Csa6G303800 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G303800
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionGlutamate receptor; contains IPR001828 (Extracellular ligand-binding receptor)
LocationChr6 : 14591112 .. 14591474 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAACTAATACATGATAGCAAGGTAGAAGCCATTTTAGGACCAGAAAGTTCATCACAAGCATACTTCATTGTGCAGCTTGGTGACAAAGCTGAGGTCCCTATAATTTCATTTGCACCAAAAATTTCCACTCTCTCTTATCTCAAATTTTCATACTTTTTCCGAGTCACCCAAAATCTCTCCTCCCAGGTTTACGCCATTAGTGACATCCTTAAAGTTTTCGGGTTGAGGGAAATCATTGCCGTCTACGAAGACAATAAGTTTGGAAAATGGATCGTTGCAAATCTCATTGACTCTTTGCATGTAGGTGCAAATAAGAGAAAGGAACATGTAATATACACACCATATATATACAAGGACTAA

mRNA sequence

ATGGAACTAATACATGATAGCAAGGTAGAAGCCATTTTAGGACCAGAAAGTTCATCACAAGCATACTTCATTGTGCAGCTTGGTGACAAAGCTGAGGTCCCTATAATTTCATTTGCACCAAAAATTTCCACTCTCTCTTATCTCAAATTTTCATACTTTTTCCGAGTCACCCAAAATCTCTCCTCCCAGGTTTACGCCATTAGTGACATCCTTAAAGTTTTCGGGTTGAGGGAAATCATTGCCGTCTACGAAGACAATAAGTTTGGAAAATGGATCGTTGCAAATCTCATTGACTCTTTGCATGTAGGTGCAAATAAGAGAAAGGAACATGTAATATACACACCATATATATACAAGGACTAA

Coding sequence (CDS)

ATGGAACTAATACATGATAGCAAGGTAGAAGCCATTTTAGGACCAGAAAGTTCATCACAAGCATACTTCATTGTGCAGCTTGGTGACAAAGCTGAGGTCCCTATAATTTCATTTGCACCAAAAATTTCCACTCTCTCTTATCTCAAATTTTCATACTTTTTCCGAGTCACCCAAAATCTCTCCTCCCAGGTTTACGCCATTAGTGACATCCTTAAAGTTTTCGGGTTGAGGGAAATCATTGCCGTCTACGAAGACAATAAGTTTGGAAAATGGATCGTTGCAAATCTCATTGACTCTTTGCATGTAGGTGCAAATAAGAGAAAGGAACATGTAATATACACACCATATATATACAAGGACTAA

Protein sequence

MELIHDSKVEAILGPESSSQAYFIVQLGDKAEVPIISFAPKISTLSYLKFSYFFRVTQNLSSQVYAISDILKVFGLREIIAVYEDNKFGKWIVANLIDSLHVGANKRKEHVIYTPYIYKD*
Homology
[Close]
BLAST of Csa6G303800 vs. Swiss-Prot
Match: GLR22_ARATH (Glutamate receptor 2.2 OS=Arabidopsis thaliana GN=GLR2.2 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 3.8e-20
Identity = 47/100 (47.00%), Postives = 71/100 (71.00%), Query Frame = 1 

Query: 1   MELIHDSKVEAILGPESSSQAYFIVQLGDKAEVPIISFAPKISTLSYLKFSYFFRVTQNL 60
           ++LI + +V+AILGP +S QA+F++++G K+ VP++S++    +L+ L+  YFFR T   
Sbjct: 89  IDLIKNKQVKAILGPWTSMQAHFLIEIGQKSRVPVVSYSATSPSLTSLRSPYFFRATYED 148

Query: 61  SSQVYAISDILKVFGLREIIAVYEDNKFGKWIVANLIDSL 101
           SSQV+AI  I+K+FG RE++ VY DN FG+ I+  L DSL
Sbjct: 149 SSQVHAIKAIIKLFGWREVVPVYIDNTFGEGIMPRLTDSL 188

[Close]
BLAST of Csa6G303800 vs. Swiss-Prot
Match: GLR24_ARATH (Glutamate receptor 2.4 OS=Arabidopsis thaliana GN=GLR2.4 PE=2 SV=2)

HSP 1 Score: 98.6 bits (244), Expect = 5.0e-20
Identity = 49/100 (49.00%), Postives = 71/100 (71.00%), Query Frame = 1 

Query: 1   MELIHDSKVEAILGPESSSQAYFIVQLGDKAEVPIISFAPKISTLSYLKFSYFFRVTQNL 60
           ++LI + +V+AILGP ++ QA F++++G K++VPIISF+     L   +  YFFR T + 
Sbjct: 89  LDLIKNKEVKAILGPRTTMQASFVIEVGQKSQVPIISFSATSPFLDSGRSPYFFRSTYDD 148

Query: 61  SSQVYAISDILKVFGLREIIAVYEDNKFGKWIVANLIDSL 101
           SSQV AIS+I+KVFG RE++ VYE+N FG+ I+  L D+L
Sbjct: 149 SSQVQAISEIIKVFGWREVVPVYENNAFGEGIMPGLTDAL 188

[Close]
BLAST of Csa6G303800 vs. Swiss-Prot
Match: GLR21_ARATH (Glutamate receptor 2.1 OS=Arabidopsis thaliana GN=GLR2.1 PE=2 SV=2)

HSP 1 Score: 93.6 bits (231), Expect = 1.6e-18
Identity = 44/100 (44.00%), Postives = 72/100 (72.00%), Query Frame = 1 

Query: 1   MELIHDSKVEAILGPESSSQAYFIVQLGDKAEVPIISFAPKISTLSYLKFSYFFRVTQNL 60
           ++LI + +V+AILGP +S QA F++++G K++VPI++++    +L+ ++  YFFR T + 
Sbjct: 89  LDLITNKEVKAILGPWTSMQAQFMIEMGQKSQVPIVTYSATSPSLASIRSQYFFRATYDD 148

Query: 61  SSQVYAISDILKVFGLREIIAVYEDNKFGKWIVANLIDSL 101
           SSQV+AI +I+K+FG RE+  VY D+ FG+ I+  L D L
Sbjct: 149 SSQVHAIKEIIKLFGWREVAPVYVDDTFGEGIMPRLTDVL 188

[Close]
BLAST of Csa6G303800 vs. Swiss-Prot
Match: GLR23_ARATH (Glutamate receptor 2.3 OS=Arabidopsis thaliana GN=GLR2.3 PE=2 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.8e-17
Identity = 44/100 (44.00%), Postives = 66/100 (66.00%), Query Frame = 1 

Query: 1   MELIHDSKVEAILGPESSSQAYFIVQLGDKAEVPIISFAPKISTLSYLKFSYFFRVTQNL 60
           ++LI + +V+AILGP +S QA+F++++G K+ VPI+S++     L+ L+  YF R T   
Sbjct: 88  LDLIKNKQVKAILGPWTSMQAHFLIEIGQKSRVPIVSYSATSPILTSLRSPYFLRATYED 147

Query: 61  SSQVYAISDILKVFGLREIIAVYEDNKFGKWIVANLIDSL 101
           S QV  I  I+K+FG RE++ VY DN FG+ I+  L D+L
Sbjct: 148 SFQVQPIKAIIKLFGWREVVPVYIDNTFGEGIMPRLTDAL 187

[Close]
BLAST of Csa6G303800 vs. Swiss-Prot
Match: GLR27_ARATH (Glutamate receptor 2.7 OS=Arabidopsis thaliana GN=GLR2.7 PE=2 SV=3)

HSP 1 Score: 88.6 bits (218), Expect = 5.1e-17
Identity = 44/100 (44.00%), Postives = 67/100 (67.00%), Query Frame = 1 

Query: 1   MELIHDSKVEAILGPESSSQAYFIVQLGDKAEVPIISFAPKISTLSYLKFSYFFRVTQNL 60
           ++LI + +V AI+GP +S QA F+++L DK++VP I+F+     L+ +   YF R T + 
Sbjct: 96  LDLIKNEQVSAIIGPRTSMQAEFMIRLADKSQVPTITFSATCPLLTSINSPYFVRATLDD 155

Query: 61  SSQVYAISDILKVFGLREIIAVYEDNKFGKWIVANLIDSL 101
           SSQV AI+ I+K FG R ++A+Y DN+FG+ I+  L D+L
Sbjct: 156 SSQVKAIAAIVKSFGWRNVVAIYVDNEFGEGILPLLTDAL 195

[Close]
BLAST of Csa6G303800 vs. TrEMBL
Match: A0A0A0KCB4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G303800 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 4.5e-60
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 1 

Query: 1   MELIHDSKVEAILGPESSSQAYFIVQLGDKAEVPIISFAPKISTLSYLKFSYFFRVTQNL 60
           MELIHDSKVEAILGPESSSQAYFIVQLGDKAEVPIISFAPKISTLSYLKFSYFFRVTQNL
Sbjct: 1   MELIHDSKVEAILGPESSSQAYFIVQLGDKAEVPIISFAPKISTLSYLKFSYFFRVTQNL 60

Query: 61  SSQVYAISDILKVFGLREIIAVYEDNKFGKWIVANLIDSLHVGANKRKEHVIYTPYIYKD 120
           SSQVYAISDILKVFGLREIIAVYEDNKFGKWIVANLIDSLHVGANKRKEHVIYTPYIYKD
Sbjct: 61  SSQVYAISDILKVFGLREIIAVYEDNKFGKWIVANLIDSLHVGANKRKEHVIYTPYIYKD 120

[Close]
BLAST of Csa6G303800 vs. TrEMBL
Match: A0A0A0KEY0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G308930 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 3.2e-42
Identity = 93/114 (81.58%), Postives = 100/114 (87.72%), Query Frame = 1 

Query: 1   MELIHDSKVEAILGPESSSQAYFIVQLGDKAEVPIISFAPKISTLSYLKFSYFFRVTQNL 60
           MELI DSKVEAILGPESSSQAYFIVQLGDKAEVPIISFAPKISTLSYLK SYFFRV QN 
Sbjct: 1   MELIQDSKVEAILGPESSSQAYFIVQLGDKAEVPIISFAPKISTLSYLKSSYFFRVAQNR 60

Query: 61  SSQVYAISDILKVFGLREIIAVYEDNKFGKWIVANLIDSLHVGANKRKEHVIYT 115
           SSQVYAISDILK FGLREIIA+YEDN+F KWIVANLID+L     + + ++I T
Sbjct: 61  SSQVYAISDILKAFGLREIIAIYEDNEFAKWIVANLIDALQDIKGRVRRNIIDT 114

[Close]
BLAST of Csa6G303800 vs. TrEMBL
Match: M5XJN6_PRUPE (Glutamate receptor OS=Prunus persica GN=PRUPE_ppa016908mg PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.6e-20
Identity = 51/101 (50.50%), Postives = 76/101 (75.25%), Query Frame = 1 

Query: 1   MELIHDSKVEAILGPESSSQAYFIVQLGDKAEVPIISFAPKISTLSYLKFSYFFRVTQNL 60
           ++LI + +V+AI+GP SS QA F++ LGDKA+VPIISF+    +L+ ++ SYFFR  QN 
Sbjct: 94  LDLIKNVQVQAIIGPTSSMQANFVIDLGDKAKVPIISFSATSPSLTSIRSSYFFRAAQND 153

Query: 61  SSQVYAISDILKVFGLREIIAVYEDNKFGKWIVANLIDSLH 102
           SSQV AIS I++ FG R  + +Y DN+FG+ ++ +L+D+LH
Sbjct: 154 SSQVKAISAIVQAFGWRRAVPIYVDNEFGEGVLPSLVDALH 194

[Close]
BLAST of Csa6G303800 vs. TrEMBL
Match: A0A059CQV4_EUCGR (Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_C019082 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 3.8e-19
Identity = 49/100 (49.00%), Postives = 75/100 (75.00%), Query Frame = 1 

Query: 1   MELIHDSKVEAILGPESSSQAYFIVQLGDKAEVPIISFAPKISTLSYLKFSYFFRVTQNL 60
           ++LI + +V+AI+GPE+S QA FI+ LG+K+ VPIISF+    +LS ++  YF R TQN 
Sbjct: 28  LDLIKNKQVQAIIGPEASLQADFIIDLGNKSHVPIISFSATSPSLSSIRSPYFIRATQND 87

Query: 61  SSQVYAISDILKVFGLREIIAVYEDNKFGKWIVANLIDSL 101
           SSQV AIS +++ FG +E++ +Y DN+FG+ I+ +L D+L
Sbjct: 88  SSQVNAISAVIQAFGWKELVLIYVDNQFGEGIIPSLADAL 127

[Close]
BLAST of Csa6G303800 vs. TrEMBL
Match: A0A0A0KGS5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G361290 PE=3 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 5.0e-19
Identity = 48/100 (48.00%), Postives = 74/100 (74.00%), Query Frame = 1 

Query: 1   MELIHDSKVEAILGPESSSQAYFIVQLGDKAEVPIISFAPKISTLSYLKFSYFFRVTQNL 60
           ++LI ++KV AILGP +S QA F+++LG KA VPI++F      L+ L+  YFFR+TQN 
Sbjct: 97  LDLIKNNKVHAILGPTTSMQANFVIELGQKAHVPILTFTASSPALASLRSPYFFRLTQND 156

Query: 61  SSQVYAISDILKVFGLREIIAVYEDNKFGKWIVANLIDSL 101
           S+QV AISD++K +  R+++ +YED++FG  ++  LID+L
Sbjct: 157 SAQVVAISDLVKSYSWRQVVPIYEDDEFGDGMLPYLIDAL 196

[Close]
BLAST of Csa6G303800 vs. TAIR10
Match: AT2G24720.1 (AT2G24720.1 glutamate receptor 2.2)

HSP 1 Score: 99.0 bits (245), Expect = 2.1e-21
Identity = 47/100 (47.00%), Postives = 71/100 (71.00%), Query Frame = 1 

Query: 1   MELIHDSKVEAILGPESSSQAYFIVQLGDKAEVPIISFAPKISTLSYLKFSYFFRVTQNL 60
           ++LI + +V+AILGP +S QA+F++++G K+ VP++S++    +L+ L+  YFFR T   
Sbjct: 89  IDLIKNKQVKAILGPWTSMQAHFLIEIGQKSRVPVVSYSATSPSLTSLRSPYFFRATYED 148

Query: 61  SSQVYAISDILKVFGLREIIAVYEDNKFGKWIVANLIDSL 101
           SSQV+AI  I+K+FG RE++ VY DN FG+ I+  L DSL
Sbjct: 149 SSQVHAIKAIIKLFGWREVVPVYIDNTFGEGIMPRLTDSL 188

[Close]
BLAST of Csa6G303800 vs. TAIR10
Match: AT4G31710.1 (AT4G31710.1 glutamate receptor 2.4)

HSP 1 Score: 98.6 bits (244), Expect = 2.8e-21
Identity = 49/100 (49.00%), Postives = 71/100 (71.00%), Query Frame = 1 

Query: 1   MELIHDSKVEAILGPESSSQAYFIVQLGDKAEVPIISFAPKISTLSYLKFSYFFRVTQNL 60
           ++LI + +V+AILGP ++ QA F++++G K++VPIISF+     L   +  YFFR T + 
Sbjct: 112 LDLIKNKEVKAILGPRTTMQASFVIEVGQKSQVPIISFSATSPFLDSGRSPYFFRSTYDD 171

Query: 61  SSQVYAISDILKVFGLREIIAVYEDNKFGKWIVANLIDSL 101
           SSQV AIS+I+KVFG RE++ VYE+N FG+ I+  L D+L
Sbjct: 172 SSQVQAISEIIKVFGWREVVPVYENNAFGEGIMPGLTDAL 211

[Close]
BLAST of Csa6G303800 vs. TAIR10
Match: AT5G27100.1 (AT5G27100.1 glutamate receptor 2.1)

HSP 1 Score: 93.6 bits (231), Expect = 9.0e-20
Identity = 44/100 (44.00%), Postives = 72/100 (72.00%), Query Frame = 1 

Query: 1   MELIHDSKVEAILGPESSSQAYFIVQLGDKAEVPIISFAPKISTLSYLKFSYFFRVTQNL 60
           ++LI + +V+AILGP +S QA F++++G K++VPI++++    +L+ ++  YFFR T + 
Sbjct: 89  LDLITNKEVKAILGPWTSMQAQFMIEMGQKSQVPIVTYSATSPSLASIRSQYFFRATYDD 148

Query: 61  SSQVYAISDILKVFGLREIIAVYEDNKFGKWIVANLIDSL 101
           SSQV+AI +I+K+FG RE+  VY D+ FG+ I+  L D L
Sbjct: 149 SSQVHAIKEIIKLFGWREVAPVYVDDTFGEGIMPRLTDVL 188

[Close]
BLAST of Csa6G303800 vs. TAIR10
Match: AT2G24710.1 (AT2G24710.1 glutamate receptor 2.3)

HSP 1 Score: 90.1 bits (222), Expect = 1.0e-18
Identity = 44/100 (44.00%), Postives = 66/100 (66.00%), Query Frame = 1 

Query: 1   MELIHDSKVEAILGPESSSQAYFIVQLGDKAEVPIISFAPKISTLSYLKFSYFFRVTQNL 60
           ++LI + +V+AILGP +S QA+F++++G K+ VPI+S++     L+ L+  YF R T   
Sbjct: 88  LDLIKNKQVKAILGPWTSMQAHFLIEIGQKSRVPIVSYSATSPILTSLRSPYFLRATYED 147

Query: 61  SSQVYAISDILKVFGLREIIAVYEDNKFGKWIVANLIDSL 101
           S QV  I  I+K+FG RE++ VY DN FG+ I+  L D+L
Sbjct: 148 SFQVQPIKAIIKLFGWREVVPVYIDNTFGEGIMPRLTDAL 187

[Close]
BLAST of Csa6G303800 vs. TAIR10
Match: AT2G29120.1 (AT2G29120.1 glutamate receptor 2.7)

HSP 1 Score: 88.6 bits (218), Expect = 2.9e-18
Identity = 44/100 (44.00%), Postives = 67/100 (67.00%), Query Frame = 1 

Query: 1   MELIHDSKVEAILGPESSSQAYFIVQLGDKAEVPIISFAPKISTLSYLKFSYFFRVTQNL 60
           ++LI + +V AI+GP +S QA F+++L DK++VP I+F+     L+ +   YF R T + 
Sbjct: 96  LDLIKNEQVSAIIGPRTSMQAEFMIRLADKSQVPTITFSATCPLLTSINSPYFVRATLDD 155

Query: 61  SSQVYAISDILKVFGLREIIAVYEDNKFGKWIVANLIDSL 101
           SSQV AI+ I+K FG R ++A+Y DN+FG+ I+  L D+L
Sbjct: 156 SSQVKAIAAIVKSFGWRNVVAIYVDNEFGEGILPLLTDAL 195

[Close]
BLAST of Csa6G303800 vs. NCBI nr
Match: gi|700192161|gb|KGN47365.1| (hypothetical protein Csa_6G303800 [Cucumis sativus])

HSP 1 Score: 238.4 bits (607), Expect = 6.4e-60
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 1 

Query: 1   MELIHDSKVEAILGPESSSQAYFIVQLGDKAEVPIISFAPKISTLSYLKFSYFFRVTQNL 60
           MELIHDSKVEAILGPESSSQAYFIVQLGDKAEVPIISFAPKISTLSYLKFSYFFRVTQNL
Sbjct: 1   MELIHDSKVEAILGPESSSQAYFIVQLGDKAEVPIISFAPKISTLSYLKFSYFFRVTQNL 60

Query: 61  SSQVYAISDILKVFGLREIIAVYEDNKFGKWIVANLIDSLHVGANKRKEHVIYTPYIYKD 120
           SSQVYAISDILKVFGLREIIAVYEDNKFGKWIVANLIDSLHVGANKRKEHVIYTPYIYKD
Sbjct: 61  SSQVYAISDILKVFGLREIIAVYEDNKFGKWIVANLIDSLHVGANKRKEHVIYTPYIYKD 120

[Close]
BLAST of Csa6G303800 vs. NCBI nr
Match: gi|700192180|gb|KGN47384.1| (hypothetical protein Csa_6G308930 [Cucumis sativus])

HSP 1 Score: 179.1 bits (453), Expect = 4.6e-42
Identity = 93/114 (81.58%), Postives = 100/114 (87.72%), Query Frame = 1 

Query: 1   MELIHDSKVEAILGPESSSQAYFIVQLGDKAEVPIISFAPKISTLSYLKFSYFFRVTQNL 60
           MELI DSKVEAILGPESSSQAYFIVQLGDKAEVPIISFAPKISTLSYLK SYFFRV QN 
Sbjct: 1   MELIQDSKVEAILGPESSSQAYFIVQLGDKAEVPIISFAPKISTLSYLKSSYFFRVAQNR 60

Query: 61  SSQVYAISDILKVFGLREIIAVYEDNKFGKWIVANLIDSLHVGANKRKEHVIYT 115
           SSQVYAISDILK FGLREIIA+YEDN+F KWIVANLID+L     + + ++I T
Sbjct: 61  SSQVYAISDILKAFGLREIIAIYEDNEFAKWIVANLIDALQDIKGRVRRNIIDT 114

[Close]
BLAST of Csa6G303800 vs. NCBI nr
Match: gi|596120240|ref|XP_007221769.1| (hypothetical protein PRUPE_ppb024583mg [Prunus persica])

HSP 1 Score: 107.1 bits (266), Expect = 2.2e-20
Identity = 50/100 (50.00%), Postives = 77/100 (77.00%), Query Frame = 1 

Query: 1   MELIHDSKVEAILGPESSSQAYFIVQLGDKAEVPIISFAPKISTLSYLKFSYFFRVTQNL 60
           ++LI + +V+AILGP+SS QA F+++LGDKA+VPIISF+    +L+ ++ SYFFR  QN 
Sbjct: 95  LDLIKNDQVQAILGPKSSMQANFVIELGDKAQVPIISFSATSPSLTSIRSSYFFRAAQND 154

Query: 61  SSQVYAISDILKVFGLREIIAVYEDNKFGKWIVANLIDSL 101
           SSQV AIS +++ FG RE + +Y DN++G+ ++  L+D+L
Sbjct: 155 SSQVKAISAVVQAFGWREAVPIYIDNEYGQGVIPYLVDAL 194

[Close]
BLAST of Csa6G303800 vs. NCBI nr
Match: gi|596270040|ref|XP_007225088.1| (hypothetical protein PRUPE_ppa016908mg [Prunus persica])

HSP 1 Score: 107.1 bits (266), Expect = 2.2e-20
Identity = 51/101 (50.50%), Postives = 76/101 (75.25%), Query Frame = 1 

Query: 1   MELIHDSKVEAILGPESSSQAYFIVQLGDKAEVPIISFAPKISTLSYLKFSYFFRVTQNL 60
           ++LI + +V+AI+GP SS QA F++ LGDKA+VPIISF+    +L+ ++ SYFFR  QN 
Sbjct: 94  LDLIKNVQVQAIIGPTSSMQANFVIDLGDKAKVPIISFSATSPSLTSIRSSYFFRAAQND 153

Query: 61  SSQVYAISDILKVFGLREIIAVYEDNKFGKWIVANLIDSLH 102
           SSQV AIS I++ FG R  + +Y DN+FG+ ++ +L+D+LH
Sbjct: 154 SSQVKAISAIVQAFGWRRAVPIYVDNEFGEGVLPSLVDALH 194

[Close]
BLAST of Csa6G303800 vs. NCBI nr
Match: gi|596290161|ref|XP_007226136.1| (hypothetical protein PRUPE_ppa014659mg [Prunus persica])

HSP 1 Score: 106.7 bits (265), Expect = 2.9e-20
Identity = 50/100 (50.00%), Postives = 77/100 (77.00%), Query Frame = 1 

Query: 1   MELIHDSKVEAILGPESSSQAYFIVQLGDKAEVPIISFAPKISTLSYLKFSYFFRVTQNL 60
           ++LI + +V+AI+GPE+S QA F++ LG+KA+VPIIS++    TL+ ++ SYFFR  QN 
Sbjct: 93  LDLIKNVQVQAIIGPETSMQANFVISLGNKAQVPIISYSATSPTLTSIRSSYFFRAAQND 152

Query: 61  SSQVYAISDILKVFGLREIIAVYEDNKFGKWIVANLIDSL 101
           SSQV A+S I++ FG RE++A+Y DN FG+ ++ +L D+L
Sbjct: 153 SSQVKAMSAIIQAFGWREVVAIYVDNAFGEGVIPSLSDAL 192

The following BLAST results are available for this feature:
BLAST of Csa6G303800 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GLR22_ARATH3.8e-2047.00Glutamate receptor 2.2 OS=Arabidopsis thaliana GN=GLR2.2 PE=2 SV=1[more]
GLR24_ARATH5.0e-2049.00Glutamate receptor 2.4 OS=Arabidopsis thaliana GN=GLR2.4 PE=2 SV=2[more]
GLR21_ARATH1.6e-1844.00Glutamate receptor 2.1 OS=Arabidopsis thaliana GN=GLR2.1 PE=2 SV=2[more]
GLR23_ARATH1.8e-1744.00Glutamate receptor 2.3 OS=Arabidopsis thaliana GN=GLR2.3 PE=2 SV=1[more]
GLR27_ARATH5.1e-1744.00Glutamate receptor 2.7 OS=Arabidopsis thaliana GN=GLR2.7 PE=2 SV=3[more]
BLAST of Csa6G303800 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KCB4_CUCSA4.5e-60100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G303800 PE=4 SV=1[more]
A0A0A0KEY0_CUCSA3.2e-4281.58Uncharacterized protein OS=Cucumis sativus GN=Csa_6G308930 PE=4 SV=1[more]
M5XJN6_PRUPE1.6e-2050.50Glutamate receptor OS=Prunus persica GN=PRUPE_ppa016908mg PE=3 SV=1[more]
A0A059CQV4_EUCGR3.8e-1949.00Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_C019082 PE=4... [more]
A0A0A0KGS5_CUCSA5.0e-1948.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G361290 PE=3 SV=1[more]
BLAST of Csa6G303800 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G24720.12.1e-2147.00 glutamate receptor 2.2[more]
AT4G31710.12.8e-2149.00 glutamate receptor 2.4[more]
AT5G27100.19.0e-2044.00 glutamate receptor 2.1[more]
AT2G24710.11.0e-1844.00 glutamate receptor 2.3[more]
AT2G29120.12.9e-1844.00 glutamate receptor 2.7[more]
BLAST of Csa6G303800 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700192161|gb|KGN47365.1|6.4e-60100.00hypothetical protein Csa_6G303800 [Cucumis sativus][more]
gi|700192180|gb|KGN47384.1|4.6e-4281.58hypothetical protein Csa_6G308930 [Cucumis sativus][more]
gi|596120240|ref|XP_007221769.1|2.2e-2050.00hypothetical protein PRUPE_ppb024583mg [Prunus persica][more]
gi|596270040|ref|XP_007225088.1|2.2e-2050.50hypothetical protein PRUPE_ppa016908mg [Prunus persica][more]
gi|596290161|ref|XP_007226136.1|2.9e-2050.00hypothetical protein PRUPE_ppa014659mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001828ANF_lig-bd_rcpt
IPR028082Peripla_BP_I
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
biological_process GO:0006810 transport
biological_process GO:0044699 single-organism process
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004888 transmembrane signaling receptor activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G303800.1Csa6G303800.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001828Receptor, ligand binding regionPFAMPF01094ANF_receptorcoord: 2..100
score: 1.1
IPR028082Periplasmic binding protein-like IunknownSSF53822Periplasmic binding protein-like Icoord: 2..100
score: 1.14
NoneNo IPR availableGENE3DG3DSA:3.40.50.2300coord: 2..99
score: 6.8
NoneNo IPR availablePANTHERPTHR18966IONOTROPIC GLUTAMATE RECEPTORcoord: 2..100
score: 4.1
NoneNo IPR availablePANTHERPTHR18966:SF204GLUTAMATE RECEPTOR 2.5-RELATEDcoord: 2..100
score: 4.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa6G303800CSPI06G16830Wild cucumber (PI 183967)cpicuB313
Csa6G303800CsGy6G016370Cucumber (Gy14) v2cgybcuB281
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa6G303800Cucurbita maxima (Rimu)cmacuB230
Csa6G303800Bottle gourd (USVL1VR-Ls)culsiB440