Csa6G471010 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G471010
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 21877765 .. 21878064 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGATGATGAATTTGTGGAAGAAGTTGCAAAGGTTTGCAGTTGAAGTACGAAGGTGTGGTGAGAGTGGTAAGTTGCAAAGGTTGTGGTTGCTCTCCTTTTGGATAATTTGGTTGGAAAGAAATAACCAAAATTTCAACGTTAAACATGTCAGCAATGCAGGATTATGGGAAAACATATGTAACCAGTCAGTCCTCCCCGCTCCGTGGGCTCTTAGGCGGCTAGCTCAAGGGGAACTGTTGGCAAAGAATCCATGCTGGGAACAATCTCTCTCTGCTTTCATCTTCTCGCTTCCCTAG

mRNA sequence

ATGTGGATGATGAATTTGTGGAAGAAGTTGCAAAGGTTTGCAGTTGAAGTACGAAGGTGTGGTGAGAGTGGATTATGGGAAAACATATGTAACCAGTCAGTCCTCCCCGCTCCGTGGGCTCTTAGGCGGCTAGCTCAAGGGGAACTGTTGGCAAAGAATCCATGCTGGGAACAATCTCTCTCTGCTTTCATCTTCTCGCTTCCCTAG

Coding sequence (CDS)

ATGTGGATGATGAATTTGTGGAAGAAGTTGCAAAGGTTTGCAGTTGAAGTACGAAGGTGTGGTGAGAGTGGATTATGGGAAAACATATGTAACCAGTCAGTCCTCCCCGCTCCGTGGGCTCTTAGGCGGCTAGCTCAAGGGGAACTGTTGGCAAAGAATCCATGCTGGGAACAATCTCTCTCTGCTTTCATCTTCTCGCTTCCCTAG

Protein sequence

MWMMNLWKKLQRFAVEVRRCGESGLWENICNQSVLPAPWALRRLAQGELLAKNPCWEQSLSAFIFSLP*
Homology
[Close]
BLAST of Csa6G471010 vs. TrEMBL
Match: A0A0A0KFH4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G471010 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 2.7e-33
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 1 

Query: 1  MWMMNLWKKLQRFAVEVRRCGESGLWENICNQSVLPAPWALRRLAQGELLAKNPCWEQSL 60
          MWMMNLWKKLQRFAVEVRRCGESGLWENICNQSVLPAPWALRRLAQGELLAKNPCWEQSL
Sbjct: 1  MWMMNLWKKLQRFAVEVRRCGESGLWENICNQSVLPAPWALRRLAQGELLAKNPCWEQSL 60

Query: 61 SAFIFSLP 69
          SAFIFSLP
Sbjct: 61 SAFIFSLP 68

[Close]
BLAST of Csa6G471010 vs. NCBI nr
Match: gi|700193104|gb|KGN48308.1| (hypothetical protein Csa_6G471010 [Cucumis sativus])

HSP 1 Score: 148.7 bits (374), Expect = 3.8e-33
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 1 

Query: 1  MWMMNLWKKLQRFAVEVRRCGESGLWENICNQSVLPAPWALRRLAQGELLAKNPCWEQSL 60
          MWMMNLWKKLQRFAVEVRRCGESGLWENICNQSVLPAPWALRRLAQGELLAKNPCWEQSL
Sbjct: 1  MWMMNLWKKLQRFAVEVRRCGESGLWENICNQSVLPAPWALRRLAQGELLAKNPCWEQSL 60

Query: 61 SAFIFSLP 69
          SAFIFSLP
Sbjct: 61 SAFIFSLP 68

The following BLAST results are available for this feature:
BLAST of Csa6G471010 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KFH4_CUCSA2.7e-33100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G471010 PE=4 SV=1[more]
BLAST of Csa6G471010 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700193104|gb|KGN48308.1|3.8e-33100.00hypothetical protein Csa_6G471010 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G471010.1Csa6G471010.1mRNA