Csa6G486170 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G486170
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 22512087 .. 22512313 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATGGGCAGCACAGAAGCAAGTCAAGCAGACGAAAGCAGACGGCAAAGTAGACACACGGCGGTCAAAATACGCAACCAAACTCTTCGGAAAAGTACTTTTTCAAAAATCACTCTCTTTTACTCAATTATTATTATTTTCTTTCGATCTTTATAAAAGCCCCATTTCTCTTCTTCTATCCTTCAATTCAATCTCACCATTTCTTCTTCTTCTTCTTCTTTCTGA

mRNA sequence

ATGGCATGGGCAGCACAGAAGCAAGTCAAGCAGACGAAAGCAGACGGCAAAGTAGACACACGGCGGTCAAAATACGCAACCAAACTCTTCGGAAAACCCCATTTCTCTTCTTCTATCCTTCAATTCAATCTCACCATTTCTTCTTCTTCTTCTTCTTTCTGA

Coding sequence (CDS)

ATGGCATGGGCAGCACAGAAGCAAGTCAAGCAGACGAAAGCAGACGGCAAAGTAGACACACGGCGGTCAAAATACGCAACCAAACTCTTCGGAAAACCCCATTTCTCTTCTTCTATCCTTCAATTCAATCTCACCATTTCTTCTTCTTCTTCTTCTTTCTGA

Protein sequence

MAWAAQKQVKQTKADGKVDTRRSKYATKLFGKPHFSSSILQFNLTISSSSSSF*
Homology
[Close]
BLAST of Csa6G486170 vs. TrEMBL
Match: A0A0A0KFT4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G486170 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 9.1e-21
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 1 

Query: 1  MAWAAQKQVKQTKADGKVDTRRSKYATKLFGKPHFSSSILQFNLTISSSSSSF 54
          MAWAAQKQVKQTKADGKVDTRRSKYATKLFGKPHFSSSILQFNLTISSSSSSF
Sbjct: 1  MAWAAQKQVKQTKADGKVDTRRSKYATKLFGKPHFSSSILQFNLTISSSSSSF 53

[Close]
BLAST of Csa6G486170 vs. NCBI nr
Match: gi|700193189|gb|KGN48393.1| (hypothetical protein Csa_6G486170 [Cucumis sativus])

HSP 1 Score: 106.7 bits (265), Expect = 1.3e-20
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 1 

Query: 1  MAWAAQKQVKQTKADGKVDTRRSKYATKLFGKPHFSSSILQFNLTISSSSSSF 54
          MAWAAQKQVKQTKADGKVDTRRSKYATKLFGKPHFSSSILQFNLTISSSSSSF
Sbjct: 1  MAWAAQKQVKQTKADGKVDTRRSKYATKLFGKPHFSSSILQFNLTISSSSSSF 53

The following BLAST results are available for this feature:
BLAST of Csa6G486170 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KFT4_CUCSA9.1e-21100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G486170 PE=4 SV=1[more]
BLAST of Csa6G486170 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700193189|gb|KGN48393.1|1.3e-20100.00hypothetical protein Csa_6G486170 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G486170.1Csa6G486170.1mRNA