Csa6G490900 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G490900
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionRemorin-1 protein; contains IPR005516 (Remorin, C-terminal)
LocationChr6 : 23450753 .. 23454244 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGATTGAAACTGAACATTAGAAATCATCAACCCATGTCTTAAAACTTACCTAAAGCCTAGAAAGAAAGAAAGACCATCTATCCATCAATCCATCAATCCCTTCCGTCAGCCAAAAGACGAACGACATAAGAATTCAAAAAATAAATAATCTCCACATTGGTTGAAGTGCTTTTCAAGATTCCCATCATCTTCACTGCGTAATTCGTCGACTTACATACATTCTCATTTATAATAAAATCTGATGTGATTCTCAATTTGGCCCTGTCCTTCTTTGTTGACCCTTTATTCCAAATCCTCTAATACACTCCATTTTTTAGTAAGCTAACCAAATGGAAACAAAGCTATAGCTATGCTCCCACGCTGCTGTACCTTCTACCTAGCCTCCCGTCAAAAGGAAATAAATTGTAAAAAAGAAAAATAAGTTTCCAATCACTCTCACCGATCATAGCTGTATTGGACAAAAATGGACGGAAGAACAGTGTCAAAAGCAAAATTCTCTGGATAGGGACGTAGGCAAAAAGCAAAATCAAAACACCTTTCTTACTCTTACTGTGTCGTACTGTTCATAATGAAGGAAAGAAGTTGCAGTTCTTCCCACAATTTCAGTGCGTTTCCAAGCCCTGGAGTCCCAAATTACTGGGAAATCAATGTCATGAACCAAAGGGGTTGCAGCTCTGAGAGAATACCTCAGCCTAATAGTAACTCTCGGCGGAGAAATGCTTCTGTCGCTGCCTTGACGCCTTTTTACGGTAGGACATTGCCCTCCAAATGGGAGGATGCTGAGCGATGGATTAGTAGCCCAGTTATGGGCAATGGGTTCAGCAGAAGTTTGCAGTCTCACCTACAGAGAAGACCCAAGTCTAAAAGTGGCCCCATTGGGTCGCCTGGAGTTTCTACTTACTCCAATTATTCACCTGCAATTCCAACGCCCGAGAATGGGGGTTTCGCCGCCACCAAATTAGGCTCTGCTCTTTCCACTGGAGTATTAGTGGCTGATGGGGTTTCCATCTGCTATGGCGGAACCATTGAAAGGGGACAATCTTACCCAGAGTACACCATTCAACGATTAGTATCAGCACCCAGATGGTCAAATATACTAAGCGAGTCGCCGCTGCCGAGCTTCCAAGGTATCCCTTTATTTCCGGGTAGTTTTGAAGCAATCTGTTTAGCTTTTGGCTGCATTGGAAGTCTATCGTCTTAGTATTAAATGATGCTCATGTTGGCTATTTGCATTAATTGTTTATGTTAATTAAAGTACAGTATAGTTTCTATGCGACAGTAATTGAGTTGAAAATCAAGTCTCTCTAGCTTTCATATTTGCTTGTATCACATTAATATTAGATTGTTAGGTTGGAATTGAGCTGTCTCTTCATCTTCATTCTGAAAGAGCTGAACATTGGAGATCTATTTTGTTGGGATATTGAAGATGGTTAGAAATTGTTGGTTCTCAAGATGTTCTTTGTGACACTTGTATCATATCTACAGATGAAAAACTTGGTTGTTCCGAAGAGACAATGGATTCAACTGTTGTTTCACAAAGAAATATGGCAACCCAAATGAGCAGTGAAGATTTCACTCCTTCATCTCCTCAAGGGAATGGTTCGATTTCTTCTTCATCCCCTCCTTCAACACATCAATCTATGGTTGGAAAAGAGAGCGACCATTTTTCTAAACAAGAGGTGAGAGATGTTGAGGTAGATAAGGGTGCTATGATGCAGAGATCCAAAGGACATAAACTCAGATTGAACGAGGAAAACTTTCCACACCATGGAAACTTGGATGAAAACGTTGTGGAAGCTGGAGCTTCGACTCTGGATATTGCAGAGGCAGCTATTCAGGTTTCCAAGTATGTGTTCTTTTGTTCTTATTTCAATGCATAGAATTTAACTTTGAAGTTTTAATTTCGTTGGGTTGTTCTTGAACTTAACTAAATGGTAAAATTAATACTCTTCATTATCTGAGTTGGCATTGGTTCATAGGGATTTTTGCATACAAGTGTGGTCTACCTTTTTGAATACTAGTTTTGTAGTTGTGTTGCTCATTTATCTTGCTTGTTTTTTCGAGTGTTTTGGTGTTTGAGCCAGTTGTTATTTGTTTAATTCCCAGACTAAGGATGGTTGTTTTTGTTGTTGGATTTAGCCATTCTATACTTGGGCTTAGTTGTTCTGTTGGTTGGATTTTAAGTGATTTTTATTGCTTAGTTTATCTATTAGCACTTTTCTAAGTTGGTTTTGAAAGAAGAAATTGATTTCACCAATAATTCAAGTTCAGGATTCAATTCGATAGAACTGAAGCTTTCAATCTAACTCAACTAAGTACATGAATACAAAAACAAACGAACATACAATCTTTTACTTTAGTTCTCTCTAGCATATTATAAATCAATGCCAATCACAGGGTTCATACTTCCAACTTTGCTTGATCTTGATCTCTCTTCCTTTTTAGATTGTATCTGCATACCTAAAAGAATTTAAGCTTCCTATGACTTGTAAAATCAGTTATCTACCGAACATCCTTGAACTGGAATGCCTGGGTTTTTTGCTTAGGAAATAATTCTGTCTGACAACAAAATCCAGTCTTATCTATCATACAATCTCTTGACAGAGTAAAAAAAAGTTTCCACAACTCTAATTGTAATGTTTAGGTTGCAGAGAGAAGAGGCCAAGATAATGGCATGGGAGAATTTGCAGAAGGCGAAAGCTGAAGCTGCAATTCGCAAACTCGAGGTTAGGCCTGCTTTTAGCTCATGTGCAACTTTCACTCTGTTTTATTGGGAAAACATGGAGAGAAAACATAGAGAAATGCTAGAATGTTATAAGAAGTTGCTTCCTCTATTGGTGGATTTTTTTCCCCCAACATTGCATTTGAATTCAAAACAATAGTGTTGTCATGGATGCTGGTCTTGGTCAAATTAGATTGGGAATGTACTAGAACTAGAAGAAGCTATGTGGTTCACTGATGATGAGGCTTGTTGATTCAGATGAAACTTGAAAGAGCAAGATCGTCATCAATGGATAAGATATTGAAGAAGCTGAGGAAAGCACAGATGAAAGCACACAAAATGAGGAGCTCACCTGCAGGCGATCGAAACCAGAGAGTTCGTAACACTAACAACTTTCTCCCATTTCACAAGCACGTGTGGATTGGTTCTCTCAAGCGTTGGTTCATCTGCCATGCTTCCTGATTTCTCAGGGTAGCATCCGATGGTTTCGTCTTAGAAATTTACAGTAGCTTAGTTTGGCCAGTTCTGCGTCATTGTAGCACTTGTTCTAGAAGAAATAATAGTGGCTGGATTATGGCTGTTAAATATTGATGTACCTCATGTTTTGAATTGCCACCCAATGTGATATCAGATTGTAGAAAATGGGTTACTGTCCAGCCATGGCTGAGACATGCCATACAAATGAATCACTCGTCTCGGAGTTGAATTGATAATAATTATAGAGAAGTAATAGAAATCTACAATAAACCTCTCAAATTATTGGCCACCC

mRNA sequence

ATGAAGGAAAGAAGTTGCAGTTCTTCCCACAATTTCAGTGCGTTTCCAAGCCCTGGAGTCCCAAATTACTGGGAAATCAATGTCATGAACCAAAGGGGTTGCAGCTCTGAGAGAATACCTCAGCCTAATAGTAACTCTCGGCGGAGAAATGCTTCTGTCGCTGCCTTGACGCCTTTTTACGGTAGGACATTGCCCTCCAAATGGGAGGATGCTGAGCGATGGATTAGTAGCCCAGTTATGGGCAATGGGTTCAGCAGAAGTTTGCAGTCTCACCTACAGAGAAGACCCAAGTCTAAAAGTGGCCCCATTGGGTCGCCTGGAGTTTCTACTTACTCCAATTATTCACCTGCAATTCCAACGCCCGAGAATGGGGGTTTCGCCGCCACCAAATTAGGCTCTGCTCTTTCCACTGGAGTATTAGTGGCTGATGGGGTTTCCATCTGCTATGGCGGAACCATTGAAAGGGGACAATCTTACCCAGAGTACACCATTCAACGATTAGTATCAGCACCCAGATGGTCAAATATACTAAGCGAGTCGCCGCTGCCGAGCTTCCAAGATGAAAAACTTGGTTGTTCCGAAGAGACAATGGATTCAACTGTTGTTTCACAAAGAAATATGGCAACCCAAATGAGCAGTGAAGATTTCACTCCTTCATCTCCTCAAGGGAATGGTTCGATTTCTTCTTCATCCCCTCCTTCAACACATCAATCTATGGTTGGAAAAGAGAGCGACCATTTTTCTAAACAAGAGGTGAGAGATGTTGAGGTAGATAAGGGTGCTATGATGCAGAGATCCAAAGGACATAAACTCAGATTGAACGAGGAAAACTTTCCACACCATGGAAACTTGGATGAAAACGTTGTGGAAGCTGGAGCTTCGACTCTGGATATTGCAGAGGCAGCTATTCAGGTTTCCAAGTTGCAGAGAGAAGAGGCCAAGATAATGGCATGGGAGAATTTGCAGAAGGCGAAAGCTGAAGCTGCAATTCGCAAACTCGAGATGAAACTTGAAAGAGCAAGATCGTCATCAATGGATAAGATATTGAAGAAGCTGAGGAAAGCACAGATGAAAGCACACAAAATGAGGAGCTCACCTGCAGGCGATCGAAACCAGAGAGTTCGTAACACTAACAACTTTCTCCCATTTCACAAGCACGTGTGGATTGGTTCTCTCAAGCGTTGGTTCATCTGCCATGCTTCCTGA

Coding sequence (CDS)

ATGAAGGAAAGAAGTTGCAGTTCTTCCCACAATTTCAGTGCGTTTCCAAGCCCTGGAGTCCCAAATTACTGGGAAATCAATGTCATGAACCAAAGGGGTTGCAGCTCTGAGAGAATACCTCAGCCTAATAGTAACTCTCGGCGGAGAAATGCTTCTGTCGCTGCCTTGACGCCTTTTTACGGTAGGACATTGCCCTCCAAATGGGAGGATGCTGAGCGATGGATTAGTAGCCCAGTTATGGGCAATGGGTTCAGCAGAAGTTTGCAGTCTCACCTACAGAGAAGACCCAAGTCTAAAAGTGGCCCCATTGGGTCGCCTGGAGTTTCTACTTACTCCAATTATTCACCTGCAATTCCAACGCCCGAGAATGGGGGTTTCGCCGCCACCAAATTAGGCTCTGCTCTTTCCACTGGAGTATTAGTGGCTGATGGGGTTTCCATCTGCTATGGCGGAACCATTGAAAGGGGACAATCTTACCCAGAGTACACCATTCAACGATTAGTATCAGCACCCAGATGGTCAAATATACTAAGCGAGTCGCCGCTGCCGAGCTTCCAAGATGAAAAACTTGGTTGTTCCGAAGAGACAATGGATTCAACTGTTGTTTCACAAAGAAATATGGCAACCCAAATGAGCAGTGAAGATTTCACTCCTTCATCTCCTCAAGGGAATGGTTCGATTTCTTCTTCATCCCCTCCTTCAACACATCAATCTATGGTTGGAAAAGAGAGCGACCATTTTTCTAAACAAGAGGTGAGAGATGTTGAGGTAGATAAGGGTGCTATGATGCAGAGATCCAAAGGACATAAACTCAGATTGAACGAGGAAAACTTTCCACACCATGGAAACTTGGATGAAAACGTTGTGGAAGCTGGAGCTTCGACTCTGGATATTGCAGAGGCAGCTATTCAGGTTTCCAAGTTGCAGAGAGAAGAGGCCAAGATAATGGCATGGGAGAATTTGCAGAAGGCGAAAGCTGAAGCTGCAATTCGCAAACTCGAGATGAAACTTGAAAGAGCAAGATCGTCATCAATGGATAAGATATTGAAGAAGCTGAGGAAAGCACAGATGAAAGCACACAAAATGAGGAGCTCACCTGCAGGCGATCGAAACCAGAGAGTTCGTAACACTAACAACTTTCTCCCATTTCACAAGCACGTGTGGATTGGTTCTCTCAAGCGTTGGTTCATCTGCCATGCTTCCTGA

Protein sequence

MKERSCSSSHNFSAFPSPGVPNYWEINVMNQRGCSSERIPQPNSNSRRRNASVAALTPFYGRTLPSKWEDAERWISSPVMGNGFSRSLQSHLQRRPKSKSGPIGSPGVSTYSNYSPAIPTPENGGFAATKLGSALSTGVLVADGVSICYGGTIERGQSYPEYTIQRLVSAPRWSNILSESPLPSFQDEKLGCSEETMDSTVVSQRNMATQMSSEDFTPSSPQGNGSISSSSPPSTHQSMVGKESDHFSKQEVRDVEVDKGAMMQRSKGHKLRLNEENFPHHGNLDENVVEAGASTLDIAEAAIQVSKLQREEAKIMAWENLQKAKAEAAIRKLEMKLERARSSSMDKILKKLRKAQMKAHKMRSSPAGDRNQRVRNTNNFLPFHKHVWIGSLKRWFICHAS*
Homology
[Close]
BLAST of Csa6G490900 vs. TrEMBL
Match: A0A0A0KLC7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G490900 PE=4 SV=1)

HSP 1 Score: 809.3 bits (2089), Expect = 2.1e-231
Identity = 401/401 (100.00%), Postives = 401/401 (100.00%), Query Frame = 1 

Query: 1   MKERSCSSSHNFSAFPSPGVPNYWEINVMNQRGCSSERIPQPNSNSRRRNASVAALTPFY 60
           MKERSCSSSHNFSAFPSPGVPNYWEINVMNQRGCSSERIPQPNSNSRRRNASVAALTPFY
Sbjct: 1   MKERSCSSSHNFSAFPSPGVPNYWEINVMNQRGCSSERIPQPNSNSRRRNASVAALTPFY 60

Query: 61  GRTLPSKWEDAERWISSPVMGNGFSRSLQSHLQRRPKSKSGPIGSPGVSTYSNYSPAIPT 120
           GRTLPSKWEDAERWISSPVMGNGFSRSLQSHLQRRPKSKSGPIGSPGVSTYSNYSPAIPT
Sbjct: 61  GRTLPSKWEDAERWISSPVMGNGFSRSLQSHLQRRPKSKSGPIGSPGVSTYSNYSPAIPT 120

Query: 121 PENGGFAATKLGSALSTGVLVADGVSICYGGTIERGQSYPEYTIQRLVSAPRWSNILSES 180
           PENGGFAATKLGSALSTGVLVADGVSICYGGTIERGQSYPEYTIQRLVSAPRWSNILSES
Sbjct: 121 PENGGFAATKLGSALSTGVLVADGVSICYGGTIERGQSYPEYTIQRLVSAPRWSNILSES 180

Query: 181 PLPSFQDEKLGCSEETMDSTVVSQRNMATQMSSEDFTPSSPQGNGSISSSSPPSTHQSMV 240
           PLPSFQDEKLGCSEETMDSTVVSQRNMATQMSSEDFTPSSPQGNGSISSSSPPSTHQSMV
Sbjct: 181 PLPSFQDEKLGCSEETMDSTVVSQRNMATQMSSEDFTPSSPQGNGSISSSSPPSTHQSMV 240

Query: 241 GKESDHFSKQEVRDVEVDKGAMMQRSKGHKLRLNEENFPHHGNLDENVVEAGASTLDIAE 300
           GKESDHFSKQEVRDVEVDKGAMMQRSKGHKLRLNEENFPHHGNLDENVVEAGASTLDIAE
Sbjct: 241 GKESDHFSKQEVRDVEVDKGAMMQRSKGHKLRLNEENFPHHGNLDENVVEAGASTLDIAE 300

Query: 301 AAIQVSKLQREEAKIMAWENLQKAKAEAAIRKLEMKLERARSSSMDKILKKLRKAQMKAH 360
           AAIQVSKLQREEAKIMAWENLQKAKAEAAIRKLEMKLERARSSSMDKILKKLRKAQMKAH
Sbjct: 301 AAIQVSKLQREEAKIMAWENLQKAKAEAAIRKLEMKLERARSSSMDKILKKLRKAQMKAH 360

Query: 361 KMRSSPAGDRNQRVRNTNNFLPFHKHVWIGSLKRWFICHAS 402
           KMRSSPAGDRNQRVRNTNNFLPFHKHVWIGSLKRWFICHAS
Sbjct: 361 KMRSSPAGDRNQRVRNTNNFLPFHKHVWIGSLKRWFICHAS 401

[Close]
BLAST of Csa6G490900 vs. TrEMBL
Match: A0A061DGY7_THECC (Remorin family protein, putative isoform 1 OS=Theobroma cacao GN=TCM_000622 PE=4 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 8.9e-89
Identity = 206/422 (48.82%), Postives = 270/422 (63.98%), Query Frame = 1 

Query: 1   MKERSCSSSHNFSAFPSPGVPNYWEINVM-NQRGCSSERIPQPNSNS--RRRNASVAALT 60
           MK+ S S SH  + FPSPG  +Y +  V+  Q+G SSER+P P +++   RR+ S ++LT
Sbjct: 1   MKKGSVSLSH-LATFPSPGASDYRDNGVVVAQKGWSSERVPHPANSTGCSRRHISASSLT 60

Query: 61  PFY-GRTLPSKWEDAERWISSPVMGNGFSRSLQSHLQRRPKSKSGPIGSPGVSTYSNYSP 120
           PFY GRTLPSKWEDAERWI SPV+G G S++    LQRRPKSKSGPI  PG++ YSNYSP
Sbjct: 61  PFYSGRTLPSKWEDAERWICSPVLGYGVSKNANYQLQRRPKSKSGPIVPPGIAFYSNYSP 120

Query: 121 AIPTPENGGFAATK---LGSALSTGVLVADGVSICYGG---TIERGQSYPEYT------- 180
           ++   + GG  + +    GS  STGVL+ADGVS+ YGG   ++  G    E +       
Sbjct: 121 SMQLLDGGGSGSVRNLMAGSPFSTGVLMADGVSVHYGGCRGSVAGGDGDGEQSCMVQNDS 180

Query: 181 -IQRLVSAPRWSNILSESPLPSFQDEKLG--CSEETMDSTVVSQRNMATQMSSEDFTP-S 240
            + R    P WS+++SES LPS QDEKL      ETM S VVS+R+MATQMS E  +  S
Sbjct: 181 NVARSAIIPGWSDLVSESSLPSSQDEKLDEIKDAETMISRVVSRRDMATQMSPEGSSSHS 240

Query: 241 SPQGNGSISSSSPPSTHQSMVGKESDHFSKQEVRDVEVDKGAMMQR-SKGHKLRLNEENF 300
           SP+   S   S PP      + + SDH SK ++R+V++DK A M    K H  R  ++  
Sbjct: 241 SPRERSSFCHSPPPILPLPAM-ENSDHPSKLDIREVQIDKRATMTNWPKRHGSRRIKKGV 300

Query: 301 PHHGNLDENVVEAGASTLDIAEAAIQVSKLQREEAKIMAWENLQKAKAEAAIRKLEMKLE 360
           P   +  +N     A +LD++EAA  +SKL REEAKI AWENLQ+AKAEAAIRKLEMKLE
Sbjct: 301 PDFEDFYQNNTAGSALSLDVSEAATSISKLHREEAKINAWENLQRAKAEAAIRKLEMKLE 360

Query: 361 RARSSSMDKILKKLRKAQMKAHKMRSSPAGDRNQRVRNTNNFLPFHKHVWIGSLKRWFIC 401
           + RS+SMDKIL KLR AQMKA +MRSS     N+++  T+  + F  ++ + S +  F C
Sbjct: 361 KKRSASMDKILSKLRMAQMKAQEMRSSMPAKENEQIPKTSQKVSFF-NIRMSSFRSCFTC 419

[Close]
BLAST of Csa6G490900 vs. TrEMBL
Match: F6H4K2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g00610 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 5.8e-88
Identity = 207/408 (50.74%), Postives = 263/408 (64.46%), Query Frame = 1 

Query: 3   ERSCSSSHNFSAFPSPGVPNYWEINVMNQRGCSSERIPQPNSNSRRRNASVAALTPF-YG 62
           ++S  +SHN  +FPSPG  NY + +    +G SSER+P P+ NS RR    + L PF  G
Sbjct: 2   KKSAVTSHNLGSFPSPGTSNYGDGSGGVPKGWSSERVP-PSVNSGRRYIGGSTLMPFNSG 61

Query: 63  RTLPSKWEDAERWISSPVMGNGFSRSLQSHLQRRPKSKSGPIGSPGVSTYSNYSPAIPTP 122
           R LPSKWEDAERWISSPV G   ++S  +  QRRPKSKSGP+G PGV+   NYSPA+P  
Sbjct: 62  RALPSKWEDAERWISSPVSGYSVNKSSLAQPQRRPKSKSGPLGLPGVAYNPNYSPAMPVF 121

Query: 123 ENGGFAATKLG--SALSTGVLVADGVSICYGGTIERGQSYP---EYTIQRLVSAPRWSNI 182
           + GG     +G  S  STGV+VA+G+S+ YG     GQ +P   E++++R +S P WS+ 
Sbjct: 122 DGGG-VRNFMGPSSPFSTGVMVAEGLSLHYGAG-NGGQPHPVPNEHSMERSISIPGWSDF 181

Query: 183 LSESPLPSFQDEKLGCSE--ETMDSTVVSQRNMATQMSSEDFTPSSPQGNGSISSSSPPS 242
           LSES  P+ QDEKLG S+  ETM S VVS+R++ATQMS +  T SSP+   S     PPS
Sbjct: 182 LSESSSPNSQDEKLGGSKDAETMVSPVVSRRDIATQMSPDSNTHSSPKDRFSF----PPS 241

Query: 243 THQSMVGKESDHFSKQEVRDVEVDKGAMMQR-SKGHKLRLNEENFPHHGNLDENVVEAGA 302
                + ++  H  K EVRDV+VDKG  M R SK H  +      P     D+N  EA A
Sbjct: 242 PLLPTL-EQQTHSVKSEVRDVQVDKGVTMIRWSKKHGAKTTMRAPPDVEETDKNAAEAQA 301

Query: 303 STLDIAEAAIQVSKLQREEAKIMAWENLQKAKAEAAIRKLEMKLERARSSSMDKILKKLR 362
           S+ DIAE +  + KL+REEAKI AWENLQKAKAEAAI+KLEMKLE+ R++SMDKIL KLR
Sbjct: 302 SSWDIAEPSKNILKLKREEAKITAWENLQKAKAEAAIQKLEMKLEKKRAASMDKILSKLR 361

Query: 363 KAQMKAHKMRSS-PAGDRNQRVRNTNNFLPFHKHVWIGSLKRWFICHA 401
            A+MKA +MRSS      NQ  + ++    F K+V  GSL   F CHA
Sbjct: 362 MAEMKAEEMRSSISESQANQDSKTSHKVASFRKNVQKGSLGGCFTCHA 401

[Close]
BLAST of Csa6G490900 vs. TrEMBL
Match: A0A061DHX3_THECC (Remorin family protein, putative isoform 2 OS=Theobroma cacao GN=TCM_000622 PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 2.4e-86
Identity = 200/400 (50.00%), Postives = 259/400 (64.75%), Query Frame = 1 

Query: 1   MKERSCSSSHNFSAFPSPGVPNYWEINVM-NQRGCSSERIPQPNSNS--RRRNASVAALT 60
           MK+ S S SH  + FPSPG  +Y +  V+  Q+G SSER+P P +++   RR+ S ++LT
Sbjct: 1   MKKGSVSLSH-LATFPSPGASDYRDNGVVVAQKGWSSERVPHPANSTGCSRRHISASSLT 60

Query: 61  PFY-GRTLPSKWEDAERWISSPVMGNGFSRSLQSHLQRRPKSKSGPIGSPGVSTYSNYSP 120
           PFY GRTLPSKWEDAERWI SPV+G G S++    LQRRPKSKSGPI  PG++ YSNYSP
Sbjct: 61  PFYSGRTLPSKWEDAERWICSPVLGYGVSKNANYQLQRRPKSKSGPIVPPGIAFYSNYSP 120

Query: 121 AIPTPENGGFAATK---LGSALSTGVLVADGVSICYGG---TIERGQSYPEYT------- 180
           ++   + GG  + +    GS  STGVL+ADGVS+ YGG   ++  G    E +       
Sbjct: 121 SMQLLDGGGSGSVRNLMAGSPFSTGVLMADGVSVHYGGCRGSVAGGDGDGEQSCMVQNDS 180

Query: 181 -IQRLVSAPRWSNILSESPLPSFQDEKLG--CSEETMDSTVVSQRNMATQMSSEDFTP-S 240
            + R    P WS+++SES LPS QDEKL      ETM S VVS+R+MATQMS E  +  S
Sbjct: 181 NVARSAIIPGWSDLVSESSLPSSQDEKLDEIKDAETMISRVVSRRDMATQMSPEGSSSHS 240

Query: 241 SPQGNGSISSSSPPSTHQSMVGKESDHFSKQEVRDVEVDKGAMMQR-SKGHKLRLNEENF 300
           SP+   S   S PP      + + SDH SK ++R+V++DK A M    K H  R  ++  
Sbjct: 241 SPRERSSFCHSPPPILPLPAM-ENSDHPSKLDIREVQIDKRATMTNWPKRHGSRRIKKGV 300

Query: 301 PHHGNLDENVVEAGASTLDIAEAAIQVSKLQREEAKIMAWENLQKAKAEAAIRKLEMKLE 360
           P   +  +N     A +LD++EAA  +SKL REEAKI AWENLQ+AKAEAAIRKLEMKLE
Sbjct: 301 PDFEDFYQNNTAGSALSLDVSEAATSISKLHREEAKINAWENLQRAKAEAAIRKLEMKLE 360

Query: 361 RARSSSMDKILKKLRKAQMKAHKMRSSPAGDRNQRVRNTN 379
           + RS+SMDKIL KLR AQMKA +MRSS     N+++  T+
Sbjct: 361 KKRSASMDKILSKLRMAQMKAQEMRSSMPAKENEQIPKTS 398

[Close]
BLAST of Csa6G490900 vs. TrEMBL
Match: A0A0D2RBI2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G076600 PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 1.5e-83
Identity = 202/421 (47.98%), Postives = 261/421 (62.00%), Query Frame = 1 

Query: 1   MKERSCSSSHNFSAFPSPGVPNYWEIN-VMNQRGCSSERIPQP-NSNSR-RRNASVAALT 60
           MK+ S S SH    FPSPG  +Y +   V++Q+G SSER+ +  NSN   RR+ S ++LT
Sbjct: 1   MKKGSVSLSH-LGTFPSPGGSDYRDNGAVVSQKGWSSERVARSANSNGNSRRHISASSLT 60

Query: 61  PFY-GRTLPSKWEDAERWISSPVMGNGFSRSLQSHLQRRPKSKSGPIGSPGVSTYSNYSP 120
           PFY GRTLPSKWEDAERWI SPV+G G S+++  HLQRRPKSKSGPI  PG++ YSN SP
Sbjct: 61  PFYSGRTLPSKWEDAERWICSPVLGYGVSKNVNYHLQRRPKSKSGPIVPPGIAFYSNCSP 120

Query: 121 AIPTPENGGFAATK---LGSALSTGVLVADGVSICY--------GGTIERGQS---YPEY 180
           ++   + GG         GS  STGVL+ADGVS+ Y         G ++  QS     + 
Sbjct: 121 SMNLLDGGGSGTVTNLMAGSPFSTGVLMADGVSVHYLGCRAAAAAGDVDGDQSCMVQSDS 180

Query: 181 TIQRLVSAPRWSN-ILSESPLPSFQDEKLG--CSEETMDSTVVSQRNMATQMSSEDFTPS 240
            + R    P WS+ ++SES LPS QDEKL      E M   V S+R+MATQMS ++ +  
Sbjct: 181 NVARSAIIPGWSSDLVSESSLPSSQDEKLDEIKDAEMMLCRVASRRDMATQMSPDNSSSH 240

Query: 241 SPQGNGSISSSSPPSTHQSMVGKESDHFSKQEVRDVEVDKGAMM-QRSKGHKLRLNEENF 300
           S     S    SPP          +DH SK ++R+V++DK A +  RSK H  R  ++  
Sbjct: 241 SSTRERSSFGHSPPPILPLPAVDNNDHPSKLDIREVQIDKRATVTNRSKRHGSRRIKKGE 300

Query: 301 PHHGNLDENVVEAGASTLDIAEAAIQVSKLQREEAKIMAWENLQKAKAEAAIRKLEMKLE 360
           P       N     A +LDIAEAA  +SKLQREEAKI AWENLQ+AKAEAAIRKLEMKLE
Sbjct: 301 PDFEGFYRNSAPTSALSLDIAEAATSISKLQREEAKISAWENLQRAKAEAAIRKLEMKLE 360

Query: 361 RARSSSMDKILKKLRKAQMKAHKMRSSPAGDRNQRVRNTNNFLPFHKHVWIGSLKRWFIC 400
           + RS+SMDKIL+KLR AQ+KA +MRSS +G  ++++  T+    F  H+ +  L   F C
Sbjct: 361 KKRSASMDKILRKLRTAQVKAQEMRSSISGKEDEQIPKTSPKFTFF-HIRMSFLSSCFTC 419

[Close]
BLAST of Csa6G490900 vs. TAIR10
Match: AT4G36970.1 (AT4G36970.1 Remorin family protein)

HSP 1 Score: 211.8 bits (538), Expect = 7.5e-55
Identity = 168/403 (41.69%), Postives = 226/403 (56.08%), Query Frame = 1 

Query: 8   SSHNFSAFPSPGVPNYWEINVMNQRGCSSERIPQPNS-------NSRRRN--ASVAALTP 67
           SS++F  F SPG P+Y      + +G SSER+P P+S       N  RR+  +S A  TP
Sbjct: 7   SSNSFGGFLSPGAPSY-----ADNKGWSSERVPHPSSTTSSSAINGGRRHIGSSSALTTP 66

Query: 68  FY-GRTLPSKWEDAERWISSPV----MGNGFSRSLQSHLQRRPKSKSGPIGSPGV----- 127
           FY GR +PSKWEDAERWI SPV     G   + S+ S  QRR KSKSGPI  P +     
Sbjct: 67  FYSGRAIPSKWEDAERWICSPVSTYPQGVCLNSSVSSE-QRRQKSKSGPIVPPTLPHPHP 126

Query: 128 -STYS-----NYSP-----AIPTPENGGFAATKLGSALSTGVLVADGV---SICYGGTIE 187
            S+ S     +YSP     ++  P  G   A   GS  STGVL AD V   S+  GG   
Sbjct: 127 TSSSSATGCYHYSPRMMMRSMDAPPKGLMVA---GSPFSTGVLEADRVFRGSVGGGGCDG 186

Query: 188 RGQSYPEYTIQRLVSAPRWSNILSE--SPLPSFQDEKLGCSEET-MDSTVVSQRNMATQM 247
            G+  P +   R      W +++SE  S L S  D +      T M S VVS+R+MATQM
Sbjct: 187 YGRG-PGHGHSR-----SWVDLMSEETSSLSSKTDTEEKAEMTTAMQSPVVSRRDMATQM 246

Query: 248 SSEDFTPSSPQGNGSISSSSPPSTHQSMVGKESDHFSKQEVRDVEVDKGAMMQRSKGHKL 307
           S E+ +P++       ++ SPP     +V        + EVR+V++DKGA M +    ++
Sbjct: 247 SPEETSPNN-------NNQSPPL----VVSVIEPPPCRGEVREVKMDKGARMIKRPKRRV 306

Query: 308 RLNEENFPHHGNLDENV-VEAGASTLDIAEAAIQVSKLQREEAKIMAWENLQKAKAEAAI 367
             +         +++N    A +S+ DI+E A+ +SKLQREEAKI AWENLQKAKAEAAI
Sbjct: 307 MSSRIIRREQPEVEDNSEASASSSSWDISEPAMTLSKLQREEAKIAAWENLQKAKAEAAI 366

Query: 368 RKLEMKLERARSSSMDKILKKLRKAQMKAHKMRSSPAGDRNQR 374
           RKLE+KLE+ +S+SMDKIL KL+ A++KA +MR S     +++
Sbjct: 367 RKLEVKLEKKKSASMDKILNKLQTAKIKAQEMRRSSVSSEHEQ 383

[Close]
BLAST of Csa6G490900 vs. TAIR10
Match: AT1G45207.2 (AT1G45207.2 Remorin family protein)

HSP 1 Score: 204.1 bits (518), Expect = 1.6e-52
Identity = 158/409 (38.63%), Postives = 215/409 (52.57%), Query Frame = 1 

Query: 3   ERSCSSSHNFSAFPSPGVPNYWEINVMNQRGCSSERIPQPNSNSRRRNASVAALTPFYGR 62
           +R+  S++  S FPSPG P Y       Q+G SSER+P   SN  R   +   L  + GR
Sbjct: 172 KRASVSTNKSSVFPSPGTPTYLH---SMQKGWSSERVPL-RSNGGRSPPNAGFLPLYSGR 231

Query: 63  TLPSKWEDAERWISSPVMGNGFSR-SLQSHLQRRPKSKSGPIGSPGVSTYSNYSPAIPTP 122
           T+PSKWEDAERWI SP+   G +R S  +  +RRPK+KSGP+G PG + YS YSPA+P  
Sbjct: 232 TVPSKWEDAERWIVSPLAKEGAARTSFGASHERRPKAKSGPLGPPGFAYYSLYSPAVPMV 291

Query: 123 ENGGFAATKLGSALSTGVLVADGVSICYGGTIERGQSYPEYTIQRLVSAPRWSNILSESP 182
             G        S  S GVL  + VS   G T        + ++ R VS    S  L+ S 
Sbjct: 292 HGGNMGGLTASSPFSAGVL-PETVS-SRGSTTAAFPQRIDPSMARSVSIHGCSETLASS- 351

Query: 183 LPSFQDEKLGCSEETMDSTVVSQRNMATQMSSEDFTPSSPQGNGSISSSSPPSTHQSMVG 242
             S  D      +   D+  VS+R+MATQMS E     SP+   S S SSP     S + 
Sbjct: 352 --SQDDIHESMKDAATDAQAVSRRDMATQMSPEGSIRFSPERQCSFSPSSPSPLPISEL- 411

Query: 243 KESDHFSKQEVRDVEVDKGAMMQR-SKGHKLRLNEENFPHHGN---LDENVVEAGASTLD 302
             + H ++ EV+D++VD+   + R SK H+         +HGN   + ++V     +  D
Sbjct: 412 -LNAHSNRAEVKDLQVDEKVTVTRWSKKHR-------GLYHGNGSKMRDHVHGKATNHED 471

Query: 303 IAEAAIQVSKLQREEAKIMAWENLQKAKAEAAIRKLE-----MKLERARSSSMDKILKKL 362
           +  A         EEA+I++WENLQKAKAEAAIRKLE     MKLE+ RSSSM+KI++K+
Sbjct: 472 LTCAT--------EEARIISWENLQKAKAEAAIRKLEKYFPQMKLEKKRSSSMEKIMRKV 531

Query: 363 RKAQMKAHKMRSSPAGDRNQRVRN--TNNFLPFHKHVWIGSLKRWFICH 400
           + A+ +A +MR S   +R     +   ++F    K   I SL   F CH
Sbjct: 532 KSAEKRAEEMRRSVLDNRVSTASHGKASSFKRSGKKK-IPSLSGCFTCH 553

[Close]
BLAST of Csa6G490900 vs. TAIR10
Match: AT2G02170.1 (AT2G02170.1 Remorin family protein)

HSP 1 Score: 80.5 bits (197), Expect = 2.6e-15
Identity = 86/356 (24.16%), Postives = 150/356 (42.13%), Query Frame = 1 

Query: 60  YGRTLPSKWEDAERWISSPVMGNGFSRSLQSHLQRRPKSKSGPIGSPGVSTYSNYSPAIP 119
           + +  PSKW+DA++WI+SP                RPK+  G +  PG            
Sbjct: 131 FSKPAPSKWDDAQKWIASPTAN-------------RPKT--GQVQVPGSKK--------- 190

Query: 120 TPENGGFAATKLGSALSTGVLVADGVSICYGGTIER--GQSYPEYTIQRLVSAPRW---- 179
            P  G  ++ K+       V+            +++  G  +  + +    +   +    
Sbjct: 191 GPSFGRQSSMKIVEVAEHRVVEEPDTKRIDVSQVKKDMGNKFGSWEVDSYTTVDSYVKPV 250

Query: 180 ---SNILSESPLP---SFQDEKLGCSEETMDSTV--VSQRNMATQMS-------SEDFTP 239
               N + ES      S  D  +  +     ST   VS R+M T+M+       S + TP
Sbjct: 251 LMVENSIVESATEVNLSRHDSSVATAFAQPPSTARSVSMRDMGTEMTPIASQEPSRNGTP 310

Query: 240 ------------SSPQGNGSISSSSPPSTHQSMVGKESDHFSKQEVRDVEVDKGAM---M 299
                       S P   G  +S+SP S ++ +  KE    +++E+  +    G      
Sbjct: 311 IRATTPIRSPISSEPSSPGRQASASPMS-NKELSEKELQMKTRREIMVLGTQLGKFNIAA 370

Query: 300 QRSKGHKLRLNEENFPHHGNLD--ENVVEAGASTLDIAEAAIQVSKLQREEAKIMAWENL 359
             SK  + +    +     +L   ++V EA A+  + AE A  +++ +REE KI AWEN 
Sbjct: 371 WASKEDEDKDASTSLKTKASLQTSKSVSEARATAWEEAEKAKHMARFRREEMKIQAWENH 430

Query: 360 QKAKAEAAIRKLEMKLERARSSSMDKILKKLRKAQMKAHKMRSSPAGDRNQRVRNT 378
           QKAK+EA ++K E+K+ER +  + D+++KKL   + KA + R++    ++ +   T
Sbjct: 431 QKAKSEAEMKKTEVKVERIKGRAQDRLMKKLATIERKAEEKRAAAEAKKDHQAAKT 461

[Close]
BLAST of Csa6G490900 vs. TAIR10
Match: AT1G30320.1 (AT1G30320.1 Remorin family protein)

HSP 1 Score: 76.6 bits (187), Expect = 3.8e-14
Identity = 81/341 (23.75%), Postives = 135/341 (39.59%), Query Frame = 1 

Query: 62  RTLPSKWEDAERWISSPVMGNGFSRSLQSHLQRRPKSKSGPIGSPGVSTYSNYSPAIPTP 121
           R +PSKW DAE+WI S               Q     K+G           N  P    P
Sbjct: 175 RQMPSKWNDAEKWIMSR--------------QNMVMRKNGQ---------GNRIPVRIVP 234

Query: 122 ENGGFAATKLGSALSTGVLVADGVSICYGGTIERGQSYP-------------EYTIQRLV 181
           +N G+   K              + +C    ++  + +P             EY    L+
Sbjct: 235 DNAGYEHNK------------SRMDLCQSSQVDGFEKFPNVVPSAPHPILTQEYGGDSLI 294

Query: 182 SAPRWSNILSESPLPSFQDEKLGCSEETMDSTVVSQRNMATQM----------------- 241
                SN L++S      D   G          V  R+M T+M                 
Sbjct: 295 DQSTQSNDLADSS----HDHTTGGPAIRS----VCMRDMGTEMTPIPSQEPSRSVTPVGA 354

Query: 242 -----SSEDFTPSSPQGNGSISSSSPPSTHQSMVGKESDHFSKQEVRDVEVDKGAMMQRS 301
                S     PS+P+G     SS   +T + +  +E    +++E+  + V  G M   +
Sbjct: 355 TTPLRSPTSSLPSTPRGGQPEESSMSKNTRRELSEEEEKAKTRREIVALGVQLGKMNIAA 414

Query: 302 KGHKLRLNEENFPHHGNLDENV---VEAGASTLDIAEAAIQVSKLQREEAKIMAWENLQK 361
              K    EEN  ++G+ +E      E  A+  + AE +   ++ +REE +I AWE+ +K
Sbjct: 415 WASKEE--EENKKNNGDAEEAQKIEFEKRATAWEEAEKSKHNARYKREEIRIQAWESQEK 470

Query: 362 AKAEAAIRKLEMKLERARSSSMDKILKKLRKAQMKAHKMRS 365
           AK EA +R++E K+E+ ++ +  KI+KK+  A+ ++ + R+
Sbjct: 475 AKLEAEMRRIEAKVEQMKAEAEAKIMKKIALAKQRSEEKRA 470

[Close]
BLAST of Csa6G490900 vs. TAIR10
Match: AT1G67590.1 (AT1G67590.1 Remorin family protein)

HSP 1 Score: 71.6 bits (174), Expect = 1.2e-12
Identity = 80/338 (23.67%), Postives = 133/338 (39.35%), Query Frame = 1 

Query: 61  GRTLPSKWEDAERWISSPVMGNGFSRSLQSHLQRRPKSKSGPIGSPGVSTYSNYSPAIPT 120
           G+  PSKW+DA++W+S    G GF+R                 G  G    S++      
Sbjct: 41  GKPAPSKWDDAQKWLS----GVGFAR-----------------GGGGGGDKSSHHSRSNK 100

Query: 121 PENGGFAATKLGSALSTGVLVADGVSICYGGTIERGQSYPEYTIQRLVSAPRWSNILSES 180
           P N      +L ++ S                 E    Y EY  + + +           
Sbjct: 101 PRNSNADDLRLIASASQRER-------------EGEDQYVEYDDEEMAAGR--------- 160

Query: 181 PLPSFQDEKLGCSEETM--DSTV--------VSQRNMATQMS-------SEDFTP---SS 240
             P  + + + C E     +S++        V  R+M T+M+       S   TP   ++
Sbjct: 161 --PEVETKNVDCGESVWRKESSINPTAVIRSVCVRDMGTEMTPIGSQEPSRTATPVRATT 220

Query: 241 PQGNGSISSSSPPSTHQSMVGKESDHFSKQEVRDVEVDKGAMMQRSKGHKLRLNEENFPH 300
           P G   ++S    S     VG   +  +  EVR VE +    +      K  ++      
Sbjct: 221 PVGRSPVTSPVRASQRGEAVGVVMETVT--EVRRVESNNSEKVNGFVESKKAMS------ 280

Query: 301 HGNLDENVVEAGASTLDIAEAAIQVSKLQREEAKIMAWENLQKAKAEAAIRKLEMKLERA 360
                   +EA A   D AE A  +++ +REE KI AWEN +K KAE  ++K+E+K ER 
Sbjct: 281 -------AMEARAMAWDEAERAKFMARYKREEVKIQAWENHEKRKAEMEMKKMEVKAERM 318

Query: 361 RSSSMDKILKKLRKAQMKAHKMRSSPAGDRNQRVRNTN 379
           ++ + +K+  KL   +  A + R++     N++   T+
Sbjct: 341 KARAEEKLANKLAATKRIAEERRANAEAKLNEKAVKTS 318

[Close]
BLAST of Csa6G490900 vs. NCBI nr
Match: gi|449448318|ref|XP_004141913.1| (PREDICTED: uncharacterized protein LOC101216077 [Cucumis sativus])

HSP 1 Score: 809.3 bits (2089), Expect = 3.0e-231
Identity = 401/401 (100.00%), Postives = 401/401 (100.00%), Query Frame = 1 

Query: 1   MKERSCSSSHNFSAFPSPGVPNYWEINVMNQRGCSSERIPQPNSNSRRRNASVAALTPFY 60
           MKERSCSSSHNFSAFPSPGVPNYWEINVMNQRGCSSERIPQPNSNSRRRNASVAALTPFY
Sbjct: 1   MKERSCSSSHNFSAFPSPGVPNYWEINVMNQRGCSSERIPQPNSNSRRRNASVAALTPFY 60

Query: 61  GRTLPSKWEDAERWISSPVMGNGFSRSLQSHLQRRPKSKSGPIGSPGVSTYSNYSPAIPT 120
           GRTLPSKWEDAERWISSPVMGNGFSRSLQSHLQRRPKSKSGPIGSPGVSTYSNYSPAIPT
Sbjct: 61  GRTLPSKWEDAERWISSPVMGNGFSRSLQSHLQRRPKSKSGPIGSPGVSTYSNYSPAIPT 120

Query: 121 PENGGFAATKLGSALSTGVLVADGVSICYGGTIERGQSYPEYTIQRLVSAPRWSNILSES 180
           PENGGFAATKLGSALSTGVLVADGVSICYGGTIERGQSYPEYTIQRLVSAPRWSNILSES
Sbjct: 121 PENGGFAATKLGSALSTGVLVADGVSICYGGTIERGQSYPEYTIQRLVSAPRWSNILSES 180

Query: 181 PLPSFQDEKLGCSEETMDSTVVSQRNMATQMSSEDFTPSSPQGNGSISSSSPPSTHQSMV 240
           PLPSFQDEKLGCSEETMDSTVVSQRNMATQMSSEDFTPSSPQGNGSISSSSPPSTHQSMV
Sbjct: 181 PLPSFQDEKLGCSEETMDSTVVSQRNMATQMSSEDFTPSSPQGNGSISSSSPPSTHQSMV 240

Query: 241 GKESDHFSKQEVRDVEVDKGAMMQRSKGHKLRLNEENFPHHGNLDENVVEAGASTLDIAE 300
           GKESDHFSKQEVRDVEVDKGAMMQRSKGHKLRLNEENFPHHGNLDENVVEAGASTLDIAE
Sbjct: 241 GKESDHFSKQEVRDVEVDKGAMMQRSKGHKLRLNEENFPHHGNLDENVVEAGASTLDIAE 300

Query: 301 AAIQVSKLQREEAKIMAWENLQKAKAEAAIRKLEMKLERARSSSMDKILKKLRKAQMKAH 360
           AAIQVSKLQREEAKIMAWENLQKAKAEAAIRKLEMKLERARSSSMDKILKKLRKAQMKAH
Sbjct: 301 AAIQVSKLQREEAKIMAWENLQKAKAEAAIRKLEMKLERARSSSMDKILKKLRKAQMKAH 360

Query: 361 KMRSSPAGDRNQRVRNTNNFLPFHKHVWIGSLKRWFICHAS 402
           KMRSSPAGDRNQRVRNTNNFLPFHKHVWIGSLKRWFICHAS
Sbjct: 361 KMRSSPAGDRNQRVRNTNNFLPFHKHVWIGSLKRWFICHAS 401

[Close]
BLAST of Csa6G490900 vs. NCBI nr
Match: gi|659079480|ref|XP_008440279.1| (PREDICTED: uncharacterized protein LOC103484775 [Cucumis melo])

HSP 1 Score: 775.0 bits (2000), Expect = 6.3e-221
Identity = 385/401 (96.01%), Postives = 389/401 (97.01%), Query Frame = 1 

Query: 1   MKERSCSSSHNFSAFPSPGVPNYWEINVMNQRGCSSERIPQPNSNSRRRNASVAALTPFY 60
           MKERSCSSSHNFSAFPSPGVPNYWEINVMNQRGCSSERIP PNSNSRRRNASVAALTPFY
Sbjct: 1   MKERSCSSSHNFSAFPSPGVPNYWEINVMNQRGCSSERIPHPNSNSRRRNASVAALTPFY 60

Query: 61  GRTLPSKWEDAERWISSPVMGNGFSRSLQSHLQRRPKSKSGPIGSPGVSTYSNYSPAIPT 120
           GRTLPSKWEDAERWISSPVMGNGFSRSLQSHLQRRPKSKSGPIGSPGV  YSNYSPAIPT
Sbjct: 61  GRTLPSKWEDAERWISSPVMGNGFSRSLQSHLQRRPKSKSGPIGSPGVPNYSNYSPAIPT 120

Query: 121 PENGGFAATKLGSALSTGVLVADGVSICYGGTIERGQSYPEYTIQRLVSAPRWSNILSES 180
           PENGGFAA+KLGSALSTGVLVADGVSICYGGTIERGQSYPE+TIQRLVSAPRWSNILSES
Sbjct: 121 PENGGFAASKLGSALSTGVLVADGVSICYGGTIERGQSYPEHTIQRLVSAPRWSNILSES 180

Query: 181 PLPSFQDEKLGCSEETMDSTVVSQRNMATQMSSEDFTPSSPQGNGSISSSSPPSTHQSMV 240
           PLPSFQDE  GCSEETMDS VVSQRNMATQMSSEDFTPSSPQGNGSISSSSPPSTHQSMV
Sbjct: 181 PLPSFQDENFGCSEETMDSAVVSQRNMATQMSSEDFTPSSPQGNGSISSSSPPSTHQSMV 240

Query: 241 GKESDHFSKQEVRDVEVDKGAMMQRSKGHKLRLNEENFPHHGNLDENVVEAGASTLDIAE 300
           GKESDH SKQEVRDVEVDKGAMMQRSKGHKLRLNEENFPH  NLDENVVEAGASTLDIAE
Sbjct: 241 GKESDHCSKQEVRDVEVDKGAMMQRSKGHKLRLNEENFPHLENLDENVVEAGASTLDIAE 300

Query: 301 AAIQVSKLQREEAKIMAWENLQKAKAEAAIRKLEMKLERARSSSMDKILKKLRKAQMKAH 360
           AAIQVSKLQREEAKI AWENLQKAKAEAAIRKLEMKLERARSSSMDKILKKLRKAQMKAH
Sbjct: 301 AAIQVSKLQREEAKITAWENLQKAKAEAAIRKLEMKLERARSSSMDKILKKLRKAQMKAH 360

Query: 361 KMRSSPAGDRNQRVRNTNNFLPFHKHVWIGSLKRWFICHAS 402
           KMRSSPA DRNQRV NTNNFLPFH+H+WIGSLKRWFICHAS
Sbjct: 361 KMRSSPAADRNQRVCNTNNFLPFHRHIWIGSLKRWFICHAS 401

[Close]
BLAST of Csa6G490900 vs. NCBI nr
Match: gi|590704811|ref|XP_007047263.1| (Remorin family protein, putative isoform 1 [Theobroma cacao])

HSP 1 Score: 335.5 bits (859), Expect = 1.3e-88
Identity = 206/422 (48.82%), Postives = 270/422 (63.98%), Query Frame = 1 

Query: 1   MKERSCSSSHNFSAFPSPGVPNYWEINVM-NQRGCSSERIPQPNSNS--RRRNASVAALT 60
           MK+ S S SH  + FPSPG  +Y +  V+  Q+G SSER+P P +++   RR+ S ++LT
Sbjct: 1   MKKGSVSLSH-LATFPSPGASDYRDNGVVVAQKGWSSERVPHPANSTGCSRRHISASSLT 60

Query: 61  PFY-GRTLPSKWEDAERWISSPVMGNGFSRSLQSHLQRRPKSKSGPIGSPGVSTYSNYSP 120
           PFY GRTLPSKWEDAERWI SPV+G G S++    LQRRPKSKSGPI  PG++ YSNYSP
Sbjct: 61  PFYSGRTLPSKWEDAERWICSPVLGYGVSKNANYQLQRRPKSKSGPIVPPGIAFYSNYSP 120

Query: 121 AIPTPENGGFAATK---LGSALSTGVLVADGVSICYGG---TIERGQSYPEYT------- 180
           ++   + GG  + +    GS  STGVL+ADGVS+ YGG   ++  G    E +       
Sbjct: 121 SMQLLDGGGSGSVRNLMAGSPFSTGVLMADGVSVHYGGCRGSVAGGDGDGEQSCMVQNDS 180

Query: 181 -IQRLVSAPRWSNILSESPLPSFQDEKLG--CSEETMDSTVVSQRNMATQMSSEDFTP-S 240
            + R    P WS+++SES LPS QDEKL      ETM S VVS+R+MATQMS E  +  S
Sbjct: 181 NVARSAIIPGWSDLVSESSLPSSQDEKLDEIKDAETMISRVVSRRDMATQMSPEGSSSHS 240

Query: 241 SPQGNGSISSSSPPSTHQSMVGKESDHFSKQEVRDVEVDKGAMMQR-SKGHKLRLNEENF 300
           SP+   S   S PP      + + SDH SK ++R+V++DK A M    K H  R  ++  
Sbjct: 241 SPRERSSFCHSPPPILPLPAM-ENSDHPSKLDIREVQIDKRATMTNWPKRHGSRRIKKGV 300

Query: 301 PHHGNLDENVVEAGASTLDIAEAAIQVSKLQREEAKIMAWENLQKAKAEAAIRKLEMKLE 360
           P   +  +N     A +LD++EAA  +SKL REEAKI AWENLQ+AKAEAAIRKLEMKLE
Sbjct: 301 PDFEDFYQNNTAGSALSLDVSEAATSISKLHREEAKINAWENLQRAKAEAAIRKLEMKLE 360

Query: 361 RARSSSMDKILKKLRKAQMKAHKMRSSPAGDRNQRVRNTNNFLPFHKHVWIGSLKRWFIC 401
           + RS+SMDKIL KLR AQMKA +MRSS     N+++  T+  + F  ++ + S +  F C
Sbjct: 361 KKRSASMDKILSKLRMAQMKAQEMRSSMPAKENEQIPKTSQKVSFF-NIRMSSFRSCFTC 419

[Close]
BLAST of Csa6G490900 vs. NCBI nr
Match: gi|731397241|ref|XP_010652810.1| (PREDICTED: uncharacterized protein LOC100252502 [Vitis vinifera])

HSP 1 Score: 332.8 bits (852), Expect = 8.3e-88
Identity = 207/408 (50.74%), Postives = 263/408 (64.46%), Query Frame = 1 

Query: 3   ERSCSSSHNFSAFPSPGVPNYWEINVMNQRGCSSERIPQPNSNSRRRNASVAALTPF-YG 62
           ++S  +SHN  +FPSPG  NY + +    +G SSER+P P+ NS RR    + L PF  G
Sbjct: 30  KKSAVTSHNLGSFPSPGTSNYGDGSGGVPKGWSSERVP-PSVNSGRRYIGGSTLMPFNSG 89

Query: 63  RTLPSKWEDAERWISSPVMGNGFSRSLQSHLQRRPKSKSGPIGSPGVSTYSNYSPAIPTP 122
           R LPSKWEDAERWISSPV G   ++S  +  QRRPKSKSGP+G PGV+   NYSPA+P  
Sbjct: 90  RALPSKWEDAERWISSPVSGYSVNKSSLAQPQRRPKSKSGPLGLPGVAYNPNYSPAMPVF 149

Query: 123 ENGGFAATKLG--SALSTGVLVADGVSICYGGTIERGQSYP---EYTIQRLVSAPRWSNI 182
           + GG     +G  S  STGV+VA+G+S+ YG     GQ +P   E++++R +S P WS+ 
Sbjct: 150 DGGG-VRNFMGPSSPFSTGVMVAEGLSLHYGAG-NGGQPHPVPNEHSMERSISIPGWSDF 209

Query: 183 LSESPLPSFQDEKLGCSE--ETMDSTVVSQRNMATQMSSEDFTPSSPQGNGSISSSSPPS 242
           LSES  P+ QDEKLG S+  ETM S VVS+R++ATQMS +  T SSP+   S     PPS
Sbjct: 210 LSESSSPNSQDEKLGGSKDAETMVSPVVSRRDIATQMSPDSNTHSSPKDRFSF----PPS 269

Query: 243 THQSMVGKESDHFSKQEVRDVEVDKGAMMQR-SKGHKLRLNEENFPHHGNLDENVVEAGA 302
                + ++  H  K EVRDV+VDKG  M R SK H  +      P     D+N  EA A
Sbjct: 270 PLLPTL-EQQTHSVKSEVRDVQVDKGVTMIRWSKKHGAKTTMRAPPDVEETDKNAAEAQA 329

Query: 303 STLDIAEAAIQVSKLQREEAKIMAWENLQKAKAEAAIRKLEMKLERARSSSMDKILKKLR 362
           S+ DIAE +  + KL+REEAKI AWENLQKAKAEAAI+KLEMKLE+ R++SMDKIL KLR
Sbjct: 330 SSWDIAEPSKNILKLKREEAKITAWENLQKAKAEAAIQKLEMKLEKKRAASMDKILSKLR 389

Query: 363 KAQMKAHKMRSS-PAGDRNQRVRNTNNFLPFHKHVWIGSLKRWFICHA 401
            A+MKA +MRSS      NQ  + ++    F K+V  GSL   F CHA
Sbjct: 390 MAEMKAEEMRSSISESQANQDSKTSHKVASFRKNVQKGSLGGCFTCHA 429

[Close]
BLAST of Csa6G490900 vs. NCBI nr
Match: gi|720024081|ref|XP_010263530.1| (PREDICTED: uncharacterized protein LOC104601770 [Nelumbo nucifera])

HSP 1 Score: 332.4 bits (851), Expect = 1.1e-87
Identity = 203/410 (49.51%), Postives = 254/410 (61.95%), Query Frame = 1 

Query: 3   ERSCSSSHNFSAFPSPGVPNYWEINVMNQRGCSSERIPQPNSNSRRRNASVAALTPFYGR 62
           ++S  SS     FPSPG PNY   +V  Q+G SSER+P P  N  RR AS A L    GR
Sbjct: 2   KKSSGSSRRSGTFPSPGTPNYRHGSVGVQKGWSSERVPLP-VNGSRRYASAALLPLSNGR 61

Query: 63  TLPSKWEDAERWISSPVMGNGFSRSLQSHLQRRPKSKSGPIGSPGVSTYSNYSPAIPTPE 122
           TLPSKWEDAE+WI SPV G+G SRS   H QRRPKSKSGP+G+PG++ YS YSPA+P  +
Sbjct: 62  TLPSKWEDAEKWIFSPVSGDGASRSSMPHPQRRPKSKSGPLGTPGMAFYSAYSPAMPMYD 121

Query: 123 NGGFAATKLGSALSTGVLVADGVSICYGGTIERG--------QSYPEYTIQRLVSAPRWS 182
            G F +   GS  STGVL+AD  S   GG   R          +  E  I R  S   WS
Sbjct: 122 GGNFGSFMAGSPFSTGVLIADCPSGRSGGGGRRDGASGRGSLHAQTEPCIARSASVHGWS 181

Query: 183 NILSESPLPSFQDEKLGCSEE--TMDSTVVSQRNMATQMSSEDFTPSSPQGNGSISSSSP 242
           ++L++S     QDEKL  +++  TM S  VS+R++ATQMS E  T SSP G  S S S P
Sbjct: 182 DVLAQSSTTGLQDEKLDGTKDAATMISRSVSRRDVATQMSPESSTQSSPNGRPSFSPSPP 241

Query: 243 PSTHQSMVGKESDHFSKQEVRDVEVDKGAMMQR-SKGHKLRLNEENFPHHGNLDENVVEA 302
           P     +V  +  H  K E+RDV+VD+   + R SK H  R+ E+   +  + ++   E 
Sbjct: 242 PLL--PIVELQGRHSFKSEIRDVQVDERVTVTRWSKKHGARVPEKGSANVEDWNKKATET 301

Query: 303 GASTLDIAEAAIQVSKLQREEAKIMAWENLQKAKAEAAIRKLEMKLERARSSSMDKILKK 362
             S  ++AE A  +SK +REEAKI AWENLQKAKAEAAIRKLEMKLE+ RSSSMDKI+ K
Sbjct: 302 QPSAWEVAETAKCLSKCRREEAKITAWENLQKAKAEAAIRKLEMKLEKKRSSSMDKIMSK 361

Query: 363 LRKAQMKAHKMRSSPAGDR-NQRVRNTNNFLPFHKHVWIGSLKRWFICHA 401
           LR AQ KAH+MRSS A ++ +Q  R ++  + F K   IGSL   F CHA
Sbjct: 362 LRLAQKKAHEMRSSVAANQAHQVARTSSKVVSFRKAGQIGSLSGCFTCHA 408

The following BLAST results are available for this feature:
BLAST of Csa6G490900 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KLC7_CUCSA2.1e-231100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G490900 PE=4 SV=1[more]
A0A061DGY7_THECC8.9e-8948.82Remorin family protein, putative isoform 1 OS=Theobroma cacao GN=TCM_000622 PE=4... [more]
F6H4K2_VITVI5.8e-8850.74Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g00610 PE=4 SV=... [more]
A0A061DHX3_THECC2.4e-8650.00Remorin family protein, putative isoform 2 OS=Theobroma cacao GN=TCM_000622 PE=4... [more]
A0A0D2RBI2_GOSRA1.5e-8347.98Uncharacterized protein OS=Gossypium raimondii GN=B456_008G076600 PE=4 SV=1[more]
BLAST of Csa6G490900 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G36970.17.5e-5541.69 Remorin family protein[more]
AT1G45207.21.6e-5238.63 Remorin family protein[more]
AT2G02170.12.6e-1524.16 Remorin family protein[more]
AT1G30320.13.8e-1423.75 Remorin family protein[more]
AT1G67590.11.2e-1223.67 Remorin family protein[more]
BLAST of Csa6G490900 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449448318|ref|XP_004141913.1|3.0e-231100.00PREDICTED: uncharacterized protein LOC101216077 [Cucumis sativus][more]
gi|659079480|ref|XP_008440279.1|6.3e-22196.01PREDICTED: uncharacterized protein LOC103484775 [Cucumis melo][more]
gi|590704811|ref|XP_007047263.1|1.3e-8848.82Remorin family protein, putative isoform 1 [Theobroma cacao][more]
gi|731397241|ref|XP_010652810.1|8.3e-8850.74PREDICTED: uncharacterized protein LOC100252502 [Vitis vinifera][more]
gi|720024081|ref|XP_010263530.1|1.1e-8749.51PREDICTED: uncharacterized protein LOC104601770 [Nelumbo nucifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005516Remorin_C
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0009507 chloroplast
cellular_component GO:0005886 plasma membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU085518cucumber EST collection version 3.0transcribed_cluster
CU085801cucumber EST collection version 3.0transcribed_cluster
CU087400cucumber EST collection version 3.0transcribed_cluster
CU090784cucumber EST collection version 3.0transcribed_cluster
CU098184cucumber EST collection version 3.0transcribed_cluster
CU110856cucumber EST collection version 3.0transcribed_cluster
CU114828cucumber EST collection version 3.0transcribed_cluster
CU131304cucumber EST collection version 3.0transcribed_cluster
CU138716cucumber EST collection version 3.0transcribed_cluster
CU172354cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G490900.1Csa6G490900.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU085801CU085801transcribed_cluster
CU098184CU098184transcribed_cluster
CU172354CU172354transcribed_cluster
CU138716CU138716transcribed_cluster
CU110856CU110856transcribed_cluster
CU090784CU090784transcribed_cluster
CU087400CU087400transcribed_cluster
CU131304CU131304transcribed_cluster
CU114828CU114828transcribed_cluster
CU085518CU085518transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005516Remorin, C-terminalPFAMPF03763Remorin_Ccoord: 289..376
score: 4.2
NoneNo IPR availableunknownCoilCoilcoord: 323..343
scor
NoneNo IPR availablePANTHERPTHR31471FAMILY NOT NAMEDcoord: 1..400
score: 1.7E
NoneNo IPR availablePANTHERPTHR31471:SF2SUBFAMILY NOT NAMEDcoord: 1..400
score: 1.7E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa6G490900Cla000710Watermelon (97103) v1cuwmB503
Csa6G490900Cla022581Watermelon (97103) v1cuwmB461
Csa6G490900Cla020667Watermelon (97103) v1cuwmB495
Csa6G490900MELO3C016759Melon (DHL92) v3.5.1cumeB501
Csa6G490900MELO3C007561Melon (DHL92) v3.5.1cumeB503
Csa6G490900MELO3C010849Melon (DHL92) v3.5.1cumeB470
Csa6G490900ClCG08G016010Watermelon (Charleston Gray)cuwcgB503
Csa6G490900ClCG01G016840Watermelon (Charleston Gray)cuwcgB432
Csa6G490900ClCG05G019940Watermelon (Charleston Gray)cuwcgB471
Csa6G490900Lsi04G015580Bottle gourd (USVL1VR-Ls)culsiB454
Csa6G490900Lsi08G014790Bottle gourd (USVL1VR-Ls)culsiB474
Csa6G490900Lsi01G009750Bottle gourd (USVL1VR-Ls)culsiB434
Csa6G490900MELO3C010849.2Melon (DHL92) v3.6.1cumedB452
Csa6G490900MELO3C007561.2Melon (DHL92) v3.6.1cumedB483
Csa6G490900MELO3C016759.2Melon (DHL92) v3.6.1cumedB481
Csa6G490900Cla97C01G015940Watermelon (97103) v2cuwmbB412
Csa6G490900Cla97C05G101580Watermelon (97103) v2cuwmbB462
Csa6G490900Cla97C08G159630Watermelon (97103) v2cuwmbB494
Csa6G490900Bhi03G001436Wax gourdcuwgoB630
Csa6G490900Bhi04G000331Wax gourdcuwgoB577
Csa6G490900Bhi09G002725Wax gourdcuwgoB646
Csa6G490900CSPI02G19020Wild cucumber (PI 183967)cpicuB090
Csa6G490900CSPI06G28140Wild cucumber (PI 183967)cpicuB313
Csa6G490900CSPI04G24140Wild cucumber (PI 183967)cpicuB199
Csa6G490900Cucsa.396060Cucumber (Gy14) v1cgycuB552
Csa6G490900Cucsa.102440Cucumber (Gy14) v1cgycuB121
Csa6G490900Cucsa.352240Cucumber (Gy14) v1cgycuB497
Csa6G490900CmaCh03G009770Cucurbita maxima (Rimu)cmacuB681
Csa6G490900CmaCh09G002330Cucurbita maxima (Rimu)cmacuB033
Csa6G490900CmaCh07G007040Cucurbita maxima (Rimu)cmacuB877
Csa6G490900CmaCh05G001800Cucurbita maxima (Rimu)cmacuB809
Csa6G490900CmoCh09G002260Cucurbita moschata (Rifu)cmocuB023
Csa6G490900CmoCh03G009930Cucurbita moschata (Rifu)cmocuB670
Csa6G490900CmoCh05G001780Cucurbita moschata (Rifu)cmocuB801
Csa6G490900CmoCh07G007180Cucurbita moschata (Rifu)cmocuB865
Csa6G490900CmoCh12G005000Cucurbita moschata (Rifu)cmocuB176
Csa6G490900Cp4.1LG10g02610Cucurbita pepo (Zucchini)cpecuB085
Csa6G490900Cp4.1LG19g11260Cucurbita pepo (Zucchini)cpecuB503
Csa6G490900CsGy6G027570Cucumber (Gy14) v2cgybcuB281
Csa6G490900CsGy4G022410Cucumber (Gy14) v2cgybcuB186
Csa6G490900CsGy2G018900Cucumber (Gy14) v2cgybcuB082
Csa6G490900Carg11852Silver-seed gourdcarcuB0205
Csa6G490900Carg05217Silver-seed gourdcarcuB0826
Csa6G490900Carg00839Silver-seed gourdcarcuB0441
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Csa6G490900Csa2G357200Cucumber (Chinese Long) v2cucuB072
Csa6G490900Csa4G639850Cucumber (Chinese Long) v2cucuB143
The following block(s) are covering this gene:
GeneOrganismBlock
Csa6G490900Cucumber (Chinese Long) v2cucuB069
Csa6G490900Cucumber (Gy14) v1cgycuB514
Csa6G490900Cucurbita maxima (Rimu)cmacuB144
Csa6G490900Cucurbita moschata (Rifu)cmocuB475
Csa6G490900Melon (DHL92) v3.5.1cumeB438
Csa6G490900Watermelon (Charleston Gray)cuwcgB459
Csa6G490900Watermelon (97103) v1cuwmB500
Csa6G490900Watermelon (97103) v1cuwmB532
Csa6G490900Cucurbita pepo (Zucchini)cpecuB256
Csa6G490900Cucurbita pepo (Zucchini)cpecuB583
Csa6G490900Cucurbita pepo (Zucchini)cpecuB686
Csa6G490900Bottle gourd (USVL1VR-Ls)culsiB420
Csa6G490900Melon (DHL92) v3.6.1cumedB415
Csa6G490900Silver-seed gourdcarcuB0409
Csa6G490900Watermelon (97103) v2cuwmbB448
Csa6G490900Wax gourdcuwgoB603