Csa6G200310 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G200310
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionCASP-like protein 6; contains IPR006702 (Uncharacterised protein family UPF0497, trans-membrane plant)
LocationChr6 : 12767755 .. 12768351 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGGAGGAGAGTTAGCATGAGGGGTGTTTTTAGTAATTTTAATATAATACGAAAAATCTCGACCTATGTGTTTTCTTTAAAATAAAATGAATTGTTTTTCAATCATATTTTTTAAAAATTCATTTTGAAAAGATTTATTTTTCAAATTTAAACATTAATTAAATTATTACAAAGTGTAGAGTTAAGGACTAAATGGTTCATTTCACCCAAAACTAAAAGCATCTTTTATAATTAATTTTTGTTGGATAAAGGTATTTTGTAGTGGCAAATGCAATAGCATGTTCATATGCAGCCTTCTCGCTGGTACTTTCACTATTAAACAAAGACAAAAGCAGAGGCTTCATGAGATCGGCGATAATCGTGATGGACATTCTCACGGTGGCCCTCCTGTTTTCTGGCTTCGGAGCGGCCGCTGCCGTGGGCGCCATCGGCCGGCAAGGGAATTCACATCTTAATTGGAACAAAATATGCAATGTGTTCGGAAGATTCTGTGGGCAAGGAGCTGCCTCTCTTCTCCTCTCTCTGCTTGGAGCGATCTCGTTTCTCTCTCTCTCTCTGCTTTCTGCTTTGAGGCTTCAAAGGGGATTCAAGTGA

mRNA sequence

ATGTGGGAGGAGATGGCAAATGCAATAGCATGTTCATATGCAGCCTTCTCGCTGGTACTTTCACTATTAAACAAAGACAAAAGCAGAGGCTTCATGAGATCGGCGATAATCGTGATGGACATTCTCACGGTGGCCCTCCTGTTTTCTGGCTTCGGAGCGGCCGCTGCCGTGGGCGCCATCGGCCGGCAAGGGAATTCACATCTTAATTGGAACAAAATATGCAATGTGTTCGGAAGATTCTGTGGGCAAGGAGCTGCCTCTCTTCTCCTCTCTCTGCTTGGAGCGATCTCGTTTCTCTCTCTCTCTCTGCTTTCTGCTTTGAGGCTTCAAAGGGGATTCAAGTGA

Coding sequence (CDS)

ATGTGGGAGGAGATGGCAAATGCAATAGCATGTTCATATGCAGCCTTCTCGCTGGTACTTTCACTATTAAACAAAGACAAAAGCAGAGGCTTCATGAGATCGGCGATAATCGTGATGGACATTCTCACGGTGGCCCTCCTGTTTTCTGGCTTCGGAGCGGCCGCTGCCGTGGGCGCCATCGGCCGGCAAGGGAATTCACATCTTAATTGGAACAAAATATGCAATGTGTTCGGAAGATTCTGTGGGCAAGGAGCTGCCTCTCTTCTCCTCTCTCTGCTTGGAGCGATCTCGTTTCTCTCTCTCTCTCTGCTTTCTGCTTTGAGGCTTCAAAGGGGATTCAAGTGA

Protein sequence

MWEEMANAIACSYAAFSLVLSLLNKDKSRGFMRSAIIVMDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGAISFLSLSLLSALRLQRGFK*
Homology
[Close]
BLAST of Csa6G200310 vs. Swiss-Prot
Match: CSPL6_SOYBN (CASP-like protein 1E1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.6e-28
Identity = 62/107 (57.94%), Postives = 83/107 (77.57%), Query Frame = 1 

Query: 5   MANAIACSYAAFSLVLSLLNKDKSRGFMRSAIIVMDILTVALLFSGFGAAAAVGAIGRQG 64
           + NAIAC+YAA SL+L+L+N+ KS+G   + I V+D   VALLFSG GAAAAVG +G +G
Sbjct: 81  VTNAIACTYAAMSLLLALVNRGKSKGLW-TLIAVLDTFMVALLFSGNGAAAAVGILGYKG 140

Query: 65  NSHLNWNKICNVFGRFCGQGAASLLLSLLGAISFLSLSLLSALRLQR 112
           NSH+NWNK+CNVFG+FC Q AAS+ +SL+G+++FL L ++  +RL R
Sbjct: 141 NSHVNWNKVCNVFGKFCDQMAASIGVSLIGSLAFLLLVVIPVVRLHR 186

[Close]
BLAST of Csa6G200310 vs. Swiss-Prot
Match: CSPL5_SOYBN (CASP-like protein 1E2 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 2.8e-28
Identity = 61/107 (57.01%), Postives = 82/107 (76.64%), Query Frame = 1 

Query: 5   MANAIACSYAAFSLVLSLLNKDKSRGFMRSAIIVMDILTVALLFSGFGAAAAVGAIGRQG 64
           + NAIAC+YA  SL+L+L+N+ KS+G   + I V+D   VALLFSG GAAAAVG +G +G
Sbjct: 80  VTNAIACTYAVLSLLLALVNRGKSKGLW-TLIAVLDAFMVALLFSGNGAAAAVGVLGYKG 139

Query: 65  NSHLNWNKICNVFGRFCGQGAASLLLSLLGAISFLSLSLLSALRLQR 112
           NSH+NWNK+CNVFG+FC Q AAS+ +SL+G+++FL L ++  +RL R
Sbjct: 140 NSHVNWNKVCNVFGKFCDQMAASIGVSLIGSLAFLLLVIIPGVRLHR 185

[Close]
BLAST of Csa6G200310 vs. Swiss-Prot
Match: CSPL9_RICCO (CASP-like protein 1E1 OS=Ricinus communis GN=RCOM_0680180 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 2.2e-25
Identity = 59/110 (53.64%), Postives = 77/110 (70.00%), Query Frame = 1 

Query: 5   MANAIACSYAAFSLVLSLLNKDKSRGFMRSAIIVMDILTVALLFSGFGAAAAVGAIGRQG 64
           ++NAIACSYAA S++LS   K      M   I+ +D+L VALLFS  GAA A+G +G +G
Sbjct: 87  VSNAIACSYAAISVMLSFCGKKS----MVPIILTLDLLMVALLFSSNGAATAIGVMGYKG 146

Query: 65  NSHLNWNKICNVFGRFCGQGAASLLLSLLGAISFLSLSLLSALRLQRGFK 115
           NSH+ WNK+CNVFG+FC Q AAS++LSL+G+I F+ L +L+A RL    K
Sbjct: 147 NSHVKWNKVCNVFGKFCNQVAASVVLSLIGSIVFVLLVMLTAFRLHNKSK 192

[Close]
BLAST of Csa6G200310 vs. Swiss-Prot
Match: CSPL7_POPTR (CASP-like protein 1E1 OS=Populus trichocarpa GN=POPTRDRAFT_820934 PE=3 SV=2)

HSP 1 Score: 115.9 bits (289), Expect = 2.9e-25
Identity = 62/109 (56.88%), Postives = 80/109 (73.39%), Query Frame = 1 

Query: 6   ANAIACSYAAFSLVLSLLNKDKSRGFMRSAIIVMDILTVALLFSGFGAAAAVGAIGRQGN 65
           +NAIACSYAA SLVL++  K   +G M S +IV+D+L VA+LFS  GAA A+G +G QGN
Sbjct: 89  SNAIACSYAALSLVLAVSGK---KGIM-SIVIVLDLLMVAMLFSSNGAALAIGLMGYQGN 148

Query: 66  SHLNWNKICNVFGRFCGQGAASLLLSLLGAISFLSLSLLSALRLQRGFK 115
           SH+ W K+C+VFGRFC Q A S+ LSLLG+I FL L  +++LRL +  K
Sbjct: 149 SHVRWTKVCHVFGRFCNQVAVSISLSLLGSILFLLLVGITSLRLHKKSK 193

[Close]
BLAST of Csa6G200310 vs. Swiss-Prot
Match: CSPL8_VITVI (CASP-like protein 1E1 OS=Vitis vinifera GN=VIT_07s0104g01350 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.2e-23
Identity = 57/107 (53.27%), Postives = 71/107 (66.36%), Query Frame = 1 

Query: 5   MANAIACSYAAFSLVLSLLNKDKSRGFMRSAIIVMDILTVALLFSGFGAAAAVGAIGRQG 64
           ++NAIACSYAA SLVL  +   + +G    A+IV+D+  V LLFS  GAA AVG +G+ G
Sbjct: 91  VSNAIACSYAAISLVLVTMLGRRGKGGRVLAVIVLDLHMVGLLFSANGAATAVGVLGQYG 150

Query: 65  NSHLNWNKICNVFGRFCGQGAASLLLSLLGAISFLSLSLLSALRLQR 112
           NSH+ W K+CNVF  FC    ASL LS LG++SFL L LL+ L L +
Sbjct: 151 NSHVEWKKVCNVFDSFCHHLVASLALSFLGSLSFLGLVLLAILNLHK 197

[Close]
BLAST of Csa6G200310 vs. TrEMBL
Match: A0A0A0KHF5_CUCSA (CASP-like protein OS=Cucumis sativus GN=Csa_6G200310 PE=3 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 2.4e-55
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 1 

Query: 1   MWEEMANAIACSYAAFSLVLSLLNKDKSRGFMRSAIIVMDILTVALLFSGFGAAAAVGAI 60
           MWEEMANAIACSYAAFSLVLSLLNKDKSRGFMRSAIIVMDILTVALLFSGFGAAAAVGAI
Sbjct: 1   MWEEMANAIACSYAAFSLVLSLLNKDKSRGFMRSAIIVMDILTVALLFSGFGAAAAVGAI 60

Query: 61  GRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGAISFLSLSLLSALRLQRGFK 115
           GRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGAISFLSLSLLSALRLQRGFK
Sbjct: 61  GRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGAISFLSLSLLSALRLQRGFK 114

[Close]
BLAST of Csa6G200310 vs. TrEMBL
Match: I3T6M8_LOTJA (CASP-like protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 2.8e-27
Identity = 69/107 (64.49%), Postives = 83/107 (77.57%), Query Frame = 1 

Query: 5   MANAIACSYAAFSLVLSLLNKDKSRGFMRSAIIVMDILTVALLFSGFGAAAAVGAIGRQG 64
           +ANAIA +Y AFSLVL+++NK KSRG + S I V+D L VALLFSG GAA+AVG +G  G
Sbjct: 86  VANAIASTYGAFSLVLAIINKGKSRG-LGSLITVLDALMVALLFSGNGAASAVGVLGYYG 145

Query: 65  NSHLNWNKICNVFGRFCGQGAASLLLSLLGAISFLSLSLLSALRLQR 112
           NSH+ W K+CNVF  FC Q AAS+LLSLLG+ +FL L LL  LRLQR
Sbjct: 146 NSHVQWKKVCNVFDNFCHQFAASVLLSLLGSAAFLLLVLLPLLRLQR 191

[Close]
BLAST of Csa6G200310 vs. TrEMBL
Match: A0A0B2P5T7_GLYSO (CASP-like protein OS=Glycine soja GN=glysoja_009868 PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.8e-26
Identity = 62/107 (57.94%), Postives = 85/107 (79.44%), Query Frame = 1 

Query: 5   MANAIACSYAAFSLVLSLLNKDKSRGFMRSAIIVMDILTVALLFSGFGAAAAVGAIGRQG 64
           + NAIAC+YAA SL+L+L+N+ KS+G   + I V+D   VALLFSG GAAAAVG +G +G
Sbjct: 81  VTNAIACTYAAMSLLLALVNRGKSKGLW-TLIAVLDTFMVALLFSGNGAAAAVGILGYKG 140

Query: 65  NSHLNWNKICNVFGRFCGQGAASLLLSLLGAISFLSLSLLSALRLQR 112
           NSH+NWNK+CNVFG+FC Q AAS+ +SL+G+++FL L ++  +RL R
Sbjct: 141 NSHVNWNKVCNVFGKFCDQMAASIGVSLIGSLAFLLLVVIPVVRLHR 186

[Close]
BLAST of Csa6G200310 vs. TrEMBL
Match: A0A0R0JDU3_SOYBN (CASP-like protein OS=Glycine max GN=GLYMA_07G251200 PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.8e-26
Identity = 62/107 (57.94%), Postives = 85/107 (79.44%), Query Frame = 1 

Query: 5   MANAIACSYAAFSLVLSLLNKDKSRGFMRSAIIVMDILTVALLFSGFGAAAAVGAIGRQG 64
           + NAIAC+YAA SL+L+L+N+ KS+G   + I V+D   VALLFSG GAAAAVG +G +G
Sbjct: 81  VTNAIACTYAAMSLLLALVNRGKSKGLW-TLIAVLDTFMVALLFSGNGAAAAVGILGYKG 140

Query: 65  NSHLNWNKICNVFGRFCGQGAASLLLSLLGAISFLSLSLLSALRLQR 112
           NSH+NWNK+CNVFG+FC Q AAS+ +SL+G+++FL L ++  +RL R
Sbjct: 141 NSHVNWNKVCNVFGKFCDQMAASIGVSLIGSLAFLLLVVIPVVRLHR 186

[Close]
BLAST of Csa6G200310 vs. TrEMBL
Match: A0A0B2P761_GLYSO (CASP-like protein OS=Glycine soja GN=glysoja_004415 PE=3 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 3.1e-26
Identity = 61/107 (57.01%), Postives = 84/107 (78.50%), Query Frame = 1 

Query: 5   MANAIACSYAAFSLVLSLLNKDKSRGFMRSAIIVMDILTVALLFSGFGAAAAVGAIGRQG 64
           + NAIAC+YA  SL+L+L+N+ KS+G   + I V+D   VALLFSG GAAAAVG +G +G
Sbjct: 80  VTNAIACTYAVLSLLLALVNRGKSKGLW-TLIAVLDAFMVALLFSGNGAAAAVGVLGYKG 139

Query: 65  NSHLNWNKICNVFGRFCGQGAASLLLSLLGAISFLSLSLLSALRLQR 112
           NSH+NWNK+CNVFG+FC Q AAS+ +SL+G+++FL L ++  +RL R
Sbjct: 140 NSHVNWNKVCNVFGKFCDQMAASIGVSLIGSLAFLLLVIIPGVRLHR 185

[Close]
BLAST of Csa6G200310 vs. TAIR10
Match: AT4G15630.1 (AT4G15630.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 108.6 bits (270), Expect = 2.6e-24
Identity = 48/104 (46.15%), Postives = 71/104 (68.27%), Query Frame = 1 

Query: 6   ANAIACSYAAFSLVLSLLNKDKSRGFMRSAIIVMDILTVALLFSGFGAAAAVGAIGRQGN 65
           ANAIAC Y A S+V+ +++K K    +  A+++ D++ VALLFS  GAA A+G +GR GN
Sbjct: 86  ANAIACGYTAISIVIVMISKGKRSKSLLMAVLIGDLMMVALLFSSTGAAGAIGLMGRHGN 145

Query: 66  SHLNWNKICNVFGRFCGQGAASLLLSLLGAISFLSLSLLSALRL 110
            H+ W K+C VFG+FC Q A S+ ++L+ ++ F+ L +L AL+L
Sbjct: 146 KHVMWKKVCGVFGKFCNQAAVSVAITLIASVVFMLLVVLDALKL 189

[Close]
BLAST of Csa6G200310 vs. TAIR10
Match: AT4G15620.1 (AT4G15620.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 99.8 bits (247), Expect = 1.2e-21
Identity = 45/103 (43.69%), Postives = 70/103 (67.96%), Query Frame = 1 

Query: 7   NAIACSYAAFSLVLSLLNKDKSRGFMRSAIIVMDILTVALLFSGFGAAAAVGAIGRQGNS 66
           NAIAC Y A S+ + ++++ +    +   +++ D++ VALLFSG GAA+A+G +G  GN 
Sbjct: 87  NAIACGYTAISIAILMISRGRRSKKLLMVVLLGDLVMVALLFSGTGAASAIGLMGLHGNK 146

Query: 67  HLNWNKICNVFGRFCGQGAASLLLSLLGAISFLSLSLLSALRL 110
           H+ W K+C VFG+FC + A SL L+LL A+ F+ L +L A++L
Sbjct: 147 HVMWKKVCGVFGKFCHRAAPSLPLTLLAAVVFMFLVVLDAIKL 189

[Close]
BLAST of Csa6G200310 vs. TAIR10
Match: AT5G44550.1 (AT5G44550.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 67.8 bits (164), Expect = 5.0e-12
Identity = 34/106 (32.08%), Postives = 55/106 (51.89%), Query Frame = 1 

Query: 5   MANAIACSYAAFSLVLSLLN-KDKSRGFMRSAIIVMDILTVALLFSGFGAAAAVGAIGRQ 64
           +ANA+   +    + L +   K +  GF   ++ ++D+L V L+ +   AAA +  +G+ 
Sbjct: 75  VANAMVSFHNLLMIALQIFGGKMEFTGFRLLSVAILDMLNVTLISAAANAAAFMAEVGKN 134

Query: 65  GNSHLNWNKICNVFGRFCGQGAASLLLSLLGAISFLSLSLLSALRL 110
           GN H  W+KIC+ F  +C  GA +L+ +  G I  L +S  S  RL
Sbjct: 135 GNKHARWDKICDRFATYCDHGAGALIAAFAGVILMLIISAASISRL 180

[Close]
BLAST of Csa6G200310 vs. TAIR10
Match: AT5G15290.1 (AT5G15290.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 66.2 bits (160), Expect = 1.5e-11
Identity = 38/109 (34.86%), Postives = 59/109 (54.13%), Query Frame = 1 

Query: 5   MANAIACSYAAFSLVLSLLN--KDKSRGFMRSAIIVMDILTVALLFSGFGAAAAVGAIGR 64
           +ANA+   Y   SL L+ ++  K K++   R  +I++D+  + LL SG  +AAA+  +  
Sbjct: 78  VANAVVSGYLILSLTLAFVHIVKRKTQN-TRILLIILDVAMLGLLTSGASSAAAIVYLAH 137

Query: 65  QGNSHLNWNKICNVFGRFCGQGAASLLLSLLGAISFLSLSLLSALRLQR 112
            GN+  NW  IC  F  FC + + SL+ S +  +  + L LLSA+ L R
Sbjct: 138 NGNNKTNWFAICQQFNSFCERISGSLIGSFIAIVLLILLILLSAIALSR 185

[Close]
BLAST of Csa6G200310 vs. TAIR10
Match: AT3G06390.1 (AT3G06390.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 65.5 bits (158), Expect = 2.5e-11
Identity = 39/105 (37.14%), Postives = 55/105 (52.38%), Query Frame = 1 

Query: 5   MANAIACSYAAFSLV--LSLLNKDKSRGFMRSAIIVMDILTVALLFSGFGAAAAVGAIGR 64
           +A  +A  YA  S +  +SLL K +        +  +D++ + +L S  G A  V  I  
Sbjct: 91  VALVVASFYALISTLVSISLLLKPEFTAQFSIYLASLDMVMLGILASATGTAGGVAYIAL 150

Query: 65  QGNSHLNWNKICNVFGRFCGQGAASLLLSLLGAISFLSLSLLSAL 108
           +GN  + WNKICNV+ +FC   A SL LSL  ++  L LS+ SAL
Sbjct: 151 KGNEEVGWNKICNVYDKFCRYIATSLALSLFASLLLLVLSIWSAL 195

[Close]
BLAST of Csa6G200310 vs. NCBI nr
Match: gi|700192002|gb|KGN47206.1| (hypothetical protein Csa_6G200310 [Cucumis sativus])

HSP 1 Score: 222.6 bits (566), Expect = 3.5e-55
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 1 

Query: 1   MWEEMANAIACSYAAFSLVLSLLNKDKSRGFMRSAIIVMDILTVALLFSGFGAAAAVGAI 60
           MWEEMANAIACSYAAFSLVLSLLNKDKSRGFMRSAIIVMDILTVALLFSGFGAAAAVGAI
Sbjct: 1   MWEEMANAIACSYAAFSLVLSLLNKDKSRGFMRSAIIVMDILTVALLFSGFGAAAAVGAI 60

Query: 61  GRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGAISFLSLSLLSALRLQRGFK 115
           GRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGAISFLSLSLLSALRLQRGFK
Sbjct: 61  GRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGAISFLSLSLLSALRLQRGFK 114

[Close]
BLAST of Csa6G200310 vs. NCBI nr
Match: gi|449466197|ref|XP_004150813.1| (PREDICTED: CASP-like protein 1E1 [Cucumis sativus])

HSP 1 Score: 211.1 bits (536), Expect = 1.0e-51
Identity = 109/110 (99.09%), Postives = 110/110 (100.00%), Query Frame = 1 

Query: 5   MANAIACSYAAFSLVLSLLNKDKSRGFMRSAIIVMDILTVALLFSGFGAAAAVGAIGRQG 64
           +ANAIACSYAAFSLVLSLLNKDKSRGFMRSAIIVMDILTVALLFSGFGAAAAVGAIGRQG
Sbjct: 86  VANAIACSYAAFSLVLSLLNKDKSRGFMRSAIIVMDILTVALLFSGFGAAAAVGAIGRQG 145

Query: 65  NSHLNWNKICNVFGRFCGQGAASLLLSLLGAISFLSLSLLSALRLQRGFK 115
           NSHLNWNKICNVFGRFCGQGAASLLLSLLGAISFLSLSLLSALRLQRGFK
Sbjct: 146 NSHLNWNKICNVFGRFCGQGAASLLLSLLGAISFLSLSLLSALRLQRGFK 195

[Close]
BLAST of Csa6G200310 vs. NCBI nr
Match: gi|659117219|ref|XP_008458485.1| (PREDICTED: CASP-like protein 6 isoform X1 [Cucumis melo])

HSP 1 Score: 197.2 bits (500), Expect = 1.6e-47
Identity = 101/110 (91.82%), Postives = 107/110 (97.27%), Query Frame = 1 

Query: 5   MANAIACSYAAFSLVLSLLNKDKSRGFMRSAIIVMDILTVALLFSGFGAAAAVGAIGRQG 64
           +ANAIACSYAAFSLVLSLLNK KSRGF+RSAIIVMDILTVALLFSGFGAAAAVGAIG +G
Sbjct: 85  VANAIACSYAAFSLVLSLLNKGKSRGFIRSAIIVMDILTVALLFSGFGAAAAVGAIGWRG 144

Query: 65  NSHLNWNKICNVFGRFCGQGAASLLLSLLGAISFLSLSLLSALRLQRGFK 115
           NSHLNWNK+CNVFGRFCGQGAASLLLSLLGA++FLSLSLLSA RLQRGFK
Sbjct: 145 NSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSAFRLQRGFK 194

[Close]
BLAST of Csa6G200310 vs. NCBI nr
Match: gi|659117221|ref|XP_008458486.1| (PREDICTED: CASP-like protein RCOM_0680180 isoform X2 [Cucumis melo])

HSP 1 Score: 155.2 bits (391), Expect = 6.8e-35
Identity = 78/85 (91.76%), Postives = 83/85 (97.65%), Query Frame = 1 

Query: 30  GFMRSAIIVMDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLL 89
           GF+RSAIIVMDILTVALLFSGFGAAAAVGAIG +GNSHLNWNK+CNVFGRFCGQGAASLL
Sbjct: 82  GFIRSAIIVMDILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLL 141

Query: 90  LSLLGAISFLSLSLLSALRLQRGFK 115
           LSLLGA++FLSLSLLSA RLQRGFK
Sbjct: 142 LSLLGAMAFLSLSLLSAFRLQRGFK 166

[Close]
BLAST of Csa6G200310 vs. NCBI nr
Match: gi|388520217|gb|AFK48170.1| (unknown [Lotus japonicus])

HSP 1 Score: 129.4 bits (324), Expect = 4.0e-27
Identity = 69/107 (64.49%), Postives = 83/107 (77.57%), Query Frame = 1 

Query: 5   MANAIACSYAAFSLVLSLLNKDKSRGFMRSAIIVMDILTVALLFSGFGAAAAVGAIGRQG 64
           +ANAIA +Y AFSLVL+++NK KSRG + S I V+D L VALLFSG GAA+AVG +G  G
Sbjct: 86  VANAIASTYGAFSLVLAIINKGKSRG-LGSLITVLDALMVALLFSGNGAASAVGVLGYYG 145

Query: 65  NSHLNWNKICNVFGRFCGQGAASLLLSLLGAISFLSLSLLSALRLQR 112
           NSH+ W K+CNVF  FC Q AAS+LLSLLG+ +FL L LL  LRLQR
Sbjct: 146 NSHVQWKKVCNVFDNFCHQFAASVLLSLLGSAAFLLLVLLPLLRLQR 191

The following BLAST results are available for this feature:
BLAST of Csa6G200310 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CSPL6_SOYBN1.6e-2857.94CASP-like protein 1E1 OS=Glycine max PE=2 SV=1[more]
CSPL5_SOYBN2.8e-2857.01CASP-like protein 1E2 OS=Glycine max PE=2 SV=1[more]
CSPL9_RICCO2.2e-2553.64CASP-like protein 1E1 OS=Ricinus communis GN=RCOM_0680180 PE=2 SV=1[more]
CSPL7_POPTR2.9e-2556.88CASP-like protein 1E1 OS=Populus trichocarpa GN=POPTRDRAFT_820934 PE=3 SV=2[more]
CSPL8_VITVI1.2e-2353.27CASP-like protein 1E1 OS=Vitis vinifera GN=VIT_07s0104g01350 PE=2 SV=1[more]
BLAST of Csa6G200310 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KHF5_CUCSA2.4e-55100.00CASP-like protein OS=Cucumis sativus GN=Csa_6G200310 PE=3 SV=1[more]
I3T6M8_LOTJA2.8e-2764.49CASP-like protein OS=Lotus japonicus PE=2 SV=1[more]
A0A0B2P5T7_GLYSO1.8e-2657.94CASP-like protein OS=Glycine soja GN=glysoja_009868 PE=3 SV=1[more]
A0A0R0JDU3_SOYBN1.8e-2657.94CASP-like protein OS=Glycine max GN=GLYMA_07G251200 PE=3 SV=1[more]
A0A0B2P761_GLYSO3.1e-2657.01CASP-like protein OS=Glycine soja GN=glysoja_004415 PE=3 SV=1[more]
BLAST of Csa6G200310 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G15630.12.6e-2446.15 Uncharacterised protein family (UPF0497)[more]
AT4G15620.11.2e-2143.69 Uncharacterised protein family (UPF0497)[more]
AT5G44550.15.0e-1232.08 Uncharacterised protein family (UPF0497)[more]
AT5G15290.11.5e-1134.86 Uncharacterised protein family (UPF0497)[more]
AT3G06390.12.5e-1137.14 Uncharacterised protein family (UPF0497)[more]
BLAST of Csa6G200310 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700192002|gb|KGN47206.1|3.5e-55100.00hypothetical protein Csa_6G200310 [Cucumis sativus][more]
gi|449466197|ref|XP_004150813.1|1.0e-5199.09PREDICTED: CASP-like protein 1E1 [Cucumis sativus][more]
gi|659117219|ref|XP_008458485.1|1.6e-4791.82PREDICTED: CASP-like protein 6 isoform X1 [Cucumis melo][more]
gi|659117221|ref|XP_008458486.1|6.8e-3591.76PREDICTED: CASP-like protein RCOM_0680180 isoform X2 [Cucumis melo][more]
gi|388520217|gb|AFK48170.1|4.0e-2764.49unknown [Lotus japonicus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006459CASP/CASPL
IPR006702CASP_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G200310.1Csa6G200310.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006459Casparian strip membrane proteinTIGRFAMsTIGR01569TIGR01569coord: 5..108
score: 7.8
IPR006702Domain of unknown function DUF588PFAMPF04535DUF588coord: 5..96
score: 9.9
NoneNo IPR availablePANTHERPTHR11615NITRATE, FROMATE, IRON DEHYDROGENASEcoord: 5..111
score: 9.4
NoneNo IPR availablePANTHERPTHR11615:SF150SUBFAMILY NOT NAMEDcoord: 5..111
score: 9.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa6G200310Lsi09G014000Bottle gourd (USVL1VR-Ls)culsiB404
Csa6G200310CmaCh06G014690Cucurbita maxima (Rimu)cmacuB846
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Csa6G200310Csa3G151490Cucumber (Chinese Long) v2cucuB123
The following block(s) are covering this gene:
GeneOrganismBlock
Csa6G200310Melon (DHL92) v3.6.1cumedB428
Csa6G200310Silver-seed gourdcarcuB0080
Csa6G200310Cucurbita maxima (Rimu)cmacuB381
Csa6G200310Cucurbita maxima (Rimu)cmacuB907
Csa6G200310Melon (DHL92) v3.5.1cumeB447
Csa6G200310Cucurbita pepo (Zucchini)cpecuB153