Csa6G446460 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCATGGTAAATAGTTCACAAATAACTTCATGACACGTGTTGGCTTTTTCTAGAAGTGACCACGTCATTCCCCAAATTTAATTTACTGAGAAAATGGAAGTAAGTCCCCTCAGTTCTCGAAATTACAATAAAACCCCAATTTTCAACGTTATTGAAAATCACCAGAAAATCCAACGAAGAGAAAAGAAATGAATGGCATCCGCATCGGCATCTTCATCATCGTCAGCAGCTTTTGCAATCGGCCCTCTCATTCGCAATCGCTCTACCAGATTCCTTCCATGTCCAAACCTTCACCATAAATGGAGCTTCAAAGATGCTCCTTCTCATTCTCGACTCTCCCTTTTCAATTATTCTAGCTCTTCTCCTCTTCTTCCTTCTCTTTCGATTCGTCATCGTTTTCTTCTTCCTCATCCTCCTTTTCATCTTCTGCTCCGATCTCGTTCACCTTCTTTTCGATATCCTCTGCCATTAATGGCCTCCACAGTTCCTGATCAAGCCGGTCCGGAGACTCCACATTCTAATCCAACGAAAACGGTGAGTTTTGCTTTTTGATCTCTCTTGCTTGGTGATGGATGCAGTGTTGAATTTTCGTAGTAATTAATTAGGGTTTTGGAAATTTCAGGTTAGGGTTGTGATTAAGGGTAGGGTTCAGGGAGTGTTCTATCGGGATTGGACGGTGGGGAATGCTACTGAGTTAGGGTTAAAAGGATGGGTGCGGAATCGGAGGGATGGATCCGTTGAGGCGCTTTTCTCCGGCCGCCCTGAATCGGTGACAGAAATGGAGCAACGGTGTCGGCGTGGTCCGCCGGAGGCGATGGTGACCGGATTTCAGGTTTTTCCTAGCTCCGATGACCCAGGACCCGGGTTTGAGCGCTTACGAACCGCGTGATTGATTGTGAATGTGGAACCGACCGACCGGAATGGCTTCGTGTAAGAGAGAATGGAATTCTTAATCATTTGGGGTCGTTTATTTATTTTTGTTTGAAGAAAAAAAATAAGGAAATTAAAGCAGTGGAACTTTTTTAAAAATATATATAAATAGCAATCACTTGTAAATTGTTAGTGCTATCATTATCATATTATTAGTCCCTTTTAGGGTACATATCCATGTTTGAACAGAACAAAACAAGACGTCACTCCTGTATGGAGATTATATAAAAGAGATATAATCTCGATTAATAACGAACTAAAAAGATTATAGGTATAAGTTTAATATAAATGATCATCTA ATGGCATCCGCATCGGCATCTTCATCATCGTCAGCAGCTTTTGCAATCGGCCCTCTCATTCGCAATCGCTCTACCAGATTCCTTCCATGTCCAAACCTTCACCATAAATGGAGCTTCAAAGATGCTCCTTCTCATTCTCGACTCTCCCTTTTCAATTATTCTAGCTCTTCTCCTCTTCTTCCTTCTCTTTCGATTCGTCATCGTTTTCTTCTTCCTCATCCTCCTTTTCATCTTCTGCTCCGATCTCGTTCACCTTCTTTTCGATATCCTCTGCCATTAATGGCCTCCACAGTTCCTGATCAAGCCGGTCCGGAGACTCCACATTCTAATCCAACGAAAACGGTTAGGGTTGTGATTAAGGGTAGGGTTCAGGGAGTGTTCTATCGGGATTGGACGGTGGGGAATGCTACTGAGTTAGGGTTAAAAGGATGGGTGCGGAATCGGAGGGATGGATCCGTTGAGGCGCTTTTCTCCGGCCGCCCTGAATCGGTGACAGAAATGGAGCAACGGTGTCGGCGTGGTCCGCCGGAGGCGATGGTGACCGGATTTCAGGTTTTTCCTAGCTCCGATGACCCAGGACCCGGGTTTGAGCGCTTACGAACCGCGTGA ATGGCATCCGCATCGGCATCTTCATCATCGTCAGCAGCTTTTGCAATCGGCCCTCTCATTCGCAATCGCTCTACCAGATTCCTTCCATGTCCAAACCTTCACCATAAATGGAGCTTCAAAGATGCTCCTTCTCATTCTCGACTCTCCCTTTTCAATTATTCTAGCTCTTCTCCTCTTCTTCCTTCTCTTTCGATTCGTCATCGTTTTCTTCTTCCTCATCCTCCTTTTCATCTTCTGCTCCGATCTCGTTCACCTTCTTTTCGATATCCTCTGCCATTAATGGCCTCCACAGTTCCTGATCAAGCCGGTCCGGAGACTCCACATTCTAATCCAACGAAAACGGTTAGGGTTGTGATTAAGGGTAGGGTTCAGGGAGTGTTCTATCGGGATTGGACGGTGGGGAATGCTACTGAGTTAGGGTTAAAAGGATGGGTGCGGAATCGGAGGGATGGATCCGTTGAGGCGCTTTTCTCCGGCCGCCCTGAATCGGTGACAGAAATGGAGCAACGGTGTCGGCGTGGTCCGCCGGAGGCGATGGTGACCGGATTTCAGGTTTTTCCTAGCTCCGATGACCCAGGACCCGGGTTTGAGCGCTTACGAACCGCGTGA MASASASSSSSAAFAIGPLIRNRSTRFLPCPNLHHKWSFKDAPSHSRLSLFNYSSSSPLLPSLSIRHRFLLPHPPFHLLLRSRSPSFRYPLPLMASTVPDQAGPETPHSNPTKTVRVVIKGRVQGVFYRDWTVGNATELGLKGWVRNRRDGSVEALFSGRPESVTEMEQRCRRGPPEAMVTGFQVFPSSDDPGPGFERLRTA*
BLAST of Csa6G446460 vs. Swiss-Prot
Match: ACYP_RHORT (Acylphosphatase OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIB 8255 / S1) GN=acyP PE=3 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 6.6e-17 Identity = 46/86 (53.49%), Postives = 52/86 (60.47%), Query Frame = 1
BLAST of Csa6G446460 vs. Swiss-Prot
Match: ACYP_NITHX (Acylphosphatase OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=acyP PE=3 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 4.3e-16 Identity = 45/92 (48.91%), Postives = 57/92 (61.96%), Query Frame = 1
BLAST of Csa6G446460 vs. Swiss-Prot
Match: ACYP_SPHWW (Acylphosphatase OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=acyP PE=3 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 5.6e-16 Identity = 43/78 (55.13%), Postives = 51/78 (65.38%), Query Frame = 1
BLAST of Csa6G446460 vs. Swiss-Prot
Match: ACYP_RHOPB (Acylphosphatase OS=Rhodopseudomonas palustris (strain BisB18) GN=acyP PE=3 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 5.6e-16 Identity = 48/92 (52.17%), Postives = 55/92 (59.78%), Query Frame = 1
BLAST of Csa6G446460 vs. Swiss-Prot
Match: ACYP_BRADU (Acylphosphatase OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) GN=acyP PE=3 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 7.3e-16 Identity = 40/66 (60.61%), Postives = 46/66 (69.70%), Query Frame = 1
BLAST of Csa6G446460 vs. TrEMBL
Match: A0A0A0KK97_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G446460 PE=3 SV=1) HSP 1 Score: 416.0 bits (1068), Expect = 2.6e-113 Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 1
BLAST of Csa6G446460 vs. TrEMBL
Match: W9QKU6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_002169 PE=3 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 8.6e-48 Identity = 116/208 (55.77%), Postives = 141/208 (67.79%), Query Frame = 1
BLAST of Csa6G446460 vs. TrEMBL
Match: B9S0H5_RICCO (Acylphosphatase, putative OS=Ricinus communis GN=RCOM_1355010 PE=3 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 1.4e-45 Identity = 104/196 (53.06%), Postives = 124/196 (63.27%), Query Frame = 1
BLAST of Csa6G446460 vs. TrEMBL
Match: A0A0D2SGV7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G414600 PE=3 SV=1) HSP 1 Score: 190.7 bits (483), Expect = 1.8e-45 Identity = 110/189 (58.20%), Postives = 123/189 (65.08%), Query Frame = 1
BLAST of Csa6G446460 vs. TrEMBL
Match: U5FKJ4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s09610g PE=3 SV=1) HSP 1 Score: 188.3 bits (477), Expect = 8.9e-45 Identity = 109/215 (50.70%), Postives = 134/215 (62.33%), Query Frame = 1
BLAST of Csa6G446460 vs. TAIR10
Match: AT5G03370.1 (AT5G03370.1 acylphosphatase family) HSP 1 Score: 149.1 bits (375), Expect = 3.0e-36 Identity = 79/135 (58.52%), Postives = 94/135 (69.63%), Query Frame = 1
BLAST of Csa6G446460 vs. NCBI nr
Match: gi|449451044|ref|XP_004143272.1| (PREDICTED: uncharacterized protein LOC101221855 [Cucumis sativus]) HSP 1 Score: 416.0 bits (1068), Expect = 3.8e-113 Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 1
BLAST of Csa6G446460 vs. NCBI nr
Match: gi|659125026|ref|XP_008462471.1| (PREDICTED: uncharacterized protein LOC103500820 [Cucumis melo]) HSP 1 Score: 382.5 bits (981), Expect = 4.6e-103 Identity = 187/199 (93.97%), Postives = 189/199 (94.97%), Query Frame = 1
BLAST of Csa6G446460 vs. NCBI nr
Match: gi|703062090|ref|XP_010086645.1| (hypothetical protein L484_002169 [Morus notabilis]) HSP 1 Score: 198.4 bits (503), Expect = 1.2e-47 Identity = 116/208 (55.77%), Postives = 141/208 (67.79%), Query Frame = 1
BLAST of Csa6G446460 vs. NCBI nr
Match: gi|645277915|ref|XP_008243995.1| (PREDICTED: uncharacterized protein LOC103342174 [Prunus mume]) HSP 1 Score: 192.6 bits (488), Expect = 6.8e-46 Identity = 113/210 (53.81%), Postives = 136/210 (64.76%), Query Frame = 1
BLAST of Csa6G446460 vs. NCBI nr
Match: gi|255556922|ref|XP_002519494.1| (PREDICTED: uncharacterized protein LOC8284487 isoform X1 [Ricinus communis]) HSP 1 Score: 191.0 bits (484), Expect = 2.0e-45 Identity = 104/196 (53.06%), Postives = 124/196 (63.27%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |