Csa6G407090 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCATGGATTCTCTACAGTTGACGGCTTTGTGGAGATAGCTGAAAGCTCGGCAGAGATGATCAAGTATATAGCAAATGAACCTTCAACTGGGCTTTTCTACATTCAACAGCATACAAAAAATGCTGTTCCCAATGTTATCAATCTGAAGAATAGTGTGGTACACAAATCTCATGAAACAACTCTCCACACTGAAGATTCGGAGGATTCGATCACGATGTTAAGATCGATGAAAGAATGTGGTTTTCCTATTGCTGATGAGATGATCAGAGACATAAGGAAGTCTCTTGCTATAATGTCAACCAAACAGCCAAGAAGGGGCTTGATCCATAATACTTCTGGCATGCAGCAACAACAGCCAGGGAGAATGAGCACCTGGAGATCGACCAGTTGGGGGCGAAGAGCAATTGGAGCCCCATTTAATGATGACAGTGGAGGTTATATTTCAACAGTATTCAAGTCAGCAAGAGAAAAGGCGAGCAACTTTAAGTGGCCACAGCTTGACATCAAGGAAGATCTTGCAGAAGTTGAAGTTGATAAACTACAGCCACAAGCTATCCAACCGCCAGTTGCTTCTACTACTTCTAGCTCGTCACAGCCAGATGTGGACAATGAGGAGTTGCCTCTGTCCAGTCAAGTTAATGATCAGTCGCAACAGGATGACATGGTTGATGAATGCTTGAATACTGATTTACTTTCGGTGTCCGATAACTTCGATGATTTCAGGGCTGATAAAGAAGCGAAACTGGAGGAGTGGTTGGGAGGATCTAGCGGCTTGAATAATTTAAGAGATTTGAGGGCAGGGTAAGGCCATTGACATTGATTTTGAAGTAGTGTTGATGCCTTTTACAGTGCCTTTTTTTACTGTAAAAATGATAATAACAAAAATCACTCTAGACACACGTTCTTTTCTTCATTTTGTCCGACCCCGAATTGCACTAGTGAAGAGTTGTATTTCCATAGCTTTGTAACATGATGTTATTCTTACTGGAATAAGTATTTACTGAGTGCCATATGTTCAATTTTACCTTTCACATTTGAAAACTGATAAAGGATTTCAATACAATTGTACCTAGAAGGTACTGGACTGTCTTGG ATGCATGGATTCTCTACAGTTGACGGCTTTGTGGAGATAGCTGAAAGCTCGGCAGAGATGATCAAGTATATAGCAAATGAACCTTCAACTGGGCTTTTCTACATTCAACAGCATACAAAAAATGCTGTTCCCAATGTTATCAATCTGAAGAATAGTGTGGTACACAAATCTCATGAAACAACTCTCCACACTGAAGATTCGGAGGATTCGATCACGATGTTAAGATCGATGAAAGAATGTGGTTTTCCTATTGCTGATGAGATGATCAGAGACATAAGGAAGTCTCTTGCTATAATGTCAACCAAACAGCCAAGAAGGGGCTTGATCCATAATACTTCTGGCATGCAGCAACAACAGCCAGGGAGAATGAGCACCTGGAGATCGACCAGTTGGGGGCGAAGAGCAATTGGAGCCCCATTTAATGATGACAGTGGAGGTTATATTTCAACAGTATTCAAGTCAGCAAGAGAAAAGGCGAGCAACTTTAAGTGGCCACAGCTTGACATCAAGGAAGATCTTGCAGAAGTTGAAGTTGATAAACTACAGCCACAAGCTATCCAACCGCCAGTTGCTTCTACTACTTCTAGCTCGTCACAGCCAGATGTGGACAATGAGGAGTTGCCTCTGTCCAGTCAAGTTAATGATCAGTCGCAACAGGATGACATGGTTGATGAATGCTTGAATACTGATTTACTTTCGGTGTCCGATAACTTCGATGATTTCAGGGCTGATAAAGAAGCGAAACTGGAGGAGTGGTTGGGAGGATCTAGCGGCTTGAATAATTTAAGAGATTTGAGGGCAGGGTAA ATGCATGGATTCTCTACAGTTGACGGCTTTGTGGAGATAGCTGAAAGCTCGGCAGAGATGATCAAGTATATAGCAAATGAACCTTCAACTGGGCTTTTCTACATTCAACAGCATACAAAAAATGCTGTTCCCAATGTTATCAATCTGAAGAATAGTGTGGTACACAAATCTCATGAAACAACTCTCCACACTGAAGATTCGGAGGATTCGATCACGATGTTAAGATCGATGAAAGAATGTGGTTTTCCTATTGCTGATGAGATGATCAGAGACATAAGGAAGTCTCTTGCTATAATGTCAACCAAACAGCCAAGAAGGGGCTTGATCCATAATACTTCTGGCATGCAGCAACAACAGCCAGGGAGAATGAGCACCTGGAGATCGACCAGTTGGGGGCGAAGAGCAATTGGAGCCCCATTTAATGATGACAGTGGAGGTTATATTTCAACAGTATTCAAGTCAGCAAGAGAAAAGGCGAGCAACTTTAAGTGGCCACAGCTTGACATCAAGGAAGATCTTGCAGAAGTTGAAGTTGATAAACTACAGCCACAAGCTATCCAACCGCCAGTTGCTTCTACTACTTCTAGCTCGTCACAGCCAGATGTGGACAATGAGGAGTTGCCTCTGTCCAGTCAAGTTAATGATCAGTCGCAACAGGATGACATGGTTGATGAATGCTTGAATACTGATTTACTTTCGGTGTCCGATAACTTCGATGATTTCAGGGCTGATAAAGAAGCGAAACTGGAGGAGTGGTTGGGAGGATCTAGCGGCTTGAATAATTTAAGAGATTTGAGGGCAGGGTAA MHGFSTVDGFVEIAESSAEMIKYIANEPSTGLFYIQQHTKNAVPNVINLKNSVVHKSHETTLHTEDSEDSITMLRSMKECGFPIADEMIRDIRKSLAIMSTKQPRRGLIHNTSGMQQQQPGRMSTWRSTSWGRRAIGAPFNDDSGGYISTVFKSAREKASNFKWPQLDIKEDLAEVEVDKLQPQAIQPPVASTTSSSSQPDVDNEELPLSSQVNDQSQQDDMVDECLNTDLLSVSDNFDDFRADKEAKLEEWLGGSSGLNNLRDLRAG*
BLAST of Csa6G407090 vs. TrEMBL
Match: A0A0A0KE70_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G407090 PE=4 SV=1) HSP 1 Score: 538.1 bits (1385), Expect = 6.1e-150 Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 1
BLAST of Csa6G407090 vs. TrEMBL
Match: M5X3F9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010138mg PE=4 SV=1) HSP 1 Score: 313.2 bits (801), Expect = 3.2e-82 Identity = 166/271 (61.25%), Postives = 198/271 (73.06%), Query Frame = 1
BLAST of Csa6G407090 vs. TrEMBL
Match: W9SAG6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_017051 PE=4 SV=1) HSP 1 Score: 296.2 bits (757), Expect = 4.0e-77 Identity = 156/264 (59.09%), Postives = 195/264 (73.86%), Query Frame = 1
BLAST of Csa6G407090 vs. TrEMBL
Match: A0A067KF42_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16158 PE=4 SV=1) HSP 1 Score: 291.2 bits (744), Expect = 1.3e-75 Identity = 151/258 (58.53%), Postives = 192/258 (74.42%), Query Frame = 1
BLAST of Csa6G407090 vs. TrEMBL
Match: A0A061FVG4_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_043282 PE=4 SV=1) HSP 1 Score: 290.8 bits (743), Expect = 1.7e-75 Identity = 155/265 (58.49%), Postives = 190/265 (71.70%), Query Frame = 1
BLAST of Csa6G407090 vs. TAIR10
Match: AT2G39170.1 (AT2G39170.1 unknown protein) HSP 1 Score: 219.5 bits (558), Expect = 2.4e-57 Identity = 128/262 (48.85%), Postives = 159/262 (60.69%), Query Frame = 1
BLAST of Csa6G407090 vs. NCBI nr
Match: gi|778716092|ref|XP_011657506.1| (PREDICTED: uncharacterized protein LOC101218921 [Cucumis sativus]) HSP 1 Score: 538.1 bits (1385), Expect = 8.7e-150 Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 1
BLAST of Csa6G407090 vs. NCBI nr
Match: gi|659113341|ref|XP_008456524.1| (PREDICTED: uncharacterized protein LOC103496452 isoform X1 [Cucumis melo]) HSP 1 Score: 520.8 bits (1340), Expect = 1.4e-144 Identity = 258/268 (96.27%), Postives = 264/268 (98.51%), Query Frame = 1
BLAST of Csa6G407090 vs. NCBI nr
Match: gi|659113345|ref|XP_008456526.1| (PREDICTED: uncharacterized protein LOC103496452 isoform X2 [Cucumis melo]) HSP 1 Score: 484.2 bits (1245), Expect = 1.5e-133 Identity = 239/249 (95.98%), Postives = 245/249 (98.39%), Query Frame = 1
BLAST of Csa6G407090 vs. NCBI nr
Match: gi|596015699|ref|XP_007218827.1| (hypothetical protein PRUPE_ppa010138mg [Prunus persica]) HSP 1 Score: 313.2 bits (801), Expect = 4.6e-82 Identity = 166/271 (61.25%), Postives = 198/271 (73.06%), Query Frame = 1
BLAST of Csa6G407090 vs. NCBI nr
Match: gi|645254951|ref|XP_008233273.1| (PREDICTED: uncharacterized protein LOC103332329 [Prunus mume]) HSP 1 Score: 305.8 bits (782), Expect = 7.3e-80 Identity = 162/267 (60.67%), Postives = 194/267 (72.66%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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