Csa6G491090 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G491090
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 23592164 .. 23592533 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAAGAGGTGTGAATCTGTCAACCACTGGTTGGAAGCTATGCGTTGAATTCCAATCCGGCGTCAAACAAAGCAAAACAACCCCCAAGTGCGGCAAATACAAATGAGATGATGCGTTTCAATCTCATTCAAAACTCTTTCTCTATTTAATTTCATCTCATTTTTCTAAATTCATCTATTGTTACTGTCTCTTTCAGGCATTTCGTCGAGCATCTGGGGCCCCTTCCCTTTCATTTTGGCATAATATCGCCTTCTTCACCGCTTTGTGTGTGTTGTGTGTTGTGTGTGTTTGTGCGCCAAACCAAAGACTCAGACAAAGACATTACCCCCAAGCTTTTCATTCTTAAACTCAAAGCAATTCTTCTCTAA

mRNA sequence

ATGAAAAGAGGTGTGAATCTGTCAACCACTGGTTGGAAGCTATGCGTTGAATTCCAATCCGGCGTCAAACAAAGCAAAACAACCCCCAAGCATTTCGTCGAGCATCTGGGGCCCCTTCCCTTTCATTTTGGCATAATATCGCCTTCTTCACCGCTTTGTGTGTGTTGTGTGTTGTGTGTGTTTGTGCGCCAAACCAAAGACTCAGACAAAGACATTACCCCCAAGCTTTTCATTCTTAAACTCAAAGCAATTCTTCTCTAA

Coding sequence (CDS)

ATGAAAAGAGGTGTGAATCTGTCAACCACTGGTTGGAAGCTATGCGTTGAATTCCAATCCGGCGTCAAACAAAGCAAAACAACCCCCAAGCATTTCGTCGAGCATCTGGGGCCCCTTCCCTTTCATTTTGGCATAATATCGCCTTCTTCACCGCTTTGTGTGTGTTGTGTGTTGTGTGTGTTTGTGCGCCAAACCAAAGACTCAGACAAAGACATTACCCCCAAGCTTTTCATTCTTAAACTCAAAGCAATTCTTCTCTAA

Protein sequence

MKRGVNLSTTGWKLCVEFQSGVKQSKTTPKHFVEHLGPLPFHFGIISPSSPLCVCCVLCVFVRQTKDSDKDITPKLFILKLKAILL*
Homology
[Close]
BLAST of Csa6G491090 vs. TrEMBL
Match: A0A0A0KLE1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G491090 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.6e-43
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1 

Query: 1  MKRGVNLSTTGWKLCVEFQSGVKQSKTTPKHFVEHLGPLPFHFGIISPSSPLCVCCVLCV 60
          MKRGVNLSTTGWKLCVEFQSGVKQSKTTPKHFVEHLGPLPFHFGIISPSSPLCVCCVLCV
Sbjct: 1  MKRGVNLSTTGWKLCVEFQSGVKQSKTTPKHFVEHLGPLPFHFGIISPSSPLCVCCVLCV 60

Query: 61 FVRQTKDSDKDITPKLFILKLKAILL 87
          FVRQTKDSDKDITPKLFILKLKAILL
Sbjct: 61 FVRQTKDSDKDITPKLFILKLKAILL 86

[Close]
BLAST of Csa6G491090 vs. NCBI nr
Match: gi|700193342|gb|KGN48546.1| (hypothetical protein Csa_6G491090 [Cucumis sativus])

HSP 1 Score: 181.8 bits (460), Expect = 5.1e-43
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1 

Query: 1  MKRGVNLSTTGWKLCVEFQSGVKQSKTTPKHFVEHLGPLPFHFGIISPSSPLCVCCVLCV 60
          MKRGVNLSTTGWKLCVEFQSGVKQSKTTPKHFVEHLGPLPFHFGIISPSSPLCVCCVLCV
Sbjct: 1  MKRGVNLSTTGWKLCVEFQSGVKQSKTTPKHFVEHLGPLPFHFGIISPSSPLCVCCVLCV 60

Query: 61 FVRQTKDSDKDITPKLFILKLKAILL 87
          FVRQTKDSDKDITPKLFILKLKAILL
Sbjct: 61 FVRQTKDSDKDITPKLFILKLKAILL 86

The following BLAST results are available for this feature:
BLAST of Csa6G491090 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KLE1_CUCSA3.6e-43100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G491090 PE=4 SV=1[more]
BLAST of Csa6G491090 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700193342|gb|KGN48546.1|5.1e-43100.00hypothetical protein Csa_6G491090 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU109681cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G491090.1Csa6G491090.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU109681CU109681transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa6G491090Watermelon (97103) v2cuwmbB412
Csa6G491090Watermelon (97103) v2cuwmbB462
Csa6G491090Watermelon (97103) v2cuwmbB494
Csa6G491090Wax gourdcuwgoB577
Csa6G491090Wax gourdcuwgoB621
Csa6G491090Wax gourdcuwgoB646
Csa6G491090Cucumber (Chinese Long) v2cucuB072
Csa6G491090Cucumber (Chinese Long) v2cucuB143
Csa6G491090Cucumber (Chinese Long) v2cucuB173
Csa6G491090Cucumber (Gy14) v1cgycuB121
Csa6G491090Cucumber (Gy14) v1cgycuB497
Csa6G491090Cucumber (Gy14) v1cgycuB552
Csa6G491090Cucurbita maxima (Rimu)cmacuB033
Csa6G491090Cucurbita maxima (Rimu)cmacuB144
Csa6G491090Cucurbita maxima (Rimu)cmacuB347
Csa6G491090Cucurbita maxima (Rimu)cmacuB560
Csa6G491090Cucurbita maxima (Rimu)cmacuB626
Csa6G491090Cucurbita maxima (Rimu)cmacuB681
Csa6G491090Cucurbita maxima (Rimu)cmacuB809
Csa6G491090Cucurbita maxima (Rimu)cmacuB877
Csa6G491090Cucurbita moschata (Rifu)cmocuB023
Csa6G491090Cucurbita moschata (Rifu)cmocuB176
Csa6G491090Cucurbita moschata (Rifu)cmocuB337
Csa6G491090Cucurbita moschata (Rifu)cmocuB475
Csa6G491090Cucurbita moschata (Rifu)cmocuB548
Csa6G491090Cucurbita moschata (Rifu)cmocuB617
Csa6G491090Cucurbita moschata (Rifu)cmocuB670
Csa6G491090Cucurbita moschata (Rifu)cmocuB766
Csa6G491090Cucurbita moschata (Rifu)cmocuB801
Csa6G491090Cucurbita moschata (Rifu)cmocuB865
Csa6G491090Melon (DHL92) v3.5.1cumeB470
Csa6G491090Melon (DHL92) v3.5.1cumeB464
Csa6G491090Melon (DHL92) v3.5.1cumeB501
Csa6G491090Melon (DHL92) v3.5.1cumeB503
Csa6G491090Watermelon (Charleston Gray)cuwcgB432
Csa6G491090Watermelon (Charleston Gray)cuwcgB471
Csa6G491090Watermelon (Charleston Gray)cuwcgB503
Csa6G491090Watermelon (97103) v1cuwmB461
Csa6G491090Watermelon (97103) v1cuwmB495
Csa6G491090Watermelon (97103) v1cuwmB500
Csa6G491090Cucurbita pepo (Zucchini)cpecuB085
Csa6G491090Cucurbita pepo (Zucchini)cpecuB124
Csa6G491090Cucurbita pepo (Zucchini)cpecuB229
Csa6G491090Cucurbita pepo (Zucchini)cpecuB256
Csa6G491090Cucurbita pepo (Zucchini)cpecuB297
Csa6G491090Cucurbita pepo (Zucchini)cpecuB468
Csa6G491090Cucurbita pepo (Zucchini)cpecuB503
Csa6G491090Cucurbita pepo (Zucchini)cpecuB583
Csa6G491090Cucurbita pepo (Zucchini)cpecuB686
Csa6G491090Cucurbita pepo (Zucchini)cpecuB763
Csa6G491090Bottle gourd (USVL1VR-Ls)culsiB434
Csa6G491090Bottle gourd (USVL1VR-Ls)culsiB454
Csa6G491090Bottle gourd (USVL1VR-Ls)culsiB474
Csa6G491090Cucumber (Gy14) v2cgybcuB082
Csa6G491090Cucumber (Gy14) v2cgybcuB186
Csa6G491090Cucumber (Gy14) v2cgybcuB281
Csa6G491090Melon (DHL92) v3.6.1cumedB445
Csa6G491090Melon (DHL92) v3.6.1cumedB452
Csa6G491090Melon (DHL92) v3.6.1cumedB481
Csa6G491090Melon (DHL92) v3.6.1cumedB483
Csa6G491090Silver-seed gourdcarcuB0205
Csa6G491090Silver-seed gourdcarcuB0409
Csa6G491090Silver-seed gourdcarcuB0441
Csa6G491090Silver-seed gourdcarcuB0826