Csa6G382930 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCAGTCATCTGTCACCACGCCAACGTCGTTCATCCGCTCGGACCGCTGCCACCGTCGTCCTTCATTTCTCCCTTACTCCACAGTCCTTTTGGTGGTTTCCGCTCGCCGGCAAATTCTACTGAATTTTGTATTTCTTCTCTTCAGATCCTTTCCTTTTTTGATCTTTTCGAGACACAGGGTTGAGATGGATCCGAACTCCGTTAAGTCCACCCTTTCAAATTTAGCATTTGGAAATGTAATGGCTGCTGCAGCTCGTGATTATCAAAAGGTATTTGTACCATCAATTTGCCCTTCCAAAGTTGTGTTTTTTATTTAATTTTTTCTTTATTCGGATCTATTTCTCCAGCTTCGTTTTGAGATATCAATAGCGATCGGGTTATATTAGTGTCTGATTCTAGAAAGCATTAACATATCATCTATAACTGCAACTTCAGTTTATTGATCTGCAACCTAGACATTGCTGCATTGAATCAGATGATTCTTCTTCCTTCACCCCTATCAAATTGCTTTGTACATAACTACAGAACCTGGATCACACTCTTTTGGCATAATTTAACCTTATTCAATACAATGCAGCAATGTTTTTTTATTTTTCATTTATTTAAATGTGCTACAACTCTGCACCAGTGTGTTGTTATAGTTAACCTATGATTTAATCAGAGTGGCTTAGTTTGATAAATTGGACTGCGTTATATGAGGCTGACCTTCGATTCTTCTTATGTTGGTTCTTTTGTTTGAAAGTAGTAGTGAAGTATCAGTATGTTGTGATATATTTTTTCAAAATTTTGTTTCATAAGTACTTACTGGTTTCAAAGGTTAAACTCAAAATACCCCTCTAGGCTCTATCTGTGTTGTCCATATATGCATCTCTACTGGATTCCAGGCGTGTGATTCTCTCAGGAATCTTGCAACAAATTTTTTCCCTCAACTAAAAATTTCCCCATTTACATGTCCATCATAACATTGACCTTAGGGATTTTGGGCTTTACATTTATATTTCCTTAATGTGGGAACATTGACTCTTTGGGATCTCATTCTCTGACCTTTCTTTTCTTCGAAGCTCTTGGTAAATGATGCTCTTACCAAAAATTTTAAATTCAGAACATTTTATACTTCTTATGGATAACTGGGAATCGTTGAGGGCTGTGAAGTATGATTGCAGTTTTTACCGGTTTCTTGAATATATTTATGGACTTTACAGGAATTGCTTGCTCAAGGGAAGGCTCAGGCATCAAACTCTAACAACGAGGAAGTTGATCTTGACGAGTTGATGGATGTACGTTTAATGATTGGGGTCCTTCCATACTGCACTCTAATGCTCGTGATTTTCACTAATGTTTGCTTACCTGGGTCAGGATCCAGAGCTGGAAAAGTTGCATGCAGATAGAATTGCAGCCCTGAAGGTCTGAGTTTGTGTGTAGTTGTTTATATATGTTCTATCTTCATCTGCAATTTGGAGTTCTCCATTGGTCACCAAGTTAGGTTCCTATAGACTCGAAACATGTTTTTATAAGCTCCCATTAACATGGAAATTCAGTTCATGTTTACCAAACATGAAACTTTCGTTCATATTTACCAAACCCTTGGCCTTTATCCAATTGTATATTCTCCTGTGTGCAGTTCATTGTGATTCGTAATGTGTCACGATTGATTCTGATTTTCAGTTTGGTGCCAACTTTCCCAAATAGGCAATGCATTAACATTATCATTTGTTTAAGCAGAAGGAAGCTGAGAAGAGAGAAGCAATGAAGAGACAAGGGCATGGCGAATACAGAGAAATAACAGAGGGAGACTTTTTGGGAGAAGTCACTGGAAGTGAAAAAGTGATTTGCCACTTCTATCATCATGAATTCTATCGGTGCAAGTAAATCTTTAAATTTGAAATCCCTTACTAATCCAAACAATATGCGGTGTACATTGTAAAAGTCTCATATCGGATCCTTCTTTCTTAGGATTGTGGATAAGCATTTGAAGACTCTTGCACCAAAACATTTAGACACAAAATTCATCAAGCTTGACGCGGAGGTTGGTATAATTTTTTTTATTTTAACAGCAGTATCGGCTCTTTTTGAACCATTTGTTGTGAAAGTTTGTCCTCGTGAAGAACTTGTAGGGGCTAATTTTCTGAAAGAAAATTGCAGAATGCACCCTTCTTTGTTACTAAACTTGGAATCAAAACTCTGCCTTGCGTTGTTCTCTTCAGGTAAACATCAATTTTCCTTGGTCCAGTGATTCTTGTAGACATACCTTTCTAGTTAGTGAAAGGCAACTAGGTAGGGATTCTATTTGTTGCTAATATGTCAAAAGAAAAGGGGAACTATGTAAAAGAGACAGCCCCAGATTCGCGGATAGTGATAATATGGCTCAATTAGTTGTTCAGAGAGCTAAAAATCTTCTCATTATAATTAGTGCGAACATGGTTCAAGTAGTTGTTTTGAGAGTTATGACATGGTGCAGCTTTCTTCTCTCTTAACCTATTGGATAGAAGCCCAATGATTTTGTAAATTTCATACATCGATGAAATTTGTTTCTTATAAAAAATAAAGTTAGGGCAGGCTACACCTATCTATGGCCTCTTCATTTGCCACACGGCAAGAAAATAATAATTTAACCTTTTTGAAAATGTTCAAATTTCTTACAACAAGACATTTTTTAATTTAACAATTGCTGGGTTATAAAAAGATAGTTGTAGCTTGGGCTACACTCAAATATTGTTGATAAAATAACAGTAGTAGTTCTACATTTGGTGGGTTTGTGTGCACGAATCTGTTTTGAAGGACTTCGGTTCTTTTGGCTGCAGGAAAGGCGTTGCTACAGATAGGCTTGTTGGGTTCCAAGATTTAGGTGGAAAAGATGATTTCAGTACAAAGACGTTGGAAATTCTTTTGACAAAGAAAGGTGGATTTTCTATCGGATATGTTATATTAACTCTCAGTTATGTGACTTTCTGACCCTAAACACAATATTCAGGTATCATCAGTGAGAAAAAGGAAGAAGAGGAAGACGAGTACGATGAAAGCAGGCGAAGGTCAGTGAGATCCTCTATCAATATTGATTCCGACTCAGACTAGGGAACAGAGTTTGCCATTCTCCATTGAATTACAAAAAACATGTTGAAGTATTTTGTGAGTAAACTCCAAGACTGAACATAGTTTACAAGCTATTGACATTGAAGTTAAAACCATTATAATCTTAACGAGATTGATAAATCATTTACTTTAGTTCTTGATTAGATATTTAATAAACTTGTTTGTTCAATATAATTTTAAAAACAGACTACCTACAATTGCATTGTGTTTGAATAGACGAGTAGGAA ATGGATCCGAACTCCGTTAAGTCCACCCTTTCAAATTTAGCATTTGGAAATGTAATGGCTGCTGCAGCTCGTGATTATCAAAAGGAATTGCTTGCTCAAGGGAAGGCTCAGGCATCAAACTCTAACAACGAGGAAGTTGATCTTGACGAGTTGATGGATGATCCAGAGCTGGAAAAGTTGCATGCAGATAGAATTGCAGCCCTGAAGAAGGAAGCTGAGAAGAGAGAAGCAATGAAGAGACAAGGGCATGGCGAATACAGAGAAATAACAGAGGGAGACTTTTTGGGAGAAGTCACTGGAAGTGAAAAAGTGATTTGCCACTTCTATCATCATGAATTCTATCGGTGCAAGATTGTGGATAAGCATTTGAAGACTCTTGCACCAAAACATTTAGACACAAAATTCATCAAGCTTGACGCGGAGAATGCACCCTTCTTTGTTACTAAACTTGGAATCAAAACTCTGCCTTGCGTTGTTCTCTTCAGGAAAGGCGTTGCTACAGATAGGCTTGTTGGGTTCCAAGATTTAGGTGGAAAAGATGATTTCAGTACAAAGACGTTGGAAATTCTTTTGACAAAGAAAGGTATCATCAGTGAGAAAAAGGAAGAAGAGGAAGACGAGTACGATGAAAGCAGGCGAAGGTCAGTGAGATCCTCTATCAATATTGATTCCGACTCAGACTAG ATGGATCCGAACTCCGTTAAGTCCACCCTTTCAAATTTAGCATTTGGAAATGTAATGGCTGCTGCAGCTCGTGATTATCAAAAGGAATTGCTTGCTCAAGGGAAGGCTCAGGCATCAAACTCTAACAACGAGGAAGTTGATCTTGACGAGTTGATGGATGATCCAGAGCTGGAAAAGTTGCATGCAGATAGAATTGCAGCCCTGAAGAAGGAAGCTGAGAAGAGAGAAGCAATGAAGAGACAAGGGCATGGCGAATACAGAGAAATAACAGAGGGAGACTTTTTGGGAGAAGTCACTGGAAGTGAAAAAGTGATTTGCCACTTCTATCATCATGAATTCTATCGGTGCAAGATTGTGGATAAGCATTTGAAGACTCTTGCACCAAAACATTTAGACACAAAATTCATCAAGCTTGACGCGGAGAATGCACCCTTCTTTGTTACTAAACTTGGAATCAAAACTCTGCCTTGCGTTGTTCTCTTCAGGAAAGGCGTTGCTACAGATAGGCTTGTTGGGTTCCAAGATTTAGGTGGAAAAGATGATTTCAGTACAAAGACGTTGGAAATTCTTTTGACAAAGAAAGGTATCATCAGTGAGAAAAAGGAAGAAGAGGAAGACGAGTACGATGAAAGCAGGCGAAGGTCAGTGAGATCCTCTATCAATATTGATTCCGACTCAGACTAG MDPNSVKSTLSNLAFGNVMAAAARDYQKELLAQGKAQASNSNNEEVDLDELMDDPELEKLHADRIAALKKEAEKREAMKRQGHGEYREITEGDFLGEVTGSEKVICHFYHHEFYRCKIVDKHLKTLAPKHLDTKFIKLDAENAPFFVTKLGIKTLPCVVLFRKGVATDRLVGFQDLGGKDDFSTKTLEILLTKKGIISEKKEEEEDEYDESRRRSVRSSINIDSDSD*
BLAST of Csa6G382930 vs. Swiss-Prot
Match: PLP3B_ARATH (Thioredoxin domain-containing protein PLP3B OS=Arabidopsis thaliana GN=PLP3B PE=2 SV=1) HSP 1 Score: 373.2 bits (957), Expect = 2.0e-102 Identity = 184/230 (80.00%), Postives = 204/230 (88.70%), Query Frame = 1
BLAST of Csa6G382930 vs. Swiss-Prot
Match: PLP3A_ARATH (Thioredoxin domain-containing protein PLP3A OS=Arabidopsis thaliana GN=PLP3A PE=1 SV=1) HSP 1 Score: 372.5 bits (955), Expect = 3.4e-102 Identity = 186/230 (80.87%), Postives = 205/230 (89.13%), Query Frame = 1
BLAST of Csa6G382930 vs. Swiss-Prot
Match: TXND9_MOUSE (Thioredoxin domain-containing protein 9 OS=Mus musculus GN=Txndc9 PE=1 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 1.9e-36 Identity = 86/212 (40.57%), Postives = 126/212 (59.43%), Query Frame = 1
BLAST of Csa6G382930 vs. Swiss-Prot
Match: TXND9_HUMAN (Thioredoxin domain-containing protein 9 OS=Homo sapiens GN=TXNDC9 PE=1 SV=2) HSP 1 Score: 152.5 bits (384), Expect = 5.5e-36 Identity = 84/212 (39.62%), Postives = 125/212 (58.96%), Query Frame = 1
BLAST of Csa6G382930 vs. Swiss-Prot
Match: TXND9_RAT (Thioredoxin domain-containing protein 9 OS=Rattus norvegicus GN=Txndc9 PE=2 SV=2) HSP 1 Score: 151.8 bits (382), Expect = 9.3e-36 Identity = 85/212 (40.09%), Postives = 125/212 (58.96%), Query Frame = 1
BLAST of Csa6G382930 vs. TrEMBL
Match: A0A0A0KDC1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G382930 PE=4 SV=1) HSP 1 Score: 452.6 bits (1163), Expect = 2.8e-124 Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 1
BLAST of Csa6G382930 vs. TrEMBL
Match: A0A061DLY2_THECC (Phosducin-like protein 3 isoform 1 OS=Theobroma cacao GN=TCM_000308 PE=4 SV=1) HSP 1 Score: 397.1 bits (1019), Expect = 1.4e-107 Identity = 195/230 (84.78%), Postives = 216/230 (93.91%), Query Frame = 1
BLAST of Csa6G382930 vs. TrEMBL
Match: A0A0B0M800_GOSAR (Phosducin-like protein 3 OS=Gossypium arboreum GN=F383_11401 PE=4 SV=1) HSP 1 Score: 392.1 bits (1006), Expect = 4.6e-106 Identity = 195/229 (85.15%), Postives = 213/229 (93.01%), Query Frame = 1
BLAST of Csa6G382930 vs. TrEMBL
Match: A0A067L027_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08305 PE=4 SV=1) HSP 1 Score: 389.8 bits (1000), Expect = 2.3e-105 Identity = 192/230 (83.48%), Postives = 214/230 (93.04%), Query Frame = 1
BLAST of Csa6G382930 vs. TrEMBL
Match: A0A059ARV5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I02400 PE=4 SV=1) HSP 1 Score: 389.8 bits (1000), Expect = 2.3e-105 Identity = 194/230 (84.35%), Postives = 211/230 (91.74%), Query Frame = 1
BLAST of Csa6G382930 vs. TAIR10
Match: AT5G66410.1 (AT5G66410.1 phosducin-like protein 3 homolog) HSP 1 Score: 373.2 bits (957), Expect = 1.1e-103 Identity = 184/230 (80.00%), Postives = 204/230 (88.70%), Query Frame = 1
BLAST of Csa6G382930 vs. TAIR10
Match: AT3G50960.1 (AT3G50960.1 phosducin-like protein 3 homolog) HSP 1 Score: 372.5 bits (955), Expect = 1.9e-103 Identity = 186/230 (80.87%), Postives = 205/230 (89.13%), Query Frame = 1
BLAST of Csa6G382930 vs. TAIR10
Match: AT3G25580.1 (AT3G25580.1 Thioredoxin superfamily protein) HSP 1 Score: 150.6 bits (379), Expect = 1.2e-36 Identity = 82/203 (40.39%), Postives = 122/203 (60.10%), Query Frame = 1
BLAST of Csa6G382930 vs. TAIR10
Match: AT2G18990.1 (AT2G18990.1 thioredoxin domain-containing protein 9 homolog) HSP 1 Score: 147.9 bits (372), Expect = 7.6e-36 Identity = 82/204 (40.20%), Postives = 120/204 (58.82%), Query Frame = 1
BLAST of Csa6G382930 vs. NCBI nr
Match: gi|449464172|ref|XP_004149803.1| (PREDICTED: thioredoxin domain-containing protein PLP3B [Cucumis sativus]) HSP 1 Score: 452.6 bits (1163), Expect = 4.1e-124 Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 1
BLAST of Csa6G382930 vs. NCBI nr
Match: gi|659133453|ref|XP_008466737.1| (PREDICTED: thioredoxin domain-containing protein PLP3B-like [Cucumis melo]) HSP 1 Score: 448.0 bits (1151), Expect = 1.0e-122 Identity = 223/227 (98.24%), Postives = 225/227 (99.12%), Query Frame = 1
BLAST of Csa6G382930 vs. NCBI nr
Match: gi|1009144806|ref|XP_015890001.1| (PREDICTED: thioredoxin domain-containing protein PLP3B [Ziziphus jujuba]) HSP 1 Score: 397.5 bits (1020), Expect = 1.6e-107 Identity = 199/230 (86.52%), Postives = 216/230 (93.91%), Query Frame = 1
BLAST of Csa6G382930 vs. NCBI nr
Match: gi|590703293|ref|XP_007046835.1| (Phosducin-like protein 3 isoform 1 [Theobroma cacao]) HSP 1 Score: 397.1 bits (1019), Expect = 2.0e-107 Identity = 195/230 (84.78%), Postives = 216/230 (93.91%), Query Frame = 1
BLAST of Csa6G382930 vs. NCBI nr
Match: gi|747072541|ref|XP_011083186.1| (PREDICTED: thioredoxin domain-containing protein PLP3B [Sesamum indicum]) HSP 1 Score: 393.3 bits (1009), Expect = 2.9e-106 Identity = 196/228 (85.96%), Postives = 210/228 (92.11%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|