATTACTGAATTGGCAGGCAGATCTGCGGGGGAGCATTCCCCCCCCCCCCAATCATGATTTTTCAATTCTCAAACATATTACAAATTAAAATTGTTTTTTTTATTGGGAAAATTGTATCTGATTGAGCCTCAGAATTTCAATTGCTTACAATAATTGATAGGTACATTGTAAAAAATTTAGGCTCCTATTATGCACATTTTGAAGTTCAGAGACCATCTAGAATCAAATTCAGAAGTCCATGGGATAAGTTACTGATCTTTTTTATGAAATTGTGTCCCCTGAAATGAAATCCTGGATCCGCTATTACTGGTCTTCCTTTATACTTTAAAAGGGGAGGTCTCCAATCAAATATAATAAATCGGGTTAATTAGTGGGTATGTATTCAGAATAGGGAGGCTTACCATAGTTCTTATTTCCTGACATGGTTTTCTTTTTTATTTTTGCAGAACCATTTCTGCTCTTATGATATTGGAAACATTGCTTATAATAATTTTTTTATCAGGATTTTGCAACTCTTGGTGTAATGTACTTGTGCAATGTTGTCGATGGAAAGCAAGTAAAGATGCCTGACACTTTAAAGGTTGATCCAGTATTTCTTTTATTTTTCACATATTTATCATGCATGTATGTCGGTCAATTTAACTACTTGCTCAATTATTTCCATTACTTATTATTTCAATCTTGGAACTCATGTTACATGTTATCTCTGACTCTTCACTCCATGCTTCCCAGTGAAACTAATTTTTGTATCCTTTATCATACCCGACTTGCAGGAGCAGTTCAAACTTTCAGGCAAGGCTCAGGGTCAGCTGATGCATCTGGAATCTCCCAATCTTAAGGTATGTGATATAAAGCATACCCTGATTAGTTGACGGGAATGCAAAATGGTTGTGGATGTGATATAGAAGTGGTTCTTATGTGGGGGGATGTTTGGAGGGTATTAACACGTATATGAGTGATTTATTGTCTTAAATATCATTTACTATTTGTTACTTGTTTGTAAGTGTGCCGATTGCATTCCTTCAGGGTCTTAAAGAACTCACTGATACACTGTCACAAGATATTACATGCGAGCAACCAAGAGCCCTGCTCAGGTTTGTTGATTTTTTAGCATCTTGATCCTTCCTCTACATGCAGTAGAAGTGATTGATGTTCCACTAATGTTTAACAATGTTGTTTAATTAGGGTTTTCTCATTACTTTGAAAAATTGGAATTTAAAACAATAAACACTACATATCTTGTCTTGTCCAACTAAGACCAACCCCACTAGAAAATCTTGCTAGTTTGGATGTGTGAAGAATAATTACCTTGCCCATGTTAAATTGCCTTGGGTTCTACTTTCCTTCGGGGAAAAGTTGATAATAGAATAAAAGAAAAATAGTTGAATGGTTAGATTATCTGGACCGGATTGCCTAGAAATGTATCTCATTTGTGTTTCGCATCTTTAGATGATGGTCTCTGTGTGACTGTGTCTTATTAAAAAGAGGGGAAAAAAATTCGGCCCCTGGTTGAGAATATATTAAGATGATTAATATGACTAGTAGTAAGGGGCATTCTAATAATTAGACATTAAGTTTGTTAAGTCTTTTGGGTTATAAATAGGAGAGTATGGCTAGTGTGAGGAGAATTTTGGGTGAGCATAGGCTCATTGTTTTTTATTTTCCTTCCTGAGTTATGGGATATTTTTCTTCTTGTTGGGATCATCTGTTTACGGGAAGAATAATCCTATTATCCTAACACTGTTTTCTTTTATGCTTTACATTCTCATTGAAAGATTTCTTGCTTTGTTGTGACCGTTTATATGGGGTTGTTTTGAGAAATGGCAGGTCCACCTCGACTAGATGTTAATCAGAAGAGAGATTGTTTATTGTGCACCCTCCCGTGTTAATTCTACCATCATCTACATAATTTAAGTTAAAATCTTTACATGTATCCTATCCCAAGGAGGCGTTCTTTGGGCATTTCCTTGTATGGATTTTCTTTTTCTTTTCCCCCCTAAAATCTATGAATAGTTTATGTTGGCAATGAGTATATTTTGATATGCGATGTTAGGACATTTTGGGGTGTGATTACTCCTTCACACAAATAAACTTTTGTATTGAGAACTTTCAGTTTATCTCCAGATTCTACAAAAACATTATACGTAAGGGTCATGGAACAAAATTTTGCCCCGTAGTTTGTTACGACTTTTGTTTCTAGTTTGTTTCTTTTACACCA ATGGCTATGCATACTGGAGTAGGGCTTTCAAAGATCCTGATTCTTGTGGGAGCTGGCTACTCCACTACGATCATGCTTAAGAACGGTAAACTATCTGATGTATTGGGTGAACTTCAGTCCTTGGTGAAGGGCATGGAGAAGTCTGGGGAGCAATCCGATGGTGATTCTGACTACTCTGATGCTATTGCTGCTCAGGTGCGTCGACTGGCTATGGAGGTTCGACAACTCTCCTCGTCACGCCAGATCACTATTCTCAATGGAAACTCTGGGAATATTGGTAATTTATCATCTCTCATAGTTCCAGCTGCTACTTTGGGTGCTTTGGGATATGGATACATGTGGTGGAAGGGACTTTCCTTCTCAGACCTTATGTATGTTACAAAGCGCAATATGGCTAATGCTGTCTCAAACTTAACCAAACATTTGGAGCACGTATCGGAGGCCCTTGCTGCAACAAAGAGGCATTTGACACAACGGATTGAGAACTTGGATGATAAGATGGTTAAGCAGAATGAACTCTCGAAATTGATTAAAGAAGATGTGGCAGGAGTTCAAAAATCTCTTTCCGACATCGACTTTGACTTGGGCGAGTTGCACAACATGGTTTCTGGTTTGGATGGGAAACTATCTCAACTTGAATTTAAACAGGATTTTGCAACTCTTGGTGTAATGTACTTGTGCAATGTTGTCGATGGAAAGCAAGTAAAGATGCCTGACACTTTAAAGGAGCAGTTCAAACTTTCAGGCAAGGCTCAGGGTCAGCTGATGCATCTGGAATCTCCCAATCTTAAGGGTCTTAAAGAACTCACTGATACACTGTCACAAGATATTACATGCGAGCAACCAAGAGCCCTGCTCAGGTCCACCTCGACTAGATGTTAA ATGGCTATGCATACTGGAGTAGGGCTTTCAAAGATCCTGATTCTTGTGGGAGCTGGCTACTCCACTACGATCATGCTTAAGAACGGTAAACTATCTGATGTATTGGGTGAACTTCAGTCCTTGGTGAAGGGCATGGAGAAGTCTGGGGAGCAATCCGATGGTGATTCTGACTACTCTGATGCTATTGCTGCTCAGGTGCGTCGACTGGCTATGGAGGTTCGACAACTCTCCTCGTCACGCCAGATCACTATTCTCAATGGAAACTCTGGGAATATTGGTAATTTATCATCTCTCATAGTTCCAGCTGCTACTTTGGGTGCTTTGGGATATGGATACATGTGGTGGAAGGGACTTTCCTTCTCAGACCTTATGTATGTTACAAAGCGCAATATGGCTAATGCTGTCTCAAACTTAACCAAACATTTGGAGCACGTATCGGAGGCCCTTGCTGCAACAAAGAGGCATTTGACACAACGGATTGAGAACTTGGATGATAAGATGGTTAAGCAGAATGAACTCTCGAAATTGATTAAAGAAGATGTGGCAGGAGTTCAAAAATCTCTTTCCGACATCGACTTTGACTTGGGCGAGTTGCACAACATGGTTTCTGGTTTGGATGGGAAACTATCTCAACTTGAATTTAAACAGGATTTTGCAACTCTTGGTGTAATGTACTTGTGCAATGTTGTCGATGGAAAGCAAGTAAAGATGCCTGACACTTTAAAGGAGCAGTTCAAACTTTCAGGCAAGGCTCAGGGTCAGCTGATGCATCTGGAATCTCCCAATCTTAAGGGTCTTAAAGAACTCACTGATACACTGTCACAAGATATTACATGCGAGCAACCAAGAGCCCTGCTCAGGTCCACCTCGACTAGATGTTAA MAMHTGVGLSKILILVGAGYSTTIMLKNGKLSDVLGELQSLVKGMEKSGEQSDGDSDYSDAIAAQVRRLAMEVRQLSSSRQITILNGNSGNIGNLSSLIVPAATLGALGYGYMWWKGLSFSDLMYVTKRNMANAVSNLTKHLEHVSEALAATKRHLTQRIENLDDKMVKQNELSKLIKEDVAGVQKSLSDIDFDLGELHNMVSGLDGKLSQLEFKQDFATLGVMYLCNVVDGKQVKMPDTLKEQFKLSGKAQGQLMHLESPNLKGLKELTDTLSQDITCEQPRALLRSTSTRC*
BLAST of Csa6G500490 vs. TrEMBL
Match: A0A0A0KK42_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G500490 PE=4 SV=1) HSP 1 Score: 570.9 bits (1470), Expect = 9.3e-160 Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 1
BLAST of Csa6G500490 vs. TrEMBL
Match: D7TND9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0026g01700 PE=4 SV=1) HSP 1 Score: 387.5 bits (994), Expect = 1.5e-104 Identity = 195/307 (63.52%), Postives = 242/307 (78.83%), Query Frame = 1
BLAST of Csa6G500490 vs. TrEMBL
Match: A0A059D7U8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03413 PE=4 SV=1) HSP 1 Score: 377.5 bits (968), Expect = 1.5e-101 Identity = 194/308 (62.99%), Postives = 240/308 (77.92%), Query Frame = 1
BLAST of Csa6G500490 vs. TrEMBL
Match: A0A059D8J3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03413 PE=4 SV=1) HSP 1 Score: 375.9 bits (964), Expect = 4.4e-101 Identity = 186/277 (67.15%), Postives = 228/277 (82.31%), Query Frame = 1
BLAST of Csa6G500490 vs. TrEMBL
Match: A0A022RT62_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a011065mg PE=4 SV=1) HSP 1 Score: 369.0 bits (946), Expect = 5.3e-99 Identity = 194/295 (65.76%), Postives = 234/295 (79.32%), Query Frame = 1
BLAST of Csa6G500490 vs. TAIR10
Match: AT1G27000.1 (AT1G27000.1 Protein of unknown function (DUF1664)) HSP 1 Score: 325.1 bits (832), Expect = 4.5e-89 Identity = 174/306 (56.86%), Postives = 219/306 (71.57%), Query Frame = 1
BLAST of Csa6G500490 vs. TAIR10
Match: AT2G02730.1 (AT2G02730.1 Protein of unknown function (DUF1664)) HSP 1 Score: 282.0 bits (720), Expect = 4.3e-76 Identity = 147/271 (54.24%), Postives = 203/271 (74.91%), Query Frame = 1
BLAST of Csa6G500490 vs. TAIR10
Match: AT1G04960.2 (AT1G04960.2 Protein of unknown function (DUF1664)) HSP 1 Score: 200.3 bits (508), Expect = 1.7e-51 Identity = 106/256 (41.41%), Postives = 168/256 (65.62%), Query Frame = 1
BLAST of Csa6G500490 vs. TAIR10
Match: AT1G24267.2 (AT1G24267.2 Protein of unknown function (DUF1664)) HSP 1 Score: 103.2 bits (256), Expect = 2.8e-22 Identity = 64/222 (28.83%), Postives = 115/222 (51.80%), Query Frame = 1
BLAST of Csa6G500490 vs. TAIR10
Match: AT1G24265.3 (AT1G24265.3 Protein of unknown function (DUF1664)) HSP 1 Score: 97.4 bits (241), Expect = 1.5e-20 Identity = 58/213 (27.23%), Postives = 105/213 (49.30%), Query Frame = 1
BLAST of Csa6G500490 vs. NCBI nr
Match: gi|449451443|ref|XP_004143471.1| (PREDICTED: uncharacterized protein LOC101210112 [Cucumis sativus]) HSP 1 Score: 570.9 bits (1470), Expect = 1.3e-159 Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 1
BLAST of Csa6G500490 vs. NCBI nr
Match: gi|659080089|ref|XP_008440604.1| (PREDICTED: uncharacterized protein LOC103484978 [Cucumis melo]) HSP 1 Score: 553.5 bits (1425), Expect = 2.2e-154 Identity = 283/293 (96.59%), Postives = 291/293 (99.32%), Query Frame = 1
BLAST of Csa6G500490 vs. NCBI nr
Match: gi|359473271|ref|XP_002277155.2| (PREDICTED: uncharacterized protein LOC100246806 [Vitis vinifera]) HSP 1 Score: 387.5 bits (994), Expect = 2.1e-104 Identity = 195/307 (63.52%), Postives = 242/307 (78.83%), Query Frame = 1
BLAST of Csa6G500490 vs. NCBI nr
Match: gi|747048628|ref|XP_011070330.1| (PREDICTED: uncharacterized protein LOC105156013 [Sesamum indicum]) HSP 1 Score: 383.3 bits (983), Expect = 3.9e-103 Identity = 201/296 (67.91%), Postives = 243/296 (82.09%), Query Frame = 1
BLAST of Csa6G500490 vs. NCBI nr
Match: gi|1009153989|ref|XP_015894926.1| (PREDICTED: uncharacterized protein LOC107428849 [Ziziphus jujuba]) HSP 1 Score: 381.3 bits (978), Expect = 1.5e-102 Identity = 204/308 (66.23%), Postives = 246/308 (79.87%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |