Csa6G373200 (gene) Cucumber (Chinese Long) v2

NameCsa6G373200
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 16891553 .. 16891847 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGATGTAACAGCCATGGCTGAGCAGCAGAGCTTCCGCCGCACAGAGGCAGTTAACGGTGAACGGAGCCGCCGTGGGGGCGCTTTAGACGGCCGGATTTGTCTGTTGCCGAACACGAGCGAGTTTCAGTGGGATGCATCCGTCAGAAGAATCCCATTCAACTAACCTCACGCTTTGCTCGTGACTTTTCTCGTTTTAGGCCGATCTATCTTTCGGGCCGACCCAAAACAATAGGTTTGGGCTCCATATTGGGCCTGTGTTTTGGATTCATGAAGCCCGTTTCTCATCTTAA

mRNA sequence

ATGGAAGATGTAACAGCCATGGCTGAGCAGCAGAGCTTCCGCCGCACAGAGGCAGTTAACGGTGAACGGAGCCGCCGTGGGGGCGCTTTAGACGGCCGGATTTGTCTGTTGCCGAACACGAGCGAGTTTCAGTGGGATGCATCCGCCGATCTATCTTTCGGGCCGACCCAAAACAATAGGTTTGGGCTCCATATTGGGCCTGTGTTTTGGATTCATGAAGCCCGTTTCTCATCTTAA

Coding sequence (CDS)

ATGGAAGATGTAACAGCCATGGCTGAGCAGCAGAGCTTCCGCCGCACAGAGGCAGTTAACGGTGAACGGAGCCGCCGTGGGGGCGCTTTAGACGGCCGGATTTGTCTGTTGCCGAACACGAGCGAGTTTCAGTGGGATGCATCCGCCGATCTATCTTTCGGGCCGACCCAAAACAATAGGTTTGGGCTCCATATTGGGCCTGTGTTTTGGATTCATGAAGCCCGTTTCTCATCTTAA

Protein sequence

MEDVTAMAEQQSFRRTEAVNGERSRRGGALDGRICLLPNTSEFQWDASADLSFGPTQNNRFGLHIGPVFWIHEARFSS*
BLAST of Csa6G373200 vs. TrEMBL
Match: A0A0A0KIS7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G373200 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 7.0e-38
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 1

Query: 1  MEDVTAMAEQQSFRRTEAVNGERSRRGGALDGRICLLPNTSEFQWDASADLSFGPTQNNR 60
          MEDVTAMAEQQSFRRTEAVNGERSRRGGALDGRICLLPNTSEFQWDASADLSFGPTQNNR
Sbjct: 1  MEDVTAMAEQQSFRRTEAVNGERSRRGGALDGRICLLPNTSEFQWDASADLSFGPTQNNR 60

Query: 61 FGLHIGPVFWIHEARFSS 79
          FGLHIGPVFWIHEARFSS
Sbjct: 61 FGLHIGPVFWIHEARFSS 78

BLAST of Csa6G373200 vs. NCBI nr
Match: gi|700192472|gb|KGN47676.1| (hypothetical protein Csa_6G373200 [Cucumis sativus])

HSP 1 Score: 164.1 bits (414), Expect = 1.0e-37
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 1

Query: 1  MEDVTAMAEQQSFRRTEAVNGERSRRGGALDGRICLLPNTSEFQWDASADLSFGPTQNNR 60
          MEDVTAMAEQQSFRRTEAVNGERSRRGGALDGRICLLPNTSEFQWDASADLSFGPTQNNR
Sbjct: 1  MEDVTAMAEQQSFRRTEAVNGERSRRGGALDGRICLLPNTSEFQWDASADLSFGPTQNNR 60

Query: 61 FGLHIGPVFWIHEARFSS 79
          FGLHIGPVFWIHEARFSS
Sbjct: 61 FGLHIGPVFWIHEARFSS 78

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KIS7_CUCSA7.0e-38100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G373200 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700192472|gb|KGN47676.1|1.0e-37100.00hypothetical protein Csa_6G373200 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU095073cucumber EST collection version 3.0transcribed_cluster
CU127191cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G373200.1Csa6G373200.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU127191CU127191transcribed_cluster
CU095073CU095073transcribed_cluster


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa6G373200MELO3C011398Melon (DHL92) v3.5.1cumeB466
Csa6G373200ClCG08G010630Watermelon (Charleston Gray)cuwcgB496
Csa6G373200MELO3C011398.2Melon (DHL92) v3.6.1cumedB447
Csa6G373200CSPI06G19910Wild cucumber (PI 183967)cpicuB313
The following gene(s) are paralogous to this gene:

None