Csa6G494930 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCAAGTTAACAAAACGCTTCGGAACTCGGTAAATAGGAGGAGCAAATAAGGAAGAGATCGGTGATTGCATCAAAGGAAAGAAGCATGAAAGGCAAAAGCGGAAGAAGTAATTGGAGCTTGAGATCGAAGCTAGGTTTGCCCGCACTAATCTTCGTTTTATGCCTTTTTTGTTTCCTCGCCGGATTCTTCGGTTCTACTCTTCTCTCTCAGGTTGATCCGTGTGCTTCAAGTTTCCAATCACCGTTAGATTTCGTTGCTTCAATGCTTATACTGTAATTTTCGGATTATCTCATTGTTATCGGACGATTGAACAGGATGTAGATGACGATAGGCCGAGGGCGAGGTTGCTTCAATCGGCAAGCGATGTTACGGAGTTTGATTTGATGTCTTCGGGAGAAAACGGCGACGATTCCATTTCTTCGATTCCTTTTCAGGTGCTCTCCGTTTCGTTTTAATTATTAATTACATCTGGTATGTTAGTTTCACCGCATTGTCAAACAGACTAAGTTGTTTTTTAAGGATTGCATGCATTTGTGCGAACATCATTTATCGACGGATGAACCTTGCAACTCATCATTCGATCTTCAGTGATCATGATTTGTTGTTTAGATTATTGCACGTCTAATTTAAAGTTTCCTTTAATGGAGGTTTTGAGCTGGCGACCTCGCGCACTTTATTTCCCCAAGTTTGCAACTGCGGAGCAATGTCAGAGTATAGTTAATTTGGCGAAACCGAAGCTTAGGCCGTCTACATTGGCTCTACGTAAGGGAGAAACCGCAGAGAGCACGAAAGGAGTCCGAACAAGGTATCTTCTGTCTGTCTGTCTGTATTGGCACTTATGATTTTATCAATTATCATCCATTATTCTTTGCACGGCCTCAACATAAGTTTCTTCCTGTACTTCCATTTATAACCAAACTCTGTCCATATATGCGATCTGTTATGGTATGAGAAATTATCCATCGAGATTTCTGAAGTTCAGCTTAGTTATAGATAGTTTCTTTTTAATTCGACTCTTTGGTCACTCTCACCTATGATGTTTATTGGAATTCCGTTTGAACTCCTAGGCATTGGTTTTGGGAACTTCCATCCGCTTTTGTAATTTTACATTATCCATGCAGTTTATTCATATCTAGAATATTTATGTTTCCATTGTAGTTTCTTTATTCTGTTTCGTAATTCGACCAAAATTCCAGGTTAGCCATGGCTATTGGCAAAACTGGAAAATTTTTATTACTTCGTTTTTGGTTTTCGGCTTCATGTATAGAAGGCTCTAGTGGTTATAATGCACGATCTTCTAAATTCTTGGTTATACTCGGGTTATAGGGATATAGAATTTTGTAGAGATGCTTACGTTTGCAATTTGATTCTTTTCTCTTCTCCGCCCCAAGCAGTTCTGGAGTGTTCTTTAGTGCTTCAGAAGATGAAAGTGGGACTCTGGGTGTAATTGAGGAAAAAATTGCAAGGGCAACTATGATTCCAAGGACGCATGGAGAGGTATTTTTACCACTTTGATCATCAATATTTCCACCCTGTTTTCTTAAGGTAGAAATCTGTTGGTACATCATTCATAAGAGTCTAAAGTTTCAAAAGAACTTGGTTCTAGAATCCTGAGTATGTTTGATGTAAATTTTGATAGGGAGTGTCATGGATTTGAACTCTTTCACTACCACGGAGAAGATGAACCCATTAGCAAGTCATTTCTAACTTGCTTATTAATTTATTGCATCCATCTCTATAGTAGCTGGTCATTGGCCTTCTTCAAATTTAATGCTTAACATGGGATCTTGACCATTAATTTCTTATAGTTGATGGGATTTATATAAATCCACTATGTAGTCAGATTCTGTTTGTTATTTTAAGCTGAGATTAAAGTTTTCTCAAACTTCTCATTTCTTGTTCAAACTTCTGACAGTTTGACAACTTAAAAGAGGATCAGTGTTACCTCTTCACATTTCTTGACTAAATACCAAGGTACACAATAGTAAGTAGTAACAGGTGACATAAAACCTGAGATAATTAGTCATTGTGTTCTATCCATTTGATGGACCTGATACTTTATATATTTCTTTTAATTGTTTGTAGAAATCTGTTATAGAATAGTATGCTTAATTTCATAGTTAATTTATTTACAGGTTACATTTCCACTTGATGTTTTATGTTTTAAGGATGTTTTCTTGCATCTGTAAAAAGTATAGAACTTCTTGTTTCCAAATGTTTTAAAATTGATTGAGGATTGTGTGTTTCAGGCATATAATATTTTGCGTTATGAGATTGGGCAGAAGTATAATTCTCATTATGATGCGTTCAAGCCTTCTGAATATGGGCCACAGAAGAGCCAGAGGGTACAACGTAGATATATTAGCTTTTCCTTTGCTTATTGCTCGTAAACATTCAACATTCAATTCTTTTCATTCATTTATAAGAGCTCTGTTACAGAAATATTTTGATCCCCTCCCAAAAAAGGGGGGAGATAGAATTTTGCACTACTTTCCCTGACATTTTAGCATTAAAAAATTCAGGTGGCTTCTTTCTTGTTGTACTTGACTGATGTTGAAGAAGGTGGAGAAACCATGTTTCCATTTGAGGTAAGAGTAGACCACCATAGGACCGTATGAACGAGGTGGCCTTTCTCTTGACATTTTTTACAACCAAGAACATTAGTCAAATGGAGTATTTACTGTGTTTGATTGGCAGAATGGCTTGAACATGGATGGAACCTATAATTTCCAAACATGTATTGGTTTGAAAGTGAAGCCACGTCAAGGTGATGGACTTCTGTTTTATTCGGTTTTCCCAAATGGTACAATTGATCCGGTTAGTGTTCCTATTCCTATCCTCTTTTGCTTGATATAGTAGTTTCAATTTGAATGCTGTCTGGATTAATGATGTGTAATGTGTAATGTGTATTGTCGAACCATGAGCTAACAAGGAGCATCTATGCTTTGTTTGAGCATGAAGCTTCTCGATTTATGATAGACTCTCTATTAAACATGTTTATAAGAGGAGGCAGTGAGGCACTGAAAGAGGTAGTGAGGAATAACAGGCTATGAGAAGCTAGTTAGAACTAGAAAGGTGAGCCCAAGTGAAGGTAATAAGAGGTGGGGTGTGAATAGAAGGAAATATATTGTCAGAGAACGAGTTGGAGATTGGTTACTAAGTCCATAAGTTTCGTACTTGAGAAAGTGGAAGCTTTCTAAATCCATCGACCCATCACCTTTCTTGATTAATAAATCTCACTCATCAATTTACGGGTAGGAGCCTAAATCTGCCATGAAAACCAGAATTAGCACATGTTTGTAACAAAGAACAGTAGACTATATCAAAACTACGAACTAATATCATATGCTAGTACAGTAGAAGTTGAAATCAAGGATTACCAAGATCCCAGTCATTAGAAGGAAAAAAACCAAAGTTGTATGACACTAAAGAGCCTTTGGAGAGGACCATCTTCTGTCCCAATTTTCACGATGGATCTGTTCCCAAATAAAGATGTTATAAGGTGATGGTCGTTAGGAAGGATAGGCGTTAGGCACATATTGTGATCAGCATGTAGAGGTGTTGCCGTGTTGGACACAGACATGCTTCAGACACGTATTTTAAGGGTCAAATTTACTTTTAATTTGTTGAGTTTTTATGTTTTGGTGCTGCTGCGGCGTGTCACTCATTCAATGTTGAGACTCATCTTGTTTAGAAAATACAGAAATTAAAATAAAAAGATATATATTTTTTAACTACAACATTTGAGTTCCTAGTAATTAATTAATATATGAAAACTTTCTGAAACTAAACATTTTTTTTAAAGAAAACTAATGAACTTACATCTAACCAAACCCAGCTACATGGTGTTGGAAAATGAGAGTTTATTTGGTTGGGGACTTGTTCTATCTGATAATCTGACCTCGCAACGTTGGGCTCAGGAGACTATTTATTAATATTGTAAGCGGTAGTGTTGAGTTCGAACAAATAAAGAGACTCCATTAAGATTAAGAGATGCATAGGTTATGTTAGTATCTTATGCCGAATCTCATGTTTATTATGCAAAGTCGGCCTTACAGCATGCATGTATTTAAGGTATAGCAATTATTTTGAAAAACATATTTTGTGGACCATTCATTGTTTATGTTATATGCATGTTTGTGCTTTCGTGTTTGCTTGTGTCATTTAGAAGAATTATGATGTAAAGTTTTATATATCAAGAATGGTTTACGAATTAAATGGGTACTGTTGTGTACAGCATTTTGGTTGCTGAGAATCTCATTTATTGCATAATTTTGTAGACATCACTTCATGGAAGCTGCCCTGTGATCAAAGGGCAGAAATGGGTGGCGACCAAGTGGATCAGAGATCAAATGCAGGAGGACTTTTTATACTAAATGCAATTCATAAGCCGTAAATTTCTTCCTCATAATTTTCTCTGTATGATAGAATGAGTTCAAATATTATACAAATTTTGTTTCCCACGCTCTCCTCCTTACCTTACCGATTACATATAGGGTAGTTATTAAGGTTAGAATGTTTTTCCAATTCAGTTTATTGTGTAAAATATTCAGATTATTTTCAAATTAATCAATCAAAATCAAAATATTAGTCTATAA ATGAAAGGCAAAAGCGGAAGAAGTAATTGGAGCTTGAGATCGAAGCTAGGTTTGCCCGCACTAATCTTCGTTTTATGCCTTTTTTGTTTCCTCGCCGGATTCTTCGGTTCTACTCTTCTCTCTCAGGATGTAGATGACGATAGGCCGAGGGCGAGGTTGCTTCAATCGGCAAGCGATGTTACGGAGTTTGATTTGATGTCTTCGGGAGAAAACGGCGACGATTCCATTTCTTCGATTCCTTTTCAGGTTTTGAGCTGGCGACCTCGCGCACTTTATTTCCCCAAGTTTGCAACTGCGGAGCAATGTCAGAGTATAGTTAATTTGGCGAAACCGAAGCTTAGGCCGTCTACATTGGCTCTACGTAAGGGAGAAACCGCAGAGAGCACGAAAGGAGTCCGAACAAGTTCTGGAGTGTTCTTTAGTGCTTCAGAAGATGAAAGTGGGACTCTGGGTGTAATTGAGGAAAAAATTGCAAGGGCAACTATGATTCCAAGGACGCATGGAGAGGCATATAATATTTTGCGTTATGAGATTGGGCAGAAGTATAATTCTCATTATGATGCGTTCAAGCCTTCTGAATATGGGCCACAGAAGAGCCAGAGGGTGGCTTCTTTCTTGTTGTACTTGACTGATGTTGAAGAAGGTGGAGAAACCATGTTTCCATTTGAGAATGGCTTGAACATGGATGGAACCTATAATTTCCAAACATGTATTGGTTTGAAAGTGAAGCCACGTCAAGGTGATGGACTTCTGTTTTATTCGGTTTTCCCAAATGGTACAATTGATCCGACATCACTTCATGGAAGCTGCCCTGTGATCAAAGGGCAGAAATGGGTGGCGACCAAGTGGATCAGAGATCAAATGCAGGAGGACTTTTTATACTAA ATGAAAGGCAAAAGCGGAAGAAGTAATTGGAGCTTGAGATCGAAGCTAGGTTTGCCCGCACTAATCTTCGTTTTATGCCTTTTTTGTTTCCTCGCCGGATTCTTCGGTTCTACTCTTCTCTCTCAGGATGTAGATGACGATAGGCCGAGGGCGAGGTTGCTTCAATCGGCAAGCGATGTTACGGAGTTTGATTTGATGTCTTCGGGAGAAAACGGCGACGATTCCATTTCTTCGATTCCTTTTCAGGTTTTGAGCTGGCGACCTCGCGCACTTTATTTCCCCAAGTTTGCAACTGCGGAGCAATGTCAGAGTATAGTTAATTTGGCGAAACCGAAGCTTAGGCCGTCTACATTGGCTCTACGTAAGGGAGAAACCGCAGAGAGCACGAAAGGAGTCCGAACAAGTTCTGGAGTGTTCTTTAGTGCTTCAGAAGATGAAAGTGGGACTCTGGGTGTAATTGAGGAAAAAATTGCAAGGGCAACTATGATTCCAAGGACGCATGGAGAGGCATATAATATTTTGCGTTATGAGATTGGGCAGAAGTATAATTCTCATTATGATGCGTTCAAGCCTTCTGAATATGGGCCACAGAAGAGCCAGAGGGTGGCTTCTTTCTTGTTGTACTTGACTGATGTTGAAGAAGGTGGAGAAACCATGTTTCCATTTGAGAATGGCTTGAACATGGATGGAACCTATAATTTCCAAACATGTATTGGTTTGAAAGTGAAGCCACGTCAAGGTGATGGACTTCTGTTTTATTCGGTTTTCCCAAATGGTACAATTGATCCGACATCACTTCATGGAAGCTGCCCTGTGATCAAAGGGCAGAAATGGGTGGCGACCAAGTGGATCAGAGATCAAATGCAGGAGGACTTTTTATACTAA MKGKSGRSNWSLRSKLGLPALIFVLCLFCFLAGFFGSTLLSQDVDDDRPRARLLQSASDVTEFDLMSSGENGDDSISSIPFQVLSWRPRALYFPKFATAEQCQSIVNLAKPKLRPSTLALRKGETAESTKGVRTSSGVFFSASEDESGTLGVIEEKIARATMIPRTHGEAYNILRYEIGQKYNSHYDAFKPSEYGPQKSQRVASFLLYLTDVEEGGETMFPFENGLNMDGTYNFQTCIGLKVKPRQGDGLLFYSVFPNGTIDPTSLHGSCPVIKGQKWVATKWIRDQMQEDFLY*
BLAST of Csa6G494930 vs. Swiss-Prot
Match: P4H9_ARATH (Probable prolyl 4-hydroxylase 9 OS=Arabidopsis thaliana GN=P4H9 PE=2 SV=1) HSP 1 Score: 405.2 bits (1040), Expect = 6.1e-112 Identity = 198/280 (70.71%), Postives = 226/280 (80.71%), Query Frame = 1
BLAST of Csa6G494930 vs. Swiss-Prot
Match: P4H13_ARATH (Prolyl 4-hydroxylase 13 OS=Arabidopsis thaliana GN=P4H13 PE=2 SV=1) HSP 1 Score: 316.6 bits (810), Expect = 2.8e-85 Identity = 158/280 (56.43%), Postives = 201/280 (71.79%), Query Frame = 1
BLAST of Csa6G494930 vs. Swiss-Prot
Match: P4H10_ARATH (Probable prolyl 4-hydroxylase 10 OS=Arabidopsis thaliana GN=P4H10 PE=2 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 4.4e-46 Identity = 107/237 (45.15%), Postives = 140/237 (59.07%), Query Frame = 1
BLAST of Csa6G494930 vs. Swiss-Prot
Match: P4H3_ARATH (Probable prolyl 4-hydroxylase 3 OS=Arabidopsis thaliana GN=P4H3 PE=2 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 3.7e-45 Identity = 112/272 (41.18%), Postives = 153/272 (56.25%), Query Frame = 1
BLAST of Csa6G494930 vs. Swiss-Prot
Match: P4H5_ARATH (Prolyl 4-hydroxylase 5 OS=Arabidopsis thaliana GN=P4H5 PE=2 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 1.9e-41 Identity = 100/277 (36.10%), Postives = 153/277 (55.23%), Query Frame = 1
BLAST of Csa6G494930 vs. TrEMBL
Match: A0A0A0KGG4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G494930 PE=4 SV=1) HSP 1 Score: 597.8 bits (1540), Expect = 7.1e-168 Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 1
BLAST of Csa6G494930 vs. TrEMBL
Match: A0A059AL93_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I00722 PE=4 SV=1) HSP 1 Score: 449.9 bits (1156), Expect = 2.4e-123 Identity = 214/291 (73.54%), Postives = 250/291 (85.91%), Query Frame = 1
BLAST of Csa6G494930 vs. TrEMBL
Match: V4SQB7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10027070mg PE=4 SV=1) HSP 1 Score: 447.2 bits (1149), Expect = 1.5e-122 Identity = 212/289 (73.36%), Postives = 252/289 (87.20%), Query Frame = 1
BLAST of Csa6G494930 vs. TrEMBL
Match: B9T4J5_RICCO (Prolyl 4-hydroxylase alpha subunit, putative OS=Ricinus communis GN=RCOM_0396560 PE=4 SV=1) HSP 1 Score: 446.4 bits (1147), Expect = 2.6e-122 Identity = 209/291 (71.82%), Postives = 252/291 (86.60%), Query Frame = 1
BLAST of Csa6G494930 vs. TrEMBL
Match: A0A067GJZ0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022995mg PE=4 SV=1) HSP 1 Score: 446.4 bits (1147), Expect = 2.6e-122 Identity = 212/289 (73.36%), Postives = 251/289 (86.85%), Query Frame = 1
BLAST of Csa6G494930 vs. TAIR10
Match: AT4G33910.1 (AT4G33910.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 405.2 bits (1040), Expect = 3.4e-113 Identity = 198/280 (70.71%), Postives = 226/280 (80.71%), Query Frame = 1
BLAST of Csa6G494930 vs. TAIR10
Match: AT2G23096.1 (AT2G23096.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 316.6 bits (810), Expect = 1.6e-86 Identity = 158/280 (56.43%), Postives = 201/280 (71.79%), Query Frame = 1
BLAST of Csa6G494930 vs. TAIR10
Match: AT5G66060.1 (AT5G66060.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 186.4 bits (472), Expect = 2.5e-47 Identity = 107/237 (45.15%), Postives = 140/237 (59.07%), Query Frame = 1
BLAST of Csa6G494930 vs. TAIR10
Match: AT1G20270.1 (AT1G20270.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 183.3 bits (464), Expect = 2.1e-46 Identity = 112/272 (41.18%), Postives = 153/272 (56.25%), Query Frame = 1
BLAST of Csa6G494930 vs. TAIR10
Match: AT2G17720.1 (AT2G17720.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 171.0 bits (432), Expect = 1.1e-42 Identity = 100/277 (36.10%), Postives = 153/277 (55.23%), Query Frame = 1
BLAST of Csa6G494930 vs. NCBI nr
Match: gi|449448264|ref|XP_004141886.1| (PREDICTED: probable prolyl 4-hydroxylase 9 [Cucumis sativus]) HSP 1 Score: 597.8 bits (1540), Expect = 1.0e-167 Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 1
BLAST of Csa6G494930 vs. NCBI nr
Match: gi|659079617|ref|XP_008440351.1| (PREDICTED: prolyl 4-hydroxylase subunit alpha-1-like [Cucumis melo]) HSP 1 Score: 566.6 bits (1459), Expect = 2.5e-158 Identity = 275/292 (94.18%), Postives = 285/292 (97.60%), Query Frame = 1
BLAST of Csa6G494930 vs. NCBI nr
Match: gi|1011995519|ref|XP_015956578.1| (PREDICTED: probable prolyl 4-hydroxylase 9 [Arachis duranensis]) HSP 1 Score: 461.8 bits (1187), Expect = 8.7e-127 Identity = 224/295 (75.93%), Postives = 261/295 (88.47%), Query Frame = 1
BLAST of Csa6G494930 vs. NCBI nr
Match: gi|1009145471|ref|XP_015890355.1| (PREDICTED: probable prolyl 4-hydroxylase 9 [Ziziphus jujuba]) HSP 1 Score: 450.3 bits (1157), Expect = 2.6e-123 Identity = 213/292 (72.95%), Postives = 256/292 (87.67%), Query Frame = 1
BLAST of Csa6G494930 vs. NCBI nr
Match: gi|702461068|ref|XP_010028119.1| (PREDICTED: probable prolyl 4-hydroxylase 9 [Eucalyptus grandis]) HSP 1 Score: 449.9 bits (1156), Expect = 3.4e-123 Identity = 214/291 (73.54%), Postives = 250/291 (85.91%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |