Csa6G312570 (gene) Cucumber (Chinese Long) v2

NameCsa6G312570
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 14898740 .. 14899057 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTAACATGGGCCGATCAATACTAGACCAACCGAGTTCAAAATCCAACTCACTAAACATGCCCTCGGGTTCCCGAATTTCCGCTCGTCGAAGATATTCATCCATTCTGTTTCGCGCCAGTCTTCCTGCTGTAAAAACTGCGATCCGTTTCTCATTTATACTTCCTGATGCATTACCTTTTCCTGATTATGTTCTGATCGCCAATGCATCTTTGTTTTCTGGCTTCCTATGATTTGATTTTAAATTTTTTACTCCCATTGTAATTCATCCGTGTTTTTGGCCATTCGTGTTATGGAGTTCCATTTTGGATGCCAAT

mRNA sequence

ATGGTTAACATGGGCCGATCAATACTAGACCAACCGAGTTCAAAATCCAACTCACTAAACATGCCCTCGGGTTCCCGAATTTCCGCTCGTCGAAGATATTCATCCATTCTGTTTCGCGCCAGTCTTCCTGCTGTAAAAACTGCGATCCGTTTCTCATTTATACTTCCTGATGCATTACCTTTTCCTGATTATGTTCTGATCGCCAATGCATCTTTGTTTTCTGGCTTCCTATGA

Coding sequence (CDS)

ATGGTTAACATGGGCCGATCAATACTAGACCAACCGAGTTCAAAATCCAACTCACTAAACATGCCCTCGGGTTCCCGAATTTCCGCTCGTCGAAGATATTCATCCATTCTGTTTCGCGCCAGTCTTCCTGCTGTAAAAACTGCGATCCGTTTCTCATTTATACTTCCTGATGCATTACCTTTTCCTGATTATGTTCTGATCGCCAATGCATCTTTGTTTTCTGGCTTCCTATGA

Protein sequence

MVNMGRSILDQPSSKSNSLNMPSGSRISARRRYSSILFRASLPAVKTAIRFSFILPDALPFPDYVLIANASLFSGFL*
BLAST of Csa6G312570 vs. TrEMBL
Match: A0A0A0KCF4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G312570 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 1.0e-33
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 1

Query: 1  MVNMGRSILDQPSSKSNSLNMPSGSRISARRRYSSILFRASLPAVKTAIRFSFILPDALP 60
          MVNMGRSILDQPSSKSNSLNMPSGSRISARRRYSSILFRASLPAVKTAIRFSFILPDALP
Sbjct: 1  MVNMGRSILDQPSSKSNSLNMPSGSRISARRRYSSILFRASLPAVKTAIRFSFILPDALP 60

Query: 61 FPDYVLIANASLFSGFL 78
          FPDYVLIANASLFSGFL
Sbjct: 61 FPDYVLIANASLFSGFL 77

BLAST of Csa6G312570 vs. NCBI nr
Match: gi|700192201|gb|KGN47405.1| (hypothetical protein Csa_6G312570 [Cucumis sativus])

HSP 1 Score: 150.2 bits (378), Expect = 1.5e-33
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 1

Query: 1  MVNMGRSILDQPSSKSNSLNMPSGSRISARRRYSSILFRASLPAVKTAIRFSFILPDALP 60
          MVNMGRSILDQPSSKSNSLNMPSGSRISARRRYSSILFRASLPAVKTAIRFSFILPDALP
Sbjct: 1  MVNMGRSILDQPSSKSNSLNMPSGSRISARRRYSSILFRASLPAVKTAIRFSFILPDALP 60

Query: 61 FPDYVLIANASLFSGFL 78
          FPDYVLIANASLFSGFL
Sbjct: 61 FPDYVLIANASLFSGFL 77

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KCF4_CUCSA1.0e-33100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G312570 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700192201|gb|KGN47405.1|1.5e-33100.00hypothetical protein Csa_6G312570 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU132248cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G312570.1Csa6G312570.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU132248CU132248transcribed_cluster


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa6G312570CSPI06G17240Wild cucumber (PI 183967)cpicuB313
The following gene(s) are paralogous to this gene:

None