Csa6G487790 (gene) Cucumber (Chinese Long) v2

NameCsa6G487790
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 22990907 .. 22991434 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGAGGAAGGGCGTGCCTGTTGGATTACTGAGAAAGCTTTGCAGAGAGACCCACATGGTGATACAATCATCAAAAAGTGAGATGAAGGCAAATCGGTATTGAGATAAAGTAATAATCCATACCCACCTCTTCATTTCACTTTTTCTTCTTTTTCAATTCTTTTTTCTTTTGTGGGTCTTCTGATTTTTTCTTTAATTCACAAAGTTAAAGCATCTCTTCGCTAATTATTTCACTTACAAGGCTTTGTTCGTTGGTTCCCTTGATGCTCGACACTGGAGCTCTCTTTTTAATCATATTACGCTATCTTGGTTTCGAATAAGAGGTGGGTTTTTTCTCAGAATTCTCAGCTCTTCACTTTGACACTGATGTTATTATAGTATTACGACAGATGGTGATGATGTTTTGGGTCTTGGGGAGCTTTCAGATTCTCTACTCTGTAAGTTAGCGAATGAAATTCAGTGCGTTTGTGTTCGAGTTTTTAGGTTTTTTTCATATGAGGTTGCGCATCTCTTGGTGATGGCTTGA

mRNA sequence

ATGATGAGGAAGGGCGTGCCTGTTGGATTACTGAGAAAGCTTTGCAGAGAGACCCACATGGCTTTGTTCGTTGGTTCCCTTGATGCTCGACACTGGAGCTCTCTTTTTAATCATATTACGCTATCTTGGTTTCGAATAAGAGATGGTGATGATGTTTTGGGTCTTGGGGAGCTTTCAGATTCTCTACTCTGTAAGTTAGCGAATGAAATTCAGTGCGTTTGTGTTCGAGTTTTTAGGTTTTTTTCATATGAGGTTGCGCATCTCTTGGTGATGGCTTGA

Coding sequence (CDS)

ATGATGAGGAAGGGCGTGCCTGTTGGATTACTGAGAAAGCTTTGCAGAGAGACCCACATGGCTTTGTTCGTTGGTTCCCTTGATGCTCGACACTGGAGCTCTCTTTTTAATCATATTACGCTATCTTGGTTTCGAATAAGAGATGGTGATGATGTTTTGGGTCTTGGGGAGCTTTCAGATTCTCTACTCTGTAAGTTAGCGAATGAAATTCAGTGCGTTTGTGTTCGAGTTTTTAGGTTTTTTTCATATGAGGTTGCGCATCTCTTGGTGATGGCTTGA

Protein sequence

MMRKGVPVGLLRKLCRETHMALFVGSLDARHWSSLFNHITLSWFRIRDGDDVLGLGELSDSLLCKLANEIQCVCVRVFRFFSYEVAHLLVMA*
BLAST of Csa6G487790 vs. TrEMBL
Match: A0A0A0KG12_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G487790 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 6.3e-46
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 1

Query: 1  MMRKGVPVGLLRKLCRETHMALFVGSLDARHWSSLFNHITLSWFRIRDGDDVLGLGELSD 60
          MMRKGVPVGLLRKLCRETHMALFVGSLDARHWSSLFNHITLSWFRIRDGDDVLGLGELSD
Sbjct: 1  MMRKGVPVGLLRKLCRETHMALFVGSLDARHWSSLFNHITLSWFRIRDGDDVLGLGELSD 60

Query: 61 SLLCKLANEIQCVCVRVFRFFSYEVAHLLVMA 93
          SLLCKLANEIQCVCVRVFRFFSYEVAHLLVMA
Sbjct: 61 SLLCKLANEIQCVCVRVFRFFSYEVAHLLVMA 92

BLAST of Csa6G487790 vs. NCBI nr
Match: gi|700193254|gb|KGN48458.1| (hypothetical protein Csa_6G487790 [Cucumis sativus])

HSP 1 Score: 191.0 bits (484), Expect = 9.0e-46
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 1

Query: 1  MMRKGVPVGLLRKLCRETHMALFVGSLDARHWSSLFNHITLSWFRIRDGDDVLGLGELSD 60
          MMRKGVPVGLLRKLCRETHMALFVGSLDARHWSSLFNHITLSWFRIRDGDDVLGLGELSD
Sbjct: 1  MMRKGVPVGLLRKLCRETHMALFVGSLDARHWSSLFNHITLSWFRIRDGDDVLGLGELSD 60

Query: 61 SLLCKLANEIQCVCVRVFRFFSYEVAHLLVMA 93
          SLLCKLANEIQCVCVRVFRFFSYEVAHLLVMA
Sbjct: 61 SLLCKLANEIQCVCVRVFRFFSYEVAHLLVMA 92

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KG12_CUCSA6.3e-46100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G487790 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700193254|gb|KGN48458.1|9.0e-46100.00hypothetical protein Csa_6G487790 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU117822cucumber EST collection version 3.0transcribed_cluster
CU174092cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G487790.1Csa6G487790.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU117822CU117822transcribed_cluster
CU174092CU174092transcribed_cluster


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa6G487790Bottle gourd (USVL1VR-Ls)culsiB434
Csa6G487790Cucumber (Gy14) v2cgybcuB083
Csa6G487790Cucumber (Gy14) v2cgybcuB281
Csa6G487790Melon (DHL92) v3.6.1cumedB454
Csa6G487790Melon (DHL92) v3.6.1cumedB483
Csa6G487790Silver-seed gourdcarcuB0205
Csa6G487790Silver-seed gourdcarcuB0441
Csa6G487790Silver-seed gourdcarcuB0826
Csa6G487790Watermelon (97103) v2cuwmbB412
Csa6G487790Watermelon (97103) v2cuwmbB441
Csa6G487790Watermelon (97103) v2cuwmbB495
Csa6G487790Wax gourdcuwgoB585
Csa6G487790Wax gourdcuwgoB630
Csa6G487790Cucumber (Chinese Long) v2cucuB075
Csa6G487790Cucumber (Gy14) v1cgycuB121
Csa6G487790Cucumber (Gy14) v1cgycuB329
Csa6G487790Cucurbita maxima (Rimu)cmacuB681
Csa6G487790Cucurbita maxima (Rimu)cmacuB809
Csa6G487790Cucurbita maxima (Rimu)cmacuB877
Csa6G487790Cucurbita moschata (Rifu)cmocuB550
Csa6G487790Cucurbita moschata (Rifu)cmocuB670
Csa6G487790Cucurbita moschata (Rifu)cmocuB802
Csa6G487790Cucurbita moschata (Rifu)cmocuB865
Csa6G487790Melon (DHL92) v3.5.1cumeB472
Csa6G487790Melon (DHL92) v3.5.1cumeB503
Csa6G487790Watermelon (Charleston Gray)cuwcgB432
Csa6G487790Watermelon (Charleston Gray)cuwcgB451
Csa6G487790Watermelon (Charleston Gray)cuwcgB505
Csa6G487790Watermelon (97103) v1cuwmB464
Csa6G487790Watermelon (97103) v1cuwmB500
Csa6G487790Watermelon (97103) v1cuwmB525
Csa6G487790Cucurbita pepo (Zucchini)cpecuB085
Csa6G487790Cucurbita pepo (Zucchini)cpecuB503
Csa6G487790Cucurbita pepo (Zucchini)cpecuB840