Csa6G445060 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G445060
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 20691215 .. 20691535 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCAACTGGGTCAAGTGGGGATGGGGAGGTTATGAAGGCAGCGAGATTGAAACGTTCTTGAAGAGCCAAATTGGAATATTAAAATGGAGGGGAGTTGACGACCGAGTAACCAAAAACAGAGCCACCATGGGTCGAAGCGTGGGAAAAAGAAAGTCGTGAAATGGGATAAATTTGATTTGGAAAGGAAAGGAAAGGAAAGGAAGGGATGAAAAGGGGAATTCTGGTCAACGCTTTGTGGGTCATCAAAATTACAGCTTTAAGGAACAGCATCAATCATCATCAACTTCGAATGTGGAGGGAAAACATAGAGAGTTGTAG

mRNA sequence

ATGGGCAACTGGGTCAAGTGGGGATGGGGAGGTTATGAAGGCAGCGAGATTGAAACGTTCTTGAAGAGCCAAATTGGAATATTAAAATGGAGGGGAGTTGACGACCGAGAAAGGAAAGGAAGGGATGAAAAGGGGAATTCTGGTCAACGCTTTGTGGGTCATCAAAATTACAGCTTTAAGGAACAGCATCAATCATCATCAACTTCGAATGTGGAGGGAAAACATAGAGAGTTGTAG

Coding sequence (CDS)

ATGGGCAACTGGGTCAAGTGGGGATGGGGAGGTTATGAAGGCAGCGAGATTGAAACGTTCTTGAAGAGCCAAATTGGAATATTAAAATGGAGGGGAGTTGACGACCGAGAAAGGAAAGGAAGGGATGAAAAGGGGAATTCTGGTCAACGCTTTGTGGGTCATCAAAATTACAGCTTTAAGGAACAGCATCAATCATCATCAACTTCGAATGTGGAGGGAAAACATAGAGAGTTGTAG

Protein sequence

MGNWVKWGWGGYEGSEIETFLKSQIGILKWRGVDDRERKGRDEKGNSGQRFVGHQNYSFKEQHQSSSTSNVEGKHREL*
Homology
[Close]
BLAST of Csa6G445060 vs. TrEMBL
Match: A0A0A0KK53_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G445060 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 7.5e-40
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 1 

Query: 1  MGNWVKWGWGGYEGSEIETFLKSQIGILKWRGVDDRERKGRDEKGNSGQRFVGHQNYSFK 60
          MGNWVKWGWGGYEGSEIETFLKSQIGILKWRGVDDRERKGRDEKGNSGQRFVGHQNYSFK
Sbjct: 1  MGNWVKWGWGGYEGSEIETFLKSQIGILKWRGVDDRERKGRDEKGNSGQRFVGHQNYSFK 60

Query: 61 EQHQSSSTSNVEGKHREL 79
          EQHQSSSTSNVEGKHREL
Sbjct: 61 EQHQSSSTSNVEGKHREL 78

[Close]
BLAST of Csa6G445060 vs. NCBI nr
Match: gi|700192937|gb|KGN48141.1| (hypothetical protein Csa_6G445060 [Cucumis sativus])

HSP 1 Score: 170.6 bits (431), Expect = 1.1e-39
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 1 

Query: 1  MGNWVKWGWGGYEGSEIETFLKSQIGILKWRGVDDRERKGRDEKGNSGQRFVGHQNYSFK 60
          MGNWVKWGWGGYEGSEIETFLKSQIGILKWRGVDDRERKGRDEKGNSGQRFVGHQNYSFK
Sbjct: 1  MGNWVKWGWGGYEGSEIETFLKSQIGILKWRGVDDRERKGRDEKGNSGQRFVGHQNYSFK 60

Query: 61 EQHQSSSTSNVEGKHREL 79
          EQHQSSSTSNVEGKHREL
Sbjct: 61 EQHQSSSTSNVEGKHREL 78

The following BLAST results are available for this feature:
BLAST of Csa6G445060 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KK53_CUCSA7.5e-40100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G445060 PE=4 SV=1[more]
BLAST of Csa6G445060 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700192937|gb|KGN48141.1|1.1e-39100.00hypothetical protein Csa_6G445060 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G445060.1Csa6G445060.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa6G445060Wax gourdcuwgoB529
Csa6G445060Wax gourdcuwgoB624
Csa6G445060Cucumber (Chinese Long) v2cucuB109
Csa6G445060Cucumber (Gy14) v1cgycuB167
Csa6G445060Cucumber (Gy14) v1cgycuB439
Csa6G445060Cucurbita maxima (Rimu)cmacuB267
Csa6G445060Cucurbita maxima (Rimu)cmacuB681
Csa6G445060Cucurbita maxima (Rimu)cmacuB840
Csa6G445060Cucurbita maxima (Rimu)cmacuB878
Csa6G445060Cucurbita moschata (Rifu)cmocuB253
Csa6G445060Cucurbita moschata (Rifu)cmocuB670
Csa6G445060Cucurbita moschata (Rifu)cmocuB828
Csa6G445060Cucurbita moschata (Rifu)cmocuB865
Csa6G445060Melon (DHL92) v3.5.1cumeB484
Csa6G445060Melon (DHL92) v3.5.1cumeB490
Csa6G445060Watermelon (Charleston Gray)cuwcgB424
Csa6G445060Watermelon (Charleston Gray)cuwcgB464
Csa6G445060Watermelon (97103) v1cuwmB452
Csa6G445060Watermelon (97103) v1cuwmB505
Csa6G445060Cucurbita pepo (Zucchini)cpecuB085
Csa6G445060Cucurbita pepo (Zucchini)cpecuB503
Csa6G445060Cucurbita pepo (Zucchini)cpecuB624
Csa6G445060Bottle gourd (USVL1VR-Ls)culsiB435
Csa6G445060Bottle gourd (USVL1VR-Ls)culsiB445
Csa6G445060Cucumber (Gy14) v2cgybcuB137
Csa6G445060Cucumber (Gy14) v2cgybcuB281
Csa6G445060Melon (DHL92) v3.6.1cumedB470
Csa6G445060Melon (DHL92) v3.6.1cumedB464
Csa6G445060Silver-seed gourdcarcuB0181
Csa6G445060Silver-seed gourdcarcuB0278
Csa6G445060Silver-seed gourdcarcuB0450
Csa6G445060Silver-seed gourdcarcuB0579
Csa6G445060Watermelon (97103) v2cuwmbB418
Csa6G445060Watermelon (97103) v2cuwmbB455