Csa6G492300 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G492300
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 23734922 .. 23735155 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGCGGACGCGTAGCCGTGTCGTGAGGAGAGGAGGGCAAGGGGAGCCCACAATGGGTGCCAGATCAGATTGGGGGAACTTTACAGCTGAATTTGTCCAGCGGAGACAAAGACGGGTGCCGACTGGAGTAGACAACTCGTAAGCAAGGGAAGGACGGCCAACGGTGTGATGTATTAACCAATCATTCATGTTTGTTTTCAGTGCTATTTTTAGTGTCAAACGCCATGGCTGA

mRNA sequence

ATGGGGCGGACGCGTAGCCGTGTCGTGAGGAGAGGAGGGCAAGGGGAGCCCACAATGGGTGCCAGATCAGATTGGGGGAACTTTACAGCTGAATTTGTCCAGCGGAGACAAAGACGGGTGCCGACTGGAGTAGACAACTCTGCTATTTTTAGTGTCAAACGCCATGGCTGA

Coding sequence (CDS)

ATGGGGCGGACGCGTAGCCGTGTCGTGAGGAGAGGAGGGCAAGGGGAGCCCACAATGGGTGCCAGATCAGATTGGGGGAACTTTACAGCTGAATTTGTCCAGCGGAGACAAAGACGGGTGCCGACTGGAGTAGACAACTCTGCTATTTTTAGTGTCAAACGCCATGGCTGA

Protein sequence

MGRTRSRVVRRGGQGEPTMGARSDWGNFTAEFVQRRQRRVPTGVDNSAIFSVKRHG*
Homology
[Close]
BLAST of Csa6G492300 vs. TrEMBL
Match: A0A0A0KFV5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G492300 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 4.2e-24
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 1 

Query: 1  MGRTRSRVVRRGGQGEPTMGARSDWGNFTAEFVQRRQRRVPTGVDNSAIFSVKRHG 57
          MGRTRSRVVRRGGQGEPTMGARSDWGNFTAEFVQRRQRRVPTGVDNSAIFSVKRHG
Sbjct: 1  MGRTRSRVVRRGGQGEPTMGARSDWGNFTAEFVQRRQRRVPTGVDNSAIFSVKRHG 56

[Close]
BLAST of Csa6G492300 vs. NCBI nr
Match: gi|700193366|gb|KGN48570.1| (hypothetical protein Csa_6G492300 [Cucumis sativus])

HSP 1 Score: 117.9 bits (294), Expect = 6.0e-24
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 1 

Query: 1  MGRTRSRVVRRGGQGEPTMGARSDWGNFTAEFVQRRQRRVPTGVDNSAIFSVKRHG 57
          MGRTRSRVVRRGGQGEPTMGARSDWGNFTAEFVQRRQRRVPTGVDNSAIFSVKRHG
Sbjct: 1  MGRTRSRVVRRGGQGEPTMGARSDWGNFTAEFVQRRQRRVPTGVDNSAIFSVKRHG 56

The following BLAST results are available for this feature:
BLAST of Csa6G492300 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KFV5_CUCSA4.2e-24100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G492300 PE=4 SV=1[more]
BLAST of Csa6G492300 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700193366|gb|KGN48570.1|6.0e-24100.00hypothetical protein Csa_6G492300 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G492300.1Csa6G492300.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa6G492300CSPI06G28520Wild cucumber (PI 183967)cpicuB313
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa6G492300Watermelon (97103) v2cuwmbB412
Csa6G492300Watermelon (97103) v2cuwmbB494
Csa6G492300Wax gourdcuwgoB577
Csa6G492300Wax gourdcuwgoB621
Csa6G492300Cucumber (Chinese Long) v2cucuB072
Csa6G492300Cucumber (Chinese Long) v2cucuB143
Csa6G492300Cucumber (Chinese Long) v2cucuB173
Csa6G492300Cucumber (Gy14) v1cgycuB121
Csa6G492300Cucumber (Gy14) v1cgycuB552
Csa6G492300Cucurbita maxima (Rimu)cmacuB144
Csa6G492300Cucurbita maxima (Rimu)cmacuB347
Csa6G492300Cucurbita maxima (Rimu)cmacuB560
Csa6G492300Cucurbita maxima (Rimu)cmacuB626
Csa6G492300Cucurbita maxima (Rimu)cmacuB681
Csa6G492300Cucurbita maxima (Rimu)cmacuB775
Csa6G492300Cucurbita maxima (Rimu)cmacuB809
Csa6G492300Cucurbita maxima (Rimu)cmacuB877
Csa6G492300Cucurbita moschata (Rifu)cmocuB176
Csa6G492300Cucurbita moschata (Rifu)cmocuB337
Csa6G492300Cucurbita moschata (Rifu)cmocuB548
Csa6G492300Cucurbita moschata (Rifu)cmocuB617
Csa6G492300Cucurbita moschata (Rifu)cmocuB670
Csa6G492300Cucurbita moschata (Rifu)cmocuB766
Csa6G492300Cucurbita moschata (Rifu)cmocuB801
Csa6G492300Cucurbita moschata (Rifu)cmocuB865
Csa6G492300Melon (DHL92) v3.5.1cumeB470
Csa6G492300Melon (DHL92) v3.5.1cumeB464
Csa6G492300Melon (DHL92) v3.5.1cumeB503
Csa6G492300Watermelon (Charleston Gray)cuwcgB432
Csa6G492300Watermelon (Charleston Gray)cuwcgB503
Csa6G492300Watermelon (97103) v1cuwmB461
Csa6G492300Watermelon (97103) v1cuwmB500
Csa6G492300Cucurbita pepo (Zucchini)cpecuB085
Csa6G492300Cucurbita pepo (Zucchini)cpecuB124
Csa6G492300Cucurbita pepo (Zucchini)cpecuB229
Csa6G492300Cucurbita pepo (Zucchini)cpecuB297
Csa6G492300Cucurbita pepo (Zucchini)cpecuB468
Csa6G492300Cucurbita pepo (Zucchini)cpecuB503
Csa6G492300Cucurbita pepo (Zucchini)cpecuB763
Csa6G492300Bottle gourd (USVL1VR-Ls)culsiB434
Csa6G492300Bottle gourd (USVL1VR-Ls)culsiB474
Csa6G492300Cucumber (Gy14) v2cgybcuB082
Csa6G492300Cucumber (Gy14) v2cgybcuB281
Csa6G492300Melon (DHL92) v3.6.1cumedB445
Csa6G492300Melon (DHL92) v3.6.1cumedB452
Csa6G492300Melon (DHL92) v3.6.1cumedB483
Csa6G492300Silver-seed gourdcarcuB0205
Csa6G492300Silver-seed gourdcarcuB0409
Csa6G492300Silver-seed gourdcarcuB0441
Csa6G492300Silver-seed gourdcarcuB0826