Csa6G496400 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G496400
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 24188456 .. 24188899 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGAAGAGATAATAACCCAGATAAAAATGAGTAGTGTAGGGAGGGGTACGGAGGGTAATAGTAGGTTGAGGATTGAGGTTTCAGAGGGGGGAGGGTGGATTATGAAGGATGGTTTTATTGTGAGAAAGGGGTTTGATGGATGAGGGAAGAATGGGCGGGCGTGGTAGCAGTCAGAGGGGGAGAGAAGGAAGAAGAAGATGAAGAAGATGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAGGGGGGAGAAAATTGGAAAAAGCGGAGATTGGGAATGGTGGGGGGGTGAAAATGAAATAGGGGAGAGTATTTTAGACAAAGAAAAAGAGAGGGGTGGGGTCTGCGCCTTGGGGGATTCGGCTATGGTTGTGGGGGCGGCGACTGCGCATGTGAAGCCGAGGATAGCGACCACTCCAAAGGGTATTTTCGTCACTTATTAA

mRNA sequence

ATGGAGGAAGAGATAATAACCCAGATAAAAATGAGTAGTGTAGGGAGGGGTACGGAGGGTAATAGTAGGTTGAGGATTGAGTCAGAGGGGGAGAGAAGGAAGAAGAAGATGAAGAAGATGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAGGGGGGAGAAAATTGGAAAAAGCGGAGATTGGGAATGGTGGGGGGGTGAAAATGAAATAGGGGAGAGTATTTTAGACAAAGAAAAAGAGAGGGGTGGGGTCTGCGCCTTGGGGGATTCGGCTATGGTTGTGGGGGCGGCGACTGCGCATGTGAAGCCGAGGATAGCGACCACTCCAAAGGGTATTTTCGTCACTTATTAA

Coding sequence (CDS)

ATGGAGGAAGAGATAATAACCCAGATAAAAATGAGTAGTGTAGGGAGGGGTACGGAGGGTAATAGTAGGTTGAGGATTGAGTCAGAGGGGGAGAGAAGGAAGAAGAAGATGAAGAAGATGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAGGGGGGAGAAAATTGGAAAAAGCGGAGATTGGGAATGGTGGGGGGGTGAAAATGAAATAGGGGAGAGTATTTTAGACAAAGAAAAAGAGAGGGGTGGGGTCTGCGCCTTGGGGGATTCGGCTATGGTTGTGGGGGCGGCGACTGCGCATGTGAAGCCGAGGATAGCGACCACTCCAAAGGGTATTTTCGTCACTTATTAA

Protein sequence

MEEEIITQIKMSSVGRGTEGNSRLRIESEGERRKKKMKKMKKKKKKRRRRRGEKIGKSGDWEWWGGENEIGESILDKEKERGGVCALGDSAMVVGAATAHVKPRIATTPKGIFVTY*
Homology
[Close]
BLAST of Csa6G496400 vs. TrEMBL
Match: A0A0A0KJR9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G496400 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 2.1e-59
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 1 

Query: 1   MEEEIITQIKMSSVGRGTEGNSRLRIESEGERRKKKMKKMKKKKKKRRRRRGEKIGKSGD 60
           MEEEIITQIKMSSVGRGTEGNSRLRIESEGERRKKKMKKMKKKKKKRRRRRGEKIGKSGD
Sbjct: 1   MEEEIITQIKMSSVGRGTEGNSRLRIESEGERRKKKMKKMKKKKKKRRRRRGEKIGKSGD 60

Query: 61  WEWWGGENEIGESILDKEKERGGVCALGDSAMVVGAATAHVKPRIATTPKGIFVTY 117
           WEWWGGENEIGESILDKEKERGGVCALGDSAMVVGAATAHVKPRIATTPKGIFVTY
Sbjct: 61  WEWWGGENEIGESILDKEKERGGVCALGDSAMVVGAATAHVKPRIATTPKGIFVTY 116

[Close]
BLAST of Csa6G496400 vs. NCBI nr
Match: gi|700193433|gb|KGN48637.1| (hypothetical protein Csa_6G496400 [Cucumis sativus])

HSP 1 Score: 236.1 bits (601), Expect = 3.1e-59
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 1 

Query: 1   MEEEIITQIKMSSVGRGTEGNSRLRIESEGERRKKKMKKMKKKKKKRRRRRGEKIGKSGD 60
           MEEEIITQIKMSSVGRGTEGNSRLRIESEGERRKKKMKKMKKKKKKRRRRRGEKIGKSGD
Sbjct: 1   MEEEIITQIKMSSVGRGTEGNSRLRIESEGERRKKKMKKMKKKKKKRRRRRGEKIGKSGD 60

Query: 61  WEWWGGENEIGESILDKEKERGGVCALGDSAMVVGAATAHVKPRIATTPKGIFVTY 117
           WEWWGGENEIGESILDKEKERGGVCALGDSAMVVGAATAHVKPRIATTPKGIFVTY
Sbjct: 61  WEWWGGENEIGESILDKEKERGGVCALGDSAMVVGAATAHVKPRIATTPKGIFVTY 116

The following BLAST results are available for this feature:
BLAST of Csa6G496400 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KJR9_CUCSA2.1e-59100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G496400 PE=4 SV=1[more]
BLAST of Csa6G496400 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700193433|gb|KGN48637.1|3.1e-59100.00hypothetical protein Csa_6G496400 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G496400.1Csa6G496400.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa6G496400Cucurbita pepo (Zucchini)cpecuB085
Csa6G496400Cucurbita pepo (Zucchini)cpecuB468
Csa6G496400Cucurbita pepo (Zucchini)cpecuB503
Csa6G496400Bottle gourd (USVL1VR-Ls)culsiB434
Csa6G496400Bottle gourd (USVL1VR-Ls)culsiB456
Csa6G496400Bottle gourd (USVL1VR-Ls)culsiB474
Csa6G496400Cucumber (Gy14) v2cgybcuB082
Csa6G496400Cucumber (Gy14) v2cgybcuB185
Csa6G496400Cucumber (Gy14) v2cgybcuB281
Csa6G496400Melon (DHL92) v3.6.1cumedB452
Csa6G496400Melon (DHL92) v3.6.1cumedB482
Csa6G496400Melon (DHL92) v3.6.1cumedB483
Csa6G496400Silver-seed gourdcarcuB0003
Csa6G496400Silver-seed gourdcarcuB0206
Csa6G496400Silver-seed gourdcarcuB0409
Csa6G496400Silver-seed gourdcarcuB0441
Csa6G496400Watermelon (97103) v2cuwmbB412
Csa6G496400Watermelon (97103) v2cuwmbB494
Csa6G496400Wax gourdcuwgoB577
Csa6G496400Wax gourdcuwgoB621
Csa6G496400Wax gourdcuwgoB648
Csa6G496400Cucumber (Chinese Long) v2cucuB072
Csa6G496400Cucumber (Chinese Long) v2cucuB143
Csa6G496400Cucumber (Gy14) v1cgycuB121
Csa6G496400Cucumber (Gy14) v1cgycuB496
Csa6G496400Cucumber (Gy14) v1cgycuB552
Csa6G496400Cucurbita maxima (Rimu)cmacuB194
Csa6G496400Cucurbita maxima (Rimu)cmacuB681
Csa6G496400Cucurbita maxima (Rimu)cmacuB775
Csa6G496400Cucurbita maxima (Rimu)cmacuB877
Csa6G496400Cucurbita moschata (Rifu)cmocuB024
Csa6G496400Cucurbita moschata (Rifu)cmocuB176
Csa6G496400Cucurbita moschata (Rifu)cmocuB477
Csa6G496400Cucurbita moschata (Rifu)cmocuB670
Csa6G496400Cucurbita moschata (Rifu)cmocuB766
Csa6G496400Cucurbita moschata (Rifu)cmocuB865
Csa6G496400Melon (DHL92) v3.5.1cumeB470
Csa6G496400Melon (DHL92) v3.5.1cumeB503
Csa6G496400Watermelon (Charleston Gray)cuwcgB432
Csa6G496400Watermelon (Charleston Gray)cuwcgB503
Csa6G496400Watermelon (97103) v1cuwmB461
Csa6G496400Watermelon (97103) v1cuwmB500