Csa6G495660 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCTCACTCCCGCCACGGGAAAGGCCAATGGAACCCCATTCTCCTTCCTTCGGCCTTTTCCCTGTCGCTTCACTTTCTTCTCCCACTCCCTGGACTCGCCACCAGGATAACCTTTTTGAGCACGCTCTCGTTCTGGTCCCCGATAATTCTCCTGACCGTTGGATCAAAATCGCCGCTCTTGTTCCTGGTAAATCAGCGGCCGACGTTAGATATCATTATGATGTCTTGGTTTCGGACGTACTGGATATTGACTCTGGACGAGTTGAGTTGCCCAATTATGCTGATGACTTGACGGTGGCCAAATCGTCGGAGAGGGAGAGGTCGCCGCCGTCGCCACGTCCAGTATCGGAGAAAACCTCGACGACTGAGAGGAAAAAGGGGAAACCCTGGACGAAAAAGGAACATCAGTACGTTACGTTACTTCAACTTAATTTAGCCTCTCCTATATGATTATTATTAATATTCTTTAGTACATATATAACTATTTTAAAATACCATTTTAAATAGTTTGATTTCTAAAAACTCTTTTGCCAATTCTTAATTATAATCATAGTTCAACTATTACTACCTAAATTTAAGATTTATCAAATGACGCATGAAAATTTATAGTTGTATCAAAGTTGAAACTAAGTTAAAAGCATGTGTTTATATTAGTATAACTTCCATCTCTTAATATTCAATCACTCACTTCATAATTTTTCAACTATAAAAGTAAAAGAATTATATTCAATAAAAGGTTGATGATTATATATTTTATTCAAGAGATTAGTTTAAAACTTTGTAATTGTAACTATTATTTATTAGCATTTTCATGGTAGATTTTAGCAAACACGTTTATTTATTTTTAGCATTGAAATTATTGATATTATTAAAAAATTATATATAAAATCAACTTCTTAGAACTAATAAATTTTAAGATTTATAAAAGTATTTTGATATAACGATCATAATGACAGAAATGTATGTTAACCCATTAATATTTTAAAGTGTCAATTACTTGCTAAAATTGGATGACTTATTATTATTTAACTATATAAAAATTGAAAGTTAGACAAAAAATAAATAGAAATATTTGATATGTATAAGAAAAGAAATTCAAATGAATTTTCCAAATGTGGCAGGCTGTTTTTATTAGGGCTGAAGAAATTTGGAAAGGGAGATTGGAGAAGCATTTCTAGAAATGCGGTGATTACAAGAACTCCAACTCAAGTAGCAAGTCATGCTCAAAAATATTTTCTTCGTCAAGAATCTGCCAAAAAGGATCGAAAAAGATCAAGTATTCACGATATCACCACCGTAGAAGGCAGTTTAGTAACGACGTCAACAACTGCTATCGGTCAAAGTCAACCAAGTATTTTGTCAGTGACTCAACCGCTATCGTCGTCGTTTCCACTACATATGCGACACCAATTTGCATCTTCAGGCTATTTTCCTTACCGAAGAAGTTTGTTGGATTACTAAAGCATGGAGTTATTTAATCATACGCAAACGTAGAATATATAATTGAGTATACGGTATACCATATTGTTTTTTTATAAAATACTATAGTTGTATGCAAAAGAAAATGGCAAAAGTTCACTTTATTGAGATTTTGTCGTTTTTG ATGGAACCCCATTCTCCTTCCTTCGGCCTTTTCCCTGTCGCTTCACTTTCTTCTCCCACTCCCTGGACTCGCCACCAGGATAACCTTTTTGAGCACGCTCTCGTTCTGGTCCCCGATAATTCTCCTGACCGTTGGATCAAAATCGCCGCTCTTGTTCCTGGTAAATCAGCGGCCGACGTTAGATATCATTATGATGTCTTGGTTTCGGACGTACTGGATATTGACTCTGGACGAGTTGAGTTGCCCAATTATGCTGATGACTTGACGGTGGCCAAATCGTCGGAGAGGGAGAGGTCGCCGCCGTCGCCACGTCCAGTATCGGAGAAAACCTCGACGACTGAGAGGAAAAAGGGGAAACCCTGGACGAAAAAGGAACATCAGCTGTTTTTATTAGGGCTGAAGAAATTTGGAAAGGGAGATTGGAGAAGCATTTCTAGAAATGCGGTGATTACAAGAACTCCAACTCAAGTAGCAAGTCATGCTCAAAAATATTTTCTTCGTCAAGAATCTGCCAAAAAGGATCGAAAAAGATCAAGTATTCACGATATCACCACCGTAGAAGGCAGTTTAGTAACGACGTCAACAACTGCTATCGGTCAAAGTCAACCAAGTATTTTGTCAGTGACTCAACCGCTATCGTCGTCGTTTCCACTACATATGCGACACCAATTTGCATCTTCAGGCTATTTTCCTTACCGAAGAAGTTTGTTGGATTACTAA ATGGAACCCCATTCTCCTTCCTTCGGCCTTTTCCCTGTCGCTTCACTTTCTTCTCCCACTCCCTGGACTCGCCACCAGGATAACCTTTTTGAGCACGCTCTCGTTCTGGTCCCCGATAATTCTCCTGACCGTTGGATCAAAATCGCCGCTCTTGTTCCTGGTAAATCAGCGGCCGACGTTAGATATCATTATGATGTCTTGGTTTCGGACGTACTGGATATTGACTCTGGACGAGTTGAGTTGCCCAATTATGCTGATGACTTGACGGTGGCCAAATCGTCGGAGAGGGAGAGGTCGCCGCCGTCGCCACGTCCAGTATCGGAGAAAACCTCGACGACTGAGAGGAAAAAGGGGAAACCCTGGACGAAAAAGGAACATCAGCTGTTTTTATTAGGGCTGAAGAAATTTGGAAAGGGAGATTGGAGAAGCATTTCTAGAAATGCGGTGATTACAAGAACTCCAACTCAAGTAGCAAGTCATGCTCAAAAATATTTTCTTCGTCAAGAATCTGCCAAAAAGGATCGAAAAAGATCAAGTATTCACGATATCACCACCGTAGAAGGCAGTTTAGTAACGACGTCAACAACTGCTATCGGTCAAAGTCAACCAAGTATTTTGTCAGTGACTCAACCGCTATCGTCGTCGTTTCCACTACATATGCGACACCAATTTGCATCTTCAGGCTATTTTCCTTACCGAAGAAGTTTGTTGGATTACTAA MEPHSPSFGLFPVASLSSPTPWTRHQDNLFEHALVLVPDNSPDRWIKIAALVPGKSAADVRYHYDVLVSDVLDIDSGRVELPNYADDLTVAKSSERERSPPSPRPVSEKTSTTERKKGKPWTKKEHQLFLLGLKKFGKGDWRSISRNAVITRTPTQVASHAQKYFLRQESAKKDRKRSSIHDITTVEGSLVTTSTTAIGQSQPSILSVTQPLSSSFPLHMRHQFASSGYFPYRRSLLDY*
BLAST of Csa6G495660 vs. Swiss-Prot
Match: DIV_ANTMA (Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA PE=2 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 1.1e-42 Identity = 98/214 (45.79%), Postives = 131/214 (61.21%), Query Frame = 1
BLAST of Csa6G495660 vs. Swiss-Prot
Match: MY1R1_SOLTU (Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 1.2e-25 Identity = 60/113 (53.10%), Postives = 76/113 (67.26%), Query Frame = 1
BLAST of Csa6G495660 vs. Swiss-Prot
Match: RADL6_ARATH (Protein RADIALIS-like 6 OS=Arabidopsis thaliana GN=RL6 PE=2 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 1.4e-13 Identity = 34/70 (48.57%), Postives = 48/70 (68.57%), Query Frame = 1
BLAST of Csa6G495660 vs. Swiss-Prot
Match: RADL3_ARATH (Protein RADIALIS-like 3 OS=Arabidopsis thaliana GN=RL3 PE=2 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 1.8e-13 Identity = 36/70 (51.43%), Postives = 45/70 (64.29%), Query Frame = 1
BLAST of Csa6G495660 vs. Swiss-Prot
Match: MYBJ_DICDI (Myb-like protein J OS=Dictyostelium discoideum GN=mybJ PE=3 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 3.4e-12 Identity = 43/102 (42.16%), Postives = 61/102 (59.80%), Query Frame = 1
BLAST of Csa6G495660 vs. TrEMBL
Match: A0A0A0KJP9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G495660 PE=4 SV=1) HSP 1 Score: 483.4 bits (1243), Expect = 1.6e-133 Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 1
BLAST of Csa6G495660 vs. TrEMBL
Match: V4U9T9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016071mg PE=4 SV=1) HSP 1 Score: 235.7 bits (600), Expect = 5.8e-59 Identity = 128/226 (56.64%), Postives = 149/226 (65.93%), Query Frame = 1
BLAST of Csa6G495660 vs. TrEMBL
Match: A0A151TQ52_CAJCA (Myb-like protein J OS=Cajanus cajan GN=KK1_008325 PE=4 SV=1) HSP 1 Score: 232.6 bits (592), Expect = 4.9e-58 Identity = 126/235 (53.62%), Postives = 149/235 (63.40%), Query Frame = 1
BLAST of Csa6G495660 vs. TrEMBL
Match: A0A0A0KE73_CUCSA (Syringolide-induced protein 1-3-1B OS=Cucumis sativus GN=Csa_6G046240 PE=4 SV=1) HSP 1 Score: 232.6 bits (592), Expect = 4.9e-58 Identity = 126/220 (57.27%), Postives = 151/220 (68.64%), Query Frame = 1
BLAST of Csa6G495660 vs. TrEMBL
Match: A0A0S3SLK8_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G025600 PE=4 SV=1) HSP 1 Score: 227.3 bits (578), Expect = 2.0e-56 Identity = 122/222 (54.95%), Postives = 148/222 (66.67%), Query Frame = 1
BLAST of Csa6G495660 vs. TAIR10
Match: AT5G04760.1 (AT5G04760.1 Duplicated homeodomain-like superfamily protein) HSP 1 Score: 207.6 bits (527), Expect = 8.5e-54 Identity = 103/169 (60.95%), Postives = 125/169 (73.96%), Query Frame = 1
BLAST of Csa6G495660 vs. TAIR10
Match: AT5G58900.1 (AT5G58900.1 Homeodomain-like transcriptional regulator) HSP 1 Score: 180.6 bits (457), Expect = 1.1e-45 Identity = 97/209 (46.41%), Postives = 133/209 (63.64%), Query Frame = 1
BLAST of Csa6G495660 vs. TAIR10
Match: AT3G11280.1 (AT3G11280.1 Duplicated homeodomain-like superfamily protein) HSP 1 Score: 178.7 bits (452), Expect = 4.2e-45 Identity = 87/170 (51.18%), Postives = 116/170 (68.24%), Query Frame = 1
BLAST of Csa6G495660 vs. TAIR10
Match: AT5G08520.1 (AT5G08520.1 Duplicated homeodomain-like superfamily protein) HSP 1 Score: 177.6 bits (449), Expect = 9.4e-45 Identity = 98/191 (51.31%), Postives = 119/191 (62.30%), Query Frame = 1
BLAST of Csa6G495660 vs. TAIR10
Match: AT2G38090.1 (AT2G38090.1 Duplicated homeodomain-like superfamily protein) HSP 1 Score: 171.8 bits (434), Expect = 5.2e-43 Identity = 86/182 (47.25%), Postives = 115/182 (63.19%), Query Frame = 1
BLAST of Csa6G495660 vs. NCBI nr
Match: gi|449448460|ref|XP_004141984.1| (PREDICTED: transcription factor DIVARICATA-like [Cucumis sativus]) HSP 1 Score: 483.4 bits (1243), Expect = 2.3e-133 Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 1
BLAST of Csa6G495660 vs. NCBI nr
Match: gi|659079695|ref|XP_008440393.1| (PREDICTED: transcription factor DIVARICATA-like [Cucumis melo]) HSP 1 Score: 414.1 bits (1063), Expect = 1.7e-112 Identity = 204/234 (87.18%), Postives = 215/234 (91.88%), Query Frame = 1
BLAST of Csa6G495660 vs. NCBI nr
Match: gi|568864124|ref|XP_006485458.1| (PREDICTED: transcription factor DIVARICATA [Citrus sinensis]) HSP 1 Score: 235.7 bits (600), Expect = 8.3e-59 Identity = 128/226 (56.64%), Postives = 149/226 (65.93%), Query Frame = 1
BLAST of Csa6G495660 vs. NCBI nr
Match: gi|567906885|ref|XP_006445756.1| (hypothetical protein CICLE_v10016071mg [Citrus clementina]) HSP 1 Score: 235.7 bits (600), Expect = 8.3e-59 Identity = 128/226 (56.64%), Postives = 149/226 (65.93%), Query Frame = 1
BLAST of Csa6G495660 vs. NCBI nr
Match: gi|1012357956|gb|KYP69140.1| (Myb-like protein J [Cajanus cajan]) HSP 1 Score: 232.6 bits (592), Expect = 7.0e-58 Identity = 126/235 (53.62%), Postives = 149/235 (63.40%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |