Csa6G358150 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G358150
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 16067789 .. 16067977 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGGAAGTGGATGGGTGGAGCTGAGTTGTTTTTACCTTTTTTACATTATGCGGAATTTATGTGGCGAAGATTACTATGCCAACGGAAAGCAAACGTGCAGTGATATAAAATATGATGGAATGATGGGCGTTTCTGATTCCATGTCCGCCTCCGGTTTCTTTTTTTCATTTCAATCAACTATATAA

mRNA sequence

ATGGGAGGAAGTGGATGGGTGGAGCTGAGTTGTTTTTACCTTTTTTACATTATGCGGAATTTATGTGGCGAAGATTACTATGCCAACGGAAAGCAAACGTGCAGTGATATAAAATATGATGGAATGATGGGCGTTTCTGATTCCATGTCCGCCTCCGGTTTCTTTTTTTCATTTCAATCAACTATATAA

Coding sequence (CDS)

ATGGGAGGAAGTGGATGGGTGGAGCTGAGTTGTTTTTACCTTTTTTACATTATGCGGAATTTATGTGGCGAAGATTACTATGCCAACGGAAAGCAAACGTGCAGTGATATAAAATATGATGGAATGATGGGCGTTTCTGATTCCATGTCCGCCTCCGGTTTCTTTTTTTCATTTCAATCAACTATATAA

Protein sequence

MGGSGWVELSCFYLFYIMRNLCGEDYYANGKQTCSDIKYDGMMGVSDSMSASGFFFSFQSTI*
Homology
[Close]
BLAST of Csa6G358150 vs. TrEMBL
Match: A0A0A0KIH6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G358150 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 2.8e-29
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 1 

Query: 1  MGGSGWVELSCFYLFYIMRNLCGEDYYANGKQTCSDIKYDGMMGVSDSMSASGFFFSFQS 60
          MGGSGWVELSCFYLFYIMRNLCGEDYYANGKQTCSDIKYDGMMGVSDSMSASGFFFSFQS
Sbjct: 1  MGGSGWVELSCFYLFYIMRNLCGEDYYANGKQTCSDIKYDGMMGVSDSMSASGFFFSFQS 60

Query: 61 TI 63
          TI
Sbjct: 61 TI 62

[Close]
BLAST of Csa6G358150 vs. NCBI nr
Match: gi|700192347|gb|KGN47551.1| (hypothetical protein Csa_6G358150 [Cucumis sativus])

HSP 1 Score: 135.2 bits (339), Expect = 4.0e-29
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 1 

Query: 1  MGGSGWVELSCFYLFYIMRNLCGEDYYANGKQTCSDIKYDGMMGVSDSMSASGFFFSFQS 60
          MGGSGWVELSCFYLFYIMRNLCGEDYYANGKQTCSDIKYDGMMGVSDSMSASGFFFSFQS
Sbjct: 1  MGGSGWVELSCFYLFYIMRNLCGEDYYANGKQTCSDIKYDGMMGVSDSMSASGFFFSFQS 60

Query: 61 TI 63
          TI
Sbjct: 61 TI 62

The following BLAST results are available for this feature:
BLAST of Csa6G358150 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KIH6_CUCSA2.8e-29100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G358150 PE=4 SV=1[more]
BLAST of Csa6G358150 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700192347|gb|KGN47551.1|4.0e-29100.00hypothetical protein Csa_6G358150 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G358150.1Csa6G358150.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa6G358150Cucumber (Gy14) v1cgycuB074
Csa6G358150Cucurbita maxima (Rimu)cmacuB195
Csa6G358150Cucurbita maxima (Rimu)cmacuB806
Csa6G358150Cucurbita moschata (Rifu)cmocuB179
Csa6G358150Cucurbita moschata (Rifu)cmocuB797
Csa6G358150Melon (DHL92) v3.5.1cumeB466
Csa6G358150Watermelon (Charleston Gray)cuwcgB496
Csa6G358150Watermelon (97103) v1cuwmB456
Csa6G358150Cucurbita pepo (Zucchini)cpecuB120
Csa6G358150Cucurbita pepo (Zucchini)cpecuB841
Csa6G358150Bottle gourd (USVL1VR-Ls)culsiB470
Csa6G358150Cucumber (Gy14) v2cgybcuB189
Csa6G358150Cucumber (Gy14) v2cgybcuB281
Csa6G358150Melon (DHL92) v3.6.1cumedB447
Csa6G358150Silver-seed gourdcarcuB0146
Csa6G358150Silver-seed gourdcarcuB0236
Csa6G358150Watermelon (97103) v2cuwmbB487
Csa6G358150Wax gourdcuwgoB587