Csa6G484590 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G484590
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 22423024 .. 22423425 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGAAGGAAGGAATGAAGAAGAAGCCAACCCTCCAAAGAAGGTCGGTCTGGGTGAGAGAAGAGTGAGTGTTGTCGACCTAGGTGAGTTGAAAGACGAGAATAAGAGGAAGAGGAAAGAAGAGAAATGGGGGTTTATAAACAGAGAGAGAGAGGGAGGAGGGAAAGAAGGGAAATGCAAATGCAAATGCAAATGCGAAGGAAATGAGAAATTTGGAGAAGGAATCATTTCGACCACGAGAAAAGATAGGGTGACCTGGCTGACAGCCTTTCCCAGCCCCATTCTTCCTTTCTTCTTCCTTTCTTTTTCCTCTTTTTTCATTTCTTTTATCTCCACCGTTCGATCATTTATTTTCGGCTTCGGCTCCGCTTCGGCTTCCGCTTCCGCTTCCGATTCCTAA

mRNA sequence

ATGAAGGAAGGAAGGAATGAAGAAGAAGCCAACCCTCCAAAGAAGGTCGGTCTGGGTGAGAGAAGAGTGAGTGTTGTCGACCTAGGTGAGTTGAAAGACGAGAATAAGAGGAAGAGGAAAGAAGAGAAATGGGGGTTTATAAACAGAGAGAGAGAGGGAGGAGGGAAAGAAGGGAAATGCAAATGCAAATGCAAATGCGAAGGAAATGAGAAATTTGGAGAAGGAATCATTTCGACCACGAGAAAAGATAGGGTGACCTGGCTGACAGCCTTTCCCAGCCCCATTCTTCCTTTCTTCTTCCTTTCTTTTTCCTCTTTTTTCATTTCTTTTATCTCCACCGTTCGATCATTTATTTTCGGCTTCGGCTCCGCTTCGGCTTCCGCTTCCGCTTCCGATTCCTAA

Coding sequence (CDS)

ATGAAGGAAGGAAGGAATGAAGAAGAAGCCAACCCTCCAAAGAAGGTCGGTCTGGGTGAGAGAAGAGTGAGTGTTGTCGACCTAGGTGAGTTGAAAGACGAGAATAAGAGGAAGAGGAAAGAAGAGAAATGGGGGTTTATAAACAGAGAGAGAGAGGGAGGAGGGAAAGAAGGGAAATGCAAATGCAAATGCAAATGCGAAGGAAATGAGAAATTTGGAGAAGGAATCATTTCGACCACGAGAAAAGATAGGGTGACCTGGCTGACAGCCTTTCCCAGCCCCATTCTTCCTTTCTTCTTCCTTTCTTTTTCCTCTTTTTTCATTTCTTTTATCTCCACCGTTCGATCATTTATTTTCGGCTTCGGCTCCGCTTCGGCTTCCGCTTCCGCTTCCGATTCCTAA

Protein sequence

MKEGRNEEEANPPKKVGLGERRVSVVDLGELKDENKRKRKEEKWGFINREREGGGKEGKCKCKCKCEGNEKFGEGIISTTRKDRVTWLTAFPSPILPFFFLSFSSFFISFISTVRSFIFGFGSASASASASDS*
Homology
[Close]
BLAST of Csa6G484590 vs. TrEMBL
Match: A0A0A0KKV0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G484590 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 1.1e-70
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 1 

Query: 1   MKEGRNEEEANPPKKVGLGERRVSVVDLGELKDENKRKRKEEKWGFINREREGGGKEGKC 60
           MKEGRNEEEANPPKKVGLGERRVSVVDLGELKDENKRKRKEEKWGFINREREGGGKEGKC
Sbjct: 1   MKEGRNEEEANPPKKVGLGERRVSVVDLGELKDENKRKRKEEKWGFINREREGGGKEGKC 60

Query: 61  KCKCKCEGNEKFGEGIISTTRKDRVTWLTAFPSPILPFFFLSFSSFFISFISTVRSFIFG 120
           KCKCKCEGNEKFGEGIISTTRKDRVTWLTAFPSPILPFFFLSFSSFFISFISTVRSFIFG
Sbjct: 61  KCKCKCEGNEKFGEGIISTTRKDRVTWLTAFPSPILPFFFLSFSSFFISFISTVRSFIFG 120

Query: 121 FGSASASASASDS 134
           FGSASASASASDS
Sbjct: 121 FGSASASASASDS 133

[Close]
BLAST of Csa6G484590 vs. NCBI nr
Match: gi|700193177|gb|KGN48381.1| (hypothetical protein Csa_6G484590 [Cucumis sativus])

HSP 1 Score: 273.9 bits (699), Expect = 1.5e-70
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 1 

Query: 1   MKEGRNEEEANPPKKVGLGERRVSVVDLGELKDENKRKRKEEKWGFINREREGGGKEGKC 60
           MKEGRNEEEANPPKKVGLGERRVSVVDLGELKDENKRKRKEEKWGFINREREGGGKEGKC
Sbjct: 1   MKEGRNEEEANPPKKVGLGERRVSVVDLGELKDENKRKRKEEKWGFINREREGGGKEGKC 60

Query: 61  KCKCKCEGNEKFGEGIISTTRKDRVTWLTAFPSPILPFFFLSFSSFFISFISTVRSFIFG 120
           KCKCKCEGNEKFGEGIISTTRKDRVTWLTAFPSPILPFFFLSFSSFFISFISTVRSFIFG
Sbjct: 61  KCKCKCEGNEKFGEGIISTTRKDRVTWLTAFPSPILPFFFLSFSSFFISFISTVRSFIFG 120

Query: 121 FGSASASASASDS 134
           FGSASASASASDS
Sbjct: 121 FGSASASASASDS 133

The following BLAST results are available for this feature:
BLAST of Csa6G484590 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KKV0_CUCSA1.1e-70100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G484590 PE=4 SV=1[more]
BLAST of Csa6G484590 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700193177|gb|KGN48381.1|1.5e-70100.00hypothetical protein Csa_6G484590 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU108319cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G484590.1Csa6G484590.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU108319CU108319transcribed_cluster