Csa6G290890 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa6G290890
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Elongation factor 1-alpha, putative; contains IPR009000 (Translation elongation/initiation factor/Ribosomal, beta-barrel), IPR009001 (Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal), IPR027417 (P-loop containing nucleoside triphosphate hydrolase)
Location	Chr6 : 14061398 .. 14062384 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGCCACCACCCCCAAGTACTCCAAGGCAAGGTATGATGAAATTGTCAAGGAAGTTTCTTCCTACCTCAAAAAGGTCGGATACAACCCTGACAAAATCCCCTTTGTTCCCATCTCTGGTTTTGAAGGAGACAACATGATTGAGAGGTCGACCAACCTTGACTGGTACAAGGGTCCAACTCTCCTTGAGGCTCTTGACTTGATCCAGGAGCCCAAGAGGCCCTCAGACAAGCCACTCCGTCTTCCACTTCAGGATGTGTACAAGATCGGTGGTATTGGAACTGTACCAGTTGGTCGTGTTGAGACTGGTGTCCTCAAACCTGGAATGGTGGTCACTTTTGGCCCTTCTGGATTGACCACTGAAGTCAAGTCTGTTGAGATGCACCACGAATCTCTACCCGAGGCCGTTCCTGGTGACAATGTGGGATTCAATGTGAAGAATGTTGCTGTAAAGGATCTCAAGCGTGGTTTCGTCGCTTCCAACTCAAAGGATGACCCTGCCAGGGAGGCTGCCAACTTCACTTCTCAAGTCATTATCATGAACCACCCTGGACAAATTGGCAATGGTTATGCTCCAGTGCTTGATTGCCACACCTCTCATATTGCGGTGAAATTTGCCGAGATTCTAACCAAAATCGACAGGCGATCAGGTAAGGAACTTGAGAAGGAACCCAAGTTCTTAAAGAATGGTGATGCAGGTATGATTAAGATGATTCCCACCAAACCTATGGTGGTGGAAACCTTCTCTCAGTACCCTCCTCTTGGACGTTTCGCCGTAAGAGACATGAGACAGACAGTTGCTGTTGGTGTCATCAAGTCCGTCGAAAAGAAGGATCCAAGTGGTGCTAAGGTTACTAAATCCGCAGCCAAGAAGGGTGGAAAGTGAACCGTATTTACAAAACTTCACACAACTCTCTCTAACTCTAAGGTTTGCAAGCATTACAATCAAAATAAAGAACTGGCAAGTTTTCTTGTTTATGCTTTG

mRNA sequence

ATGGATGCCACCACCCCCAAGTACTCCAAGGCAAGGTATGATGAAATTGTCAAGGAAGTTTCTTCCTACCTCAAAAAGGTCGGATACAACCCTGACAAAATCCCCTTTGTTCCCATCTCTGGTTTTGAAGGAGACAACATGATTGAGAGGTCGACCAACCTTGACTGGTACAAGGGTCCAACTCTCCTTGAGGCTCTTGACTTGATCCAGGAGCCCAAGAGGCCCTCAGACAAGCCACTCCGTCTTCCACTTCAGGATGTGTACAAGATCGGTGGTATTGGAACTGTACCAGTTGGTCGTGTTGAGACTGGTGTCCTCAAACCTGGAATGGTGGTCACTTTTGGCCCTTCTGGATTGACCACTGAAGTCAAGTCTGTTGAGATGCACCACGAATCTCTACCCGAGGCCGTTCCTGGTGACAATGTGGGATTCAATGTGAAGAATGTTGCTGTAAAGGATCTCAAGCGTGGTTTCGTCGCTTCCAACTCAAAGGATGACCCTGCCAGGGAGGCTGCCAACTTCACTTCTCAAGTCATTATCATGAACCACCCTGGACAAATTGGCAATGGTTATGCTCCAGTGCTTGATTGCCACACCTCTCATATTGCGGTGAAATTTGCCGAGATTCTAACCAAAATCGACAGGCGATCAGGTAAGGAACTTGAGAAGGAACCCAAGTTCTTAAAGAATGGTGATGCAGGTATGATTAAGATGATTCCCACCAAACCTATGGTGGTGGAAACCTTCTCTCAGTACCCTCCTCTTGGACGTTTCGCCGTAAGAGACATGAGACAGACAGTTGCTGTTGGTGTCATCAAGTCCGTCGAAAAGAAGGATCCAAGTGGTGCTAAGGTTACTAAATCCGCAGCCAAGAAGGGTGGAAAGTGA

Coding sequence (CDS)

ATGGATGCCACCACCCCCAAGTACTCCAAGGCAAGGTATGATGAAATTGTCAAGGAAGTTTCTTCCTACCTCAAAAAGGTCGGATACAACCCTGACAAAATCCCCTTTGTTCCCATCTCTGGTTTTGAAGGAGACAACATGATTGAGAGGTCGACCAACCTTGACTGGTACAAGGGTCCAACTCTCCTTGAGGCTCTTGACTTGATCCAGGAGCCCAAGAGGCCCTCAGACAAGCCACTCCGTCTTCCACTTCAGGATGTGTACAAGATCGGTGGTATTGGAACTGTACCAGTTGGTCGTGTTGAGACTGGTGTCCTCAAACCTGGAATGGTGGTCACTTTTGGCCCTTCTGGATTGACCACTGAAGTCAAGTCTGTTGAGATGCACCACGAATCTCTACCCGAGGCCGTTCCTGGTGACAATGTGGGATTCAATGTGAAGAATGTTGCTGTAAAGGATCTCAAGCGTGGTTTCGTCGCTTCCAACTCAAAGGATGACCCTGCCAGGGAGGCTGCCAACTTCACTTCTCAAGTCATTATCATGAACCACCCTGGACAAATTGGCAATGGTTATGCTCCAGTGCTTGATTGCCACACCTCTCATATTGCGGTGAAATTTGCCGAGATTCTAACCAAAATCGACAGGCGATCAGGTAAGGAACTTGAGAAGGAACCCAAGTTCTTAAAGAATGGTGATGCAGGTATGATTAAGATGATTCCCACCAAACCTATGGTGGTGGAAACCTTCTCTCAGTACCCTCCTCTTGGACGTTTCGCCGTAAGAGACATGAGACAGACAGTTGCTGTTGGTGTCATCAAGTCCGTCGAAAAGAAGGATCCAAGTGGTGCTAAGGTTACTAAATCCGCAGCCAAGAAGGGTGGAAAGTGA

Protein sequence

MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLIQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHESLPEAVPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKVTKSAAKKGGK*

Homology

[Close]

BLAST of Csa6G290890 vs. Swiss-Prot
Match: EF1A_MANES (Elongation factor 1-alpha OS=Manihot esculenta GN=EF1 PE=3 SV=1)

HSP 1 Score: 575.1 bits (1481), Expect = 4.4e-163
Identity = 284/295 (96.27%), Postives = 288/295 (97.63%), Query Frame = 1


Query: 1   MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 60
           MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP
Sbjct: 155 MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 214

Query: 61  TLLEALDLIQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT 120
           TLLEALD IQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETG+LKPGMVVTFGP+GLT
Sbjct: 215 TLLEALDQIQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFGPTGLT 274

Query: 121 TEVKSVEMHHESLPEAVPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVII 180
           TEVKSVEMHHE+L EA+PGDNVGFNVKNVAVKDLKRG VASNSKDDPA+EAANFTSQVII
Sbjct: 275 TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGIVASNSKDDPAKEAANFTSQVII 334

Query: 181 MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIP 240
           MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAG +KMIP
Sbjct: 335 MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIP 394

Query: 241 TKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKVTKSAAKKGGK 296
           TKPMVVETFS YPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKVTKSAAKKGGK
Sbjct: 395 TKPMVVETFSAYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKVTKSAAKKGGK 449

[Close]

BLAST of Csa6G290890 vs. Swiss-Prot
Match: EF1A_ORYSJ (Elongation factor 1-alpha OS=Oryza sativa subsp. japonica GN=REFA1 PE=2 SV=2)

HSP 1 Score: 565.1 bits (1455), Expect = 4.6e-160
Identity = 277/292 (94.86%), Postives = 287/292 (98.29%), Query Frame = 1


Query: 1   MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 60
           MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP
Sbjct: 155 MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 214

Query: 61  TLLEALDLIQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT 120
           TLLEALD I EPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT
Sbjct: 215 TLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT 274

Query: 121 TEVKSVEMHHESLPEAVPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVII 180
           TEVKSVEMHHE+L EA+PGDNVGFNVKNVAVKDLKRG+VASNSKDDPA+EAA+FTSQVII
Sbjct: 275 TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVII 334

Query: 181 MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIP 240
           MNHPGQIGNGYAPVLDCHTSHIAVKFAE++TKIDRRSGKELEKEPKFLKNGDAGM+KMIP
Sbjct: 335 MNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIP 394

Query: 241 TKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKVTKSAAKK 293
           TKPMVVETFS+YPPLGRFAVRDMRQTVAVGVIK+VEKKDP+GAKVTK+AAKK
Sbjct: 395 TKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNVEKKDPTGAKVTKAAAKK 446

[Close]

BLAST of Csa6G290890 vs. Swiss-Prot
Match: EF1A_MAIZE (Elongation factor 1-alpha OS=Zea mays GN=EF1A PE=3 SV=1)

HSP 1 Score: 561.6 bits (1446), Expect = 5.1e-159
Identity = 275/292 (94.18%), Postives = 286/292 (97.95%), Query Frame = 1


Query: 1   MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 60
           MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKI FVPISGFEGDNMIERSTNLDWYKGP
Sbjct: 155 MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIHFVPISGFEGDNMIERSTNLDWYKGP 214

Query: 61  TLLEALDLIQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT 120
           TLLEALDLI EPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGV+KPGMVVTFGP+GLT
Sbjct: 215 TLLEALDLINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLT 274

Query: 121 TEVKSVEMHHESLPEAVPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVII 180
           TEVKSVEMHHE+L EA+PGDNVGFNVKNVAVKDLKRG+VAS SKDDPA+EAA+FTSQVII
Sbjct: 275 TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASGSKDDPAKEAASFTSQVII 334

Query: 181 MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIP 240
           MNHPGQIGNGYAPVLDCHTSHIAVKFAE++TKIDRRSGKELEKEPKFLKNGDAGM+KM+P
Sbjct: 335 MNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMVP 394

Query: 241 TKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKVTKSAAKK 293
           TKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDP+GAKVTK+AAKK
Sbjct: 395 TKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTGAKVTKAAAKK 446

[Close]

BLAST of Csa6G290890 vs. Swiss-Prot
Match: EF1A3_ARATH (Elongation factor 1-alpha 3 OS=Arabidopsis thaliana GN=A3 PE=1 SV=2)

HSP 1 Score: 559.7 bits (1441), Expect = 1.9e-158
Identity = 273/295 (92.54%), Postives = 285/295 (96.61%), Query Frame = 1


Query: 1   MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 60
           MDATTPKYSKARYDEI+KEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP
Sbjct: 155 MDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 214

Query: 61  TLLEALDLIQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT 120
           TLLEALD I EPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETG++KPGMVVTF P+GLT
Sbjct: 215 TLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLT 274

Query: 121 TEVKSVEMHHESLPEAVPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVII 180
           TEVKSVEMHHESL EA+PGDNVGFNVKNVAVKDLKRG+VASNSKDDPA+ AANFTSQVII
Sbjct: 275 TEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVII 334

Query: 181 MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIP 240
           MNHPGQIGNGYAPVLDCHTSHIAVKF+EILTKIDRRSGKE+EKEPKFLKNGDAGM+KM P
Sbjct: 335 MNHPGQIGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTP 394

Query: 241 TKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKVTKSAAKKGGK 296
           TKPMVVETFS+YPPLGRFAVRDMRQTVAVGVIKSV+KKDP+GAKVTK+A KKG K
Sbjct: 395 TKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPTGAKVTKAAVKKGAK 449

[Close]

BLAST of Csa6G290890 vs. Swiss-Prot
Match: EF1A1_ARATH (Elongation factor 1-alpha 1 OS=Arabidopsis thaliana GN=A1 PE=1 SV=1)

HSP 1 Score: 559.7 bits (1441), Expect = 1.9e-158
Identity = 273/295 (92.54%), Postives = 285/295 (96.61%), Query Frame = 1


Query: 1   MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 60
           MDATTPKYSKARYDEI+KEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP
Sbjct: 155 MDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 214

Query: 61  TLLEALDLIQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT 120
           TLLEALD I EPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETG++KPGMVVTF P+GLT
Sbjct: 215 TLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLT 274

Query: 121 TEVKSVEMHHESLPEAVPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVII 180
           TEVKSVEMHHESL EA+PGDNVGFNVKNVAVKDLKRG+VASNSKDDPA+ AANFTSQVII
Sbjct: 275 TEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVII 334

Query: 181 MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIP 240
           MNHPGQIGNGYAPVLDCHTSHIAVKF+EILTKIDRRSGKE+EKEPKFLKNGDAGM+KM P
Sbjct: 335 MNHPGQIGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTP 394

Query: 241 TKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKVTKSAAKKGGK 296
           TKPMVVETFS+YPPLGRFAVRDMRQTVAVGVIKSV+KKDP+GAKVTK+A KKG K
Sbjct: 395 TKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPTGAKVTKAAVKKGAK 449

[Close]

BLAST of Csa6G290890 vs. TrEMBL
Match: V5IV18_HEVBR (Elongation factor 1-alpha OS=Hevea brasiliensis GN=EF1A2 PE=2 SV=1)

HSP 1 Score: 570.1 bits (1468), Expect = 1.6e-159
Identity = 282/295 (95.59%), Postives = 289/295 (97.97%), Query Frame = 1


Query: 1   MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 60
           MDATTPKYSKARYDEIVKEV+ YLKKVGYNP+KIPFVPISGFEGDNMIERSTNLDWYKGP
Sbjct: 155 MDATTPKYSKARYDEIVKEVALYLKKVGYNPEKIPFVPISGFEGDNMIERSTNLDWYKGP 214

Query: 61  TLLEALDLIQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT 120
           TLLEALDLI EPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTF PSGLT
Sbjct: 215 TLLEALDLILEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPSGLT 274

Query: 121 TEVKSVEMHHESLPEAVPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVII 180
           TEVKSVEMHHE+L EA+PGDNVGFNVKNVAVKDLKRGFVASNSKDDPA+EAANFTSQVII
Sbjct: 275 TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSQVII 334

Query: 181 MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIP 240
           MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAG +KMIP
Sbjct: 335 MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIP 394

Query: 241 TKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKVTKSAAKKGGK 296
           TKPMVVETFS YPPLGRFAVRDMRQTVAVGVIKSVEKKDP+GAKVTKSAAKKGGK
Sbjct: 395 TKPMVVETFSTYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTGAKVTKSAAKKGGK 449

[Close]

BLAST of Csa6G290890 vs. TrEMBL
Match: A0A0A0KS27_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G495940 PE=4 SV=1)

HSP 1 Score: 567.4 bits (1461), Expect = 1.0e-158
Identity = 279/295 (94.58%), Postives = 289/295 (97.97%), Query Frame = 1


Query: 1   MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 60
           MDATTPKYSK+RYDEIVKEVSSYLKKVGYNP+KIPFVPISGFEGDNMIERSTNLDWYKGP
Sbjct: 50  MDATTPKYSKSRYDEIVKEVSSYLKKVGYNPEKIPFVPISGFEGDNMIERSTNLDWYKGP 109

Query: 61  TLLEALDLIQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT 120
           TLLEALDLIQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETG++KPGMVVTF PSGLT
Sbjct: 110 TLLEALDLIQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPSGLT 169

Query: 121 TEVKSVEMHHESLPEAVPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVII 180
           TEVKSVEMHHE+L EA+PGDNVGFNVKNVAVKDLKRG+VASNSKDDPA+EAANFTSQVII
Sbjct: 170 TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTSQVII 229

Query: 181 MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIP 240
           MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAG +KMIP
Sbjct: 230 MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIP 289

Query: 241 TKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKVTKSAAKKGGK 296
           TKPMVVETFS YPPLGRFAVRDMRQTVAVGVIK+VEKKD SGAKVTKSAAKK GK
Sbjct: 290 TKPMVVETFSAYPPLGRFAVRDMRQTVAVGVIKAVEKKDASGAKVTKSAAKKSGK 344

[Close]

BLAST of Csa6G290890 vs. TrEMBL
Match: A0A0D9Z2R9_9ORYZ (Elongation factor 1-alpha OS=Oryza glumipatula PE=3 SV=1)

HSP 1 Score: 565.1 bits (1455), Expect = 5.1e-158
Identity = 277/292 (94.86%), Postives = 289/292 (98.97%), Query Frame = 1


Query: 1   MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 60
           MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP
Sbjct: 551 MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 610

Query: 61  TLLEALDLIQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT 120
           TLLEALD I EPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT
Sbjct: 611 TLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT 670

Query: 121 TEVKSVEMHHESLPEAVPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVII 180
           TEVKSVEMHHE+L EA+PGDNVGFNVKNVAVKDLKRG+VASNSKDDPA+EAA+FTSQVII
Sbjct: 671 TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVII 730

Query: 181 MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIP 240
           MNHPGQIGNGYAPVLDCHTSHIAVKFAE++TKIDRRSGKELEKEPKFLKNGDAGM+KMIP
Sbjct: 731 MNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIP 790

Query: 241 TKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKVTKSAAKK 293
           TKPMVVETFS+YPPLGRFAVRDMRQTVAVGVIK+VEKKDP+GAKVTK+AAKK
Sbjct: 791 TKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNVEKKDPTGAKVTKAAAKK 842

[Close]

BLAST of Csa6G290890 vs. TrEMBL
Match: A0A0D9Z2R9_9ORYZ (Elongation factor 1-alpha OS=Oryza glumipatula PE=3 SV=1)

HSP 1 Score: 552.7 bits (1423), Expect = 2.6e-154
Identity = 270/285 (94.74%), Postives = 282/285 (98.95%), Query Frame = 1


Query: 1   MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 60
           MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP
Sbjct: 107 MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 166

Query: 61  TLLEALDLIQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT 120
           TLLEALD I EPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT
Sbjct: 167 TLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT 226

Query: 121 TEVKSVEMHHESLPEAVPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVII 180
           TEVKSVEMHHE+L EA+PGDNVGFNVKNVAVKDLKRG+VASNSKDDPA+EAA+FTSQVII
Sbjct: 227 TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVII 286

Query: 181 MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIP 240
           MNHPGQIGNGYAPVLDCHTSHIAVKFAE++TKIDRRSGKELEKEPKFLKNGDAGM+KMIP
Sbjct: 287 MNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIP 346

Query: 241 TKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKV 286
           TKPMVVETFS+YPPLGRFAVRDMRQTVAVGVIK+VEKKDP+GAK+
Sbjct: 347 TKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNVEKKDPTGAKL 391

HSP 2 Score: 565.1 bits (1455), Expect = 5.1e-158
Identity = 277/292 (94.86%), Postives = 289/292 (98.97%), Query Frame = 1


Query: 1   MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 60
           MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP
Sbjct: 168 MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 227

Query: 61  TLLEALDLIQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT 120
           TLLEALD I EPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT
Sbjct: 228 TLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT 287

Query: 121 TEVKSVEMHHESLPEAVPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVII 180
           TEVKSVEMHHE+L EA+PGDNVGFNVKNVAVKDLKRG+VASNSKDDPA+EAA+FTSQVII
Sbjct: 288 TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVII 347

Query: 181 MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIP 240
           MNHPGQIGNGYAPVLDCHTSHIAVKFAE++TKIDRRSGKELEKEPKFLKNGDAGM+KMIP
Sbjct: 348 MNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIP 407

Query: 241 TKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKVTKSAAKK 293
           TKPMVVETFS+YPPLGRFAVRDMRQTVAVGVIK+VEKKDP+GAKVTK+AAKK
Sbjct: 408 TKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNVEKKDPTGAKVTKAAAKK 459

[Close]

BLAST of Csa6G290890 vs. TrEMBL
Match: A0A0D3FEJ1_9ORYZ (Elongation factor 1-alpha OS=Oryza barthii PE=3 SV=1)

HSP 1 Score: 565.1 bits (1455), Expect = 5.1e-158
Identity = 277/292 (94.86%), Postives = 289/292 (98.97%), Query Frame = 1


Query: 1   MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 60
           MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP
Sbjct: 626 MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 685

Query: 61  TLLEALDLIQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT 120
           TLLEALD I EPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT
Sbjct: 686 TLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT 745

Query: 121 TEVKSVEMHHESLPEAVPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVII 180
           TEVKSVEMHHE+L EA+PGDNVGFNVKNVAVKDLKRG+VASNSKDDPA+EAA+FTSQVII
Sbjct: 746 TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVII 805

Query: 181 MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIP 240
           MNHPGQIGNGYAPVLDCHTSHIAVKFAE++TKIDRRSGKELEKEPKFLKNGDAGM+KMIP
Sbjct: 806 MNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIP 865

Query: 241 TKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKVTKSAAKK 293
           TKPMVVETFS+YPPLGRFAVRDMRQTVAVGVIK+VEKKDP+GAKVTK+AAKK
Sbjct: 866 TKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNVEKKDPTGAKVTKAAAKK 917

HSP 2 Score: 564.3 bits (1453), Expect = 8.7e-158
Identity = 276/292 (94.52%), Postives = 288/292 (98.63%), Query Frame = 1


Query: 1   MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 60
           MDATTPKYSKAR+DEIVKEVSSYLKKVGYNPDK+PFVPISGFEGDNMIERSTNLDWYKGP
Sbjct: 155 MDATTPKYSKARFDEIVKEVSSYLKKVGYNPDKVPFVPISGFEGDNMIERSTNLDWYKGP 214

Query: 61  TLLEALDLIQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT 120
           TLL+ALD+I EPKRP+DKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTF PSGLT
Sbjct: 215 TLLDALDMINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPSGLT 274

Query: 121 TEVKSVEMHHESLPEAVPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVII 180
           TEVKSVEMHHE+L EA+PGDNVGFNVKNVAVKDLKRG+VASNSKDDPA+EAANFTSQVII
Sbjct: 275 TEVKSVEMHHEALLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTSQVII 334

Query: 181 MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIP 240
           MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAG +KM+P
Sbjct: 335 MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMVP 394

Query: 241 TKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKVTKSAAKK 293
           TKPMVVETFS+YPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKVTKSAAKK
Sbjct: 395 TKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKVTKSAAKK 446

[Close]

BLAST of Csa6G290890 vs. TAIR10
Match: AT1G07920.1 (AT1G07920.1 GTP binding Elongation factor Tu family protein)

HSP 1 Score: 559.7 bits (1441), Expect = 1.1e-159
Identity = 273/295 (92.54%), Postives = 285/295 (96.61%), Query Frame = 1


Query: 1   MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 60
           MDATTPKYSKARYDEI+KEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP
Sbjct: 155 MDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 214

Query: 61  TLLEALDLIQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT 120
           TLLEALD I EPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETG++KPGMVVTF P+GLT
Sbjct: 215 TLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLT 274

Query: 121 TEVKSVEMHHESLPEAVPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVII 180
           TEVKSVEMHHESL EA+PGDNVGFNVKNVAVKDLKRG+VASNSKDDPA+ AANFTSQVII
Sbjct: 275 TEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVII 334

Query: 181 MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIP 240
           MNHPGQIGNGYAPVLDCHTSHIAVKF+EILTKIDRRSGKE+EKEPKFLKNGDAGM+KM P
Sbjct: 335 MNHPGQIGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTP 394

Query: 241 TKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKVTKSAAKKGGK 296
           TKPMVVETFS+YPPLGRFAVRDMRQTVAVGVIKSV+KKDP+GAKVTK+A KKG K
Sbjct: 395 TKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPTGAKVTKAAVKKGAK 449

[Close]

BLAST of Csa6G290890 vs. TAIR10
Match: AT1G07930.1 (AT1G07930.1 GTP binding Elongation factor Tu family protein)

HSP 1 Score: 559.7 bits (1441), Expect = 1.1e-159
Identity = 273/295 (92.54%), Postives = 285/295 (96.61%), Query Frame = 1


Query: 1   MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 60
           MDATTPKYSKARYDEI+KEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP
Sbjct: 155 MDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 214

Query: 61  TLLEALDLIQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT 120
           TLLEALD I EPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETG++KPGMVVTF P+GLT
Sbjct: 215 TLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLT 274

Query: 121 TEVKSVEMHHESLPEAVPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVII 180
           TEVKSVEMHHESL EA+PGDNVGFNVKNVAVKDLKRG+VASNSKDDPA+ AANFTSQVII
Sbjct: 275 TEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVII 334

Query: 181 MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIP 240
           MNHPGQIGNGYAPVLDCHTSHIAVKF+EILTKIDRRSGKE+EKEPKFLKNGDAGM+KM P
Sbjct: 335 MNHPGQIGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTP 394

Query: 241 TKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKVTKSAAKKGGK 296
           TKPMVVETFS+YPPLGRFAVRDMRQTVAVGVIKSV+KKDP+GAKVTK+A KKG K
Sbjct: 395 TKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPTGAKVTKAAVKKGAK 449

[Close]

BLAST of Csa6G290890 vs. TAIR10
Match: AT1G07940.1 (AT1G07940.1 GTP binding Elongation factor Tu family protein)

HSP 1 Score: 559.7 bits (1441), Expect = 1.1e-159
Identity = 273/295 (92.54%), Postives = 285/295 (96.61%), Query Frame = 1


Query: 1   MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 60
           MDATTPKYSKARYDEI+KEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP
Sbjct: 155 MDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 214

Query: 61  TLLEALDLIQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT 120
           TLLEALD I EPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETG++KPGMVVTF P+GLT
Sbjct: 215 TLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLT 274

Query: 121 TEVKSVEMHHESLPEAVPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVII 180
           TEVKSVEMHHESL EA+PGDNVGFNVKNVAVKDLKRG+VASNSKDDPA+ AANFTSQVII
Sbjct: 275 TEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVII 334

Query: 181 MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIP 240
           MNHPGQIGNGYAPVLDCHTSHIAVKF+EILTKIDRRSGKE+EKEPKFLKNGDAGM+KM P
Sbjct: 335 MNHPGQIGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTP 394

Query: 241 TKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKVTKSAAKKGGK 296
           TKPMVVETFS+YPPLGRFAVRDMRQTVAVGVIKSV+KKDP+GAKVTK+A KKG K
Sbjct: 395 TKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPTGAKVTKAAVKKGAK 449

[Close]

BLAST of Csa6G290890 vs. TAIR10
Match: AT5G60390.1 (AT5G60390.1 GTP binding Elongation factor Tu family protein)

HSP 1 Score: 559.7 bits (1441), Expect = 1.1e-159
Identity = 273/295 (92.54%), Postives = 285/295 (96.61%), Query Frame = 1


Query: 1   MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 60
           MDATTPKYSKARYDEI+KEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP
Sbjct: 155 MDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 214

Query: 61  TLLEALDLIQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT 120
           TLLEALD I EPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETG++KPGMVVTF P+GLT
Sbjct: 215 TLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLT 274

Query: 121 TEVKSVEMHHESLPEAVPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVII 180
           TEVKSVEMHHESL EA+PGDNVGFNVKNVAVKDLKRG+VASNSKDDPA+ AANFTSQVII
Sbjct: 275 TEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVII 334

Query: 181 MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIP 240
           MNHPGQIGNGYAPVLDCHTSHIAVKF+EILTKIDRRSGKE+EKEPKFLKNGDAGM+KM P
Sbjct: 335 MNHPGQIGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTP 394

Query: 241 TKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKVTKSAAKKGGK 296
           TKPMVVETFS+YPPLGRFAVRDMRQTVAVGVIKSV+KKDP+GAKVTK+A KKG K
Sbjct: 395 TKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPTGAKVTKAAVKKGAK 449

[Close]

BLAST of Csa6G290890 vs. TAIR10
Match: AT1G35550.1 (AT1G35550.1 elongation factor Tu C-terminal domain-containing protein)

HSP 1 Score: 174.5 bits (441), Expect = 9.8e-44
Identity = 84/104 (80.77%), Postives = 89/104 (85.58%), Query Frame = 1


Query: 181 MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIP 240
           MNH GQI NGY PVLDCHTSHIAVKF+EILTKID R+G E+EKEPKFLKN +A +I M P
Sbjct: 1   MNHLGQIKNGYTPVLDCHTSHIAVKFSEILTKIDWRTGHEIEKEPKFLKNSEAAIINMTP 60

Query: 241 TKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAK 285
           TKPMVVE +S YPPLGRFA+RDMRQTV VGVIKSV KKDPSGAK
Sbjct: 61  TKPMVVEAYSAYPPLGRFAIRDMRQTVGVGVIKSVVKKDPSGAK 104

[Close]

BLAST of Csa6G290890 vs. NCBI nr
Match: gi|449463655|ref|XP_004149547.1| (PREDICTED: elongation factor 1-alpha [Cucumis sativus])

HSP 1 Score: 592.4 bits (1526), Expect = 4.3e-166
Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 1


Query: 1   MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 60
           MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP
Sbjct: 155 MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 214

Query: 61  TLLEALDLIQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT 120
           TLLEALDLIQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT
Sbjct: 215 TLLEALDLIQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT 274

Query: 121 TEVKSVEMHHESLPEAVPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVII 180
           TEVKSVEMHHESLPEAVPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVII
Sbjct: 275 TEVKSVEMHHESLPEAVPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVII 334

Query: 181 MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIP 240
           MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIP
Sbjct: 335 MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIP 394

Query: 241 TKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKVTKSAAKKGGK 296
           TKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKVTKSAAKKGGK
Sbjct: 395 TKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKVTKSAAKKGGK 449

[Close]

BLAST of Csa6G290890 vs. NCBI nr
Match: gi|700192104|gb|KGN47308.1| (hypothetical protein Csa_6G290890 [Cucumis sativus])

HSP 1 Score: 592.4 bits (1526), Expect = 4.3e-166
Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 1


Query: 1   MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 60
           MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP
Sbjct: 1   MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 60

Query: 61  TLLEALDLIQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT 120
           TLLEALDLIQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT
Sbjct: 61  TLLEALDLIQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT 120

Query: 121 TEVKSVEMHHESLPEAVPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVII 180
           TEVKSVEMHHESLPEAVPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVII
Sbjct: 121 TEVKSVEMHHESLPEAVPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVII 180

Query: 181 MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIP 240
           MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIP
Sbjct: 181 MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIP 240

Query: 241 TKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKVTKSAAKKGGK 296
           TKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKVTKSAAKKGGK
Sbjct: 241 TKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKVTKSAAKKGGK 295

[Close]

BLAST of Csa6G290890 vs. NCBI nr
Match: gi|659127850|ref|XP_008463920.1| (PREDICTED: elongation factor 1-alpha [Cucumis melo])

HSP 1 Score: 584.3 bits (1505), Expect = 1.2e-163
Identity = 290/293 (98.98%), Postives = 292/293 (99.66%), Query Frame = 1


Query: 1   MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 60
           MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP
Sbjct: 155 MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 214

Query: 61  TLLEALDLIQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT 120
           TLLEALDLIQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT
Sbjct: 215 TLLEALDLIQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT 274

Query: 121 TEVKSVEMHHESLPEAVPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVII 180
           TEVKSVEMHHE+LPEAVPGDNVGFNVKNVAVKDLKRGFVASNSKDDPA+EAANFTSQVII
Sbjct: 275 TEVKSVEMHHEALPEAVPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSQVII 334

Query: 181 MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIP 240
           MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIP
Sbjct: 335 MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIP 394

Query: 241 TKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKVTKSAAKKG 294
           TKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKVTKSA KKG
Sbjct: 395 TKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKVTKSAVKKG 447

[Close]

BLAST of Csa6G290890 vs. NCBI nr
Match: gi|743843595|ref|XP_011026991.1| (PREDICTED: elongation factor 1-alpha isoform X1 [Populus euphratica])

HSP 1 Score: 578.6 bits (1490), Expect = 6.4e-162
Identity = 286/295 (96.95%), Postives = 292/295 (98.98%), Query Frame = 1


Query: 1   MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 60
           MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP
Sbjct: 155 MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 214

Query: 61  TLLEALDLIQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT 120
           TLL+ALD IQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETG +KPGMVVTFGP+GLT
Sbjct: 215 TLLDALDQIQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGFIKPGMVVTFGPTGLT 274

Query: 121 TEVKSVEMHHESLPEAVPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVII 180
           TEVKSVEMHHE+L EA+PGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVII
Sbjct: 275 TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVII 334

Query: 181 MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIP 240
           MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIP
Sbjct: 335 MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIP 394

Query: 241 TKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKVTKSAAKKGGK 296
           TKPMVVETFS+YPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKVTKSAAKKGGK
Sbjct: 395 TKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKVTKSAAKKGGK 449

[Close]

BLAST of Csa6G290890 vs. NCBI nr
Match: gi|743843599|ref|XP_011026992.1| (PREDICTED: elongation factor 1-alpha isoform X2 [Populus euphratica])

HSP 1 Score: 578.6 bits (1490), Expect = 6.4e-162
Identity = 286/295 (96.95%), Postives = 292/295 (98.98%), Query Frame = 1


Query: 1   MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 60
           MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP
Sbjct: 155 MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 214

Query: 61  TLLEALDLIQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT 120
           TLL+ALD IQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETG +KPGMVVTFGP+GLT
Sbjct: 215 TLLDALDQIQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGFIKPGMVVTFGPTGLT 274

Query: 121 TEVKSVEMHHESLPEAVPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVII 180
           TEVKSVEMHHE+L EA+PGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVII
Sbjct: 275 TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVII 334

Query: 181 MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIP 240
           MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIP
Sbjct: 335 MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIP 394

Query: 241 TKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKVTKSAAKKGGK 296
           TKPMVVETFS+YPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKVTKSAAKKGGK
Sbjct: 395 TKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKVTKSAAKKGGK 449

The following BLAST results are available for this feature:

BLAST of Csa6G290890 vs. Swiss-Prot


Match Name	E-value	Identity	Description
EF1A_MANES	4.4e-163	96.27	Elongation factor 1-alpha OS=Manihot esculenta GN=EF1 PE=3 SV=1	[more]
EF1A_ORYSJ	4.6e-160	94.86	Elongation factor 1-alpha OS=Oryza sativa subsp. japonica GN=REFA1 PE=2 SV=2	[more]
EF1A_MAIZE	5.1e-159	94.18	Elongation factor 1-alpha OS=Zea mays GN=EF1A PE=3 SV=1	[more]
EF1A3_ARATH	1.9e-158	92.54	Elongation factor 1-alpha 3 OS=Arabidopsis thaliana GN=A3 PE=1 SV=2	[more]
EF1A1_ARATH	1.9e-158	92.54	Elongation factor 1-alpha 1 OS=Arabidopsis thaliana GN=A1 PE=1 SV=1	[more]

BLAST of Csa6G290890 vs. TrEMBL


Match Name	E-value	Identity	Description
V5IV18_HEVBR	1.6e-159	95.59	Elongation factor 1-alpha OS=Hevea brasiliensis GN=EF1A2 PE=2 SV=1	[more]
A0A0A0KS27_CUCSA	1.0e-158	94.58	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G495940 PE=4 SV=1	[more]
A0A0D9Z2R9_9ORYZ	5.1e-158	94.86	Elongation factor 1-alpha OS=Oryza glumipatula PE=3 SV=1	[more]
A0A0D9Z2R9_9ORYZ	2.6e-154	94.74	Elongation factor 1-alpha OS=Oryza glumipatula PE=3 SV=1	[more]
A0A0D3FEJ1_9ORYZ	5.1e-158	94.86	Elongation factor 1-alpha OS=Oryza barthii PE=3 SV=1	[more]

BLAST of Csa6G290890 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G07920.1	1.1e-159	92.54	GTP binding Elongation factor Tu family protein	[more]
AT1G07930.1	1.1e-159	92.54	GTP binding Elongation factor Tu family protein	[more]
AT1G07940.1	1.1e-159	92.54	GTP binding Elongation factor Tu family protein	[more]
AT5G60390.1	1.1e-159	92.54	GTP binding Elongation factor Tu family protein	[more]
AT1G35550.1	9.8e-44	80.77	elongation factor Tu C-terminal domain-containing protein	[more]

BLAST of Csa6G290890 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449463655\|ref\|XP_004149547.1\|	4.3e-166	100.00	PREDICTED: elongation factor 1-alpha [Cucumis sativus]	[more]
gi\|700192104\|gb\|KGN47308.1\|	4.3e-166	100.00	hypothetical protein Csa_6G290890 [Cucumis sativus]	[more]
gi\|659127850\|ref\|XP_008463920.1\|	1.2e-163	98.98	PREDICTED: elongation factor 1-alpha [Cucumis melo]	[more]
gi\|743843595\|ref\|XP_011026991.1\|	6.4e-162	96.95	PREDICTED: elongation factor 1-alpha isoform X1 [Populus euphratica]	[more]
gi\|743843599\|ref\|XP_011026992.1\|	6.4e-162	96.95	PREDICTED: elongation factor 1-alpha isoform X2 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004160	Transl_elong_EFTu/EF1A_C
IPR004161	EFTu-like_2
IPR009000	Transl_B-barrel_sf
IPR009001	Transl_elong_EF1A/Init_IF2_C
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005525	GTP binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0006448	regulation of translational elongation
biological_process	GO:0006790	sulfur compound metabolic process
biological_process	GO:0006414	translational elongation
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0004781	sulfate adenylyltransferase (ATP) activity
molecular_function	GO:0003746	translation elongation factor activity
molecular_function	GO:0016779	nucleotidyltransferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa6G290890.1	Csa6G290890.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004160	Translation elongation factor EFTu/EF1A, C-terminal	PFAM	PF03143	GTP_EFTU_D3	coord: 168..275 score: 4.3
IPR004161	Translation elongation factor EFTu-like, domain 2	PFAM	PF03144	GTP_EFTU_D2	coord: 94..159 score: 4.9
IPR009000	Translation protein, beta-barrel domain	unknown	SSF50447	Translation proteins	coord: 77..206 score: 5.61
IPR009001	Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal	unknown	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain	coord: 172..275 score: 1.23
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 1..80 score: 6.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 6..95 score: 1.28
None	No IPR available	GENE3D	G3DSA:2.40.30.10		coord: 81..184 score: 2.1E-47coord: 185..275 score: 1.1
None	No IPR available	PANTHER	PTHR23115	TRANSLATION FACTOR	coord: 1..295 score: 6.0E
None	No IPR available	PANTHER	PTHR23115:SF157	SUBFAMILY NOT NAMED	coord: 1..295 score: 6.0E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa6G290890	Cla000553	Watermelon (97103) v1	cuwmB515
Csa6G290890	MELO3C025753	Melon (DHL92) v3.5.1	cumeB428
Csa6G290890	ClCG02G020990	Watermelon (Charleston Gray)	cuwcgB440
Csa6G290890	MELO3C025753.2	Melon (DHL92) v3.6.1	cumedB408
Csa6G290890	Bhi10G000469	Wax gourd	cuwgoB609
Csa6G290890	CSPI06G16290	Wild cucumber (PI 183967)	cpicuB313
Csa6G290890	Cucsa.052810	Cucumber (Gy14) v1	cgycuB036
Csa6G290890	CmaCh02G008780	Cucurbita maxima (Rimu)	cmacuB619
Csa6G290890	CmaCh20G004740	Cucurbita maxima (Rimu)	cmacuB557
Csa6G290890	Cp4.1LG16g05600	Cucurbita pepo (Zucchini)	cpecuB294
Csa6G290890	Cp4.1LG05g08600	Cucurbita pepo (Zucchini)	cpecuB745
Csa6G290890	CsGy6G015810	Cucumber (Gy14) v2	cgybcuB281

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa6G290890	Silver-seed gourd	carcuB0334
Csa6G290890	Silver-seed gourd	carcuB0336
Csa6G290890	Silver-seed gourd	carcuB0372
Csa6G290890	Watermelon (97103) v2	cuwmbB417
Csa6G290890	Watermelon (97103) v2	cuwmbB430
Csa6G290890	Watermelon (97103) v2	cuwmbB454
Csa6G290890	Wax gourd	cuwgoB528
Csa6G290890	Wax gourd	cuwgoB598
Csa6G290890	Cucumber (Chinese Long) v2	cucuB041
Csa6G290890	Cucumber (Chinese Long) v2	cucuB124
Csa6G290890	Cucumber (Chinese Long) v2	cucuB161
Csa6G290890	Cucurbita maxima (Rimu)	cmacuB230
Csa6G290890	Cucurbita moschata (Rifu)	cmocuB216
Csa6G290890	Cucurbita moschata (Rifu)	cmocuB547
Csa6G290890	Cucurbita moschata (Rifu)	cmocuB610
Csa6G290890	Melon (DHL92) v3.5.1	cumeB483
Csa6G290890	Watermelon (Charleston Gray)	cuwcgB463
Csa6G290890	Watermelon (97103) v1	cuwmB481
Csa6G290890	Watermelon (97103) v1	cuwmB451
Csa6G290890	Cucurbita pepo (Zucchini)	cpecuB755
Csa6G290890	Bottle gourd (USVL1VR-Ls)	culsiB408
Csa6G290890	Bottle gourd (USVL1VR-Ls)	culsiB417
Csa6G290890	Bottle gourd (USVL1VR-Ls)	culsiB440
Csa6G290890	Bottle gourd (USVL1VR-Ls)	culsiB443
Csa6G290890	Cucumber (Gy14) v2	cgybcuB046
Csa6G290890	Melon (DHL92) v3.6.1	cumedB463