Csa6G199280 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa6G199280
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Glutaredoxin; contains IPR011905 (Glutaredoxin-like, plant II), IPR012336 (Thioredoxin-like fold)
Location	Chr6 : 12735729 .. 12736110 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTTGGTAGCAAAAATGGCTGCAAAGAAAGCGGTAGTGATCTTTAGCAAGAGTACATGTTGCATGTGTCATGCAATCGAAAGGTTGTTCTACGATCAAGGAGCGAGTCCGGAGATTCACGAGCTCGATCGGGAGTCGAAAGGGAAGGAAATGGAGTCTGCCCTCTCGAAGACGTTGGGGGGTTGCAGCCCAACCGTGCCAGTTGTGTTCATCGGTGGAAAGCTTATCGGATCCGCCAACACTGTCATGACTCTTCATCTCAATGGTTCCCTAAAAAAATTGCTAAAGGAAGCAGGAGCTATATGGCTTTGATGTTTTGAACATAAATTATTAGTAGAATTGAACAAAAGGTCTCTTTTTTTGATCCTTTTGTGTAAAA

mRNA sequence

ATGGACTTGGTAGCAAAAATGGCTGCAAAGAAAGCGGTAGTGATCTTTAGCAAGAGTACATGTTGCATGTGTCATGCAATCGAAAGGTTGTTCTACGATCAAGGAGCGAGTCCGGAGATTCACGAGCTCGATCGGGAGTCGAAAGGGAAGGAAATGGAGTCTGCCCTCTCGAAGACGTTGGGGGGTTGCAGCCCAACCGTGCCAGTTGTGTTCATCGGTGGAAAGCTTATCGGATCCGCCAACACTGTCATGACTCTTCATCTCAATGGTTCCCTAAAAAAATTGCTAAAGGAAGCAGGAGCTATATGGCTTTGA

Coding sequence (CDS)

ATGGACTTGGTAGCAAAAATGGCTGCAAAGAAAGCGGTAGTGATCTTTAGCAAGAGTACATGTTGCATGTGTCATGCAATCGAAAGGTTGTTCTACGATCAAGGAGCGAGTCCGGAGATTCACGAGCTCGATCGGGAGTCGAAAGGGAAGGAAATGGAGTCTGCCCTCTCGAAGACGTTGGGGGGTTGCAGCCCAACCGTGCCAGTTGTGTTCATCGGTGGAAAGCTTATCGGATCCGCCAACACTGTCATGACTCTTCATCTCAATGGTTCCCTAAAAAAATTGCTAAAGGAAGCAGGAGCTATATGGCTTTGA

Protein sequence

MDLVAKMAAKKAVVIFSKSTCCMCHAIERLFYDQGASPEIHELDRESKGKEMESALSKTLGGCSPTVPVVFIGGKLIGSANTVMTLHLNGSLKKLLKEAGAIWL*

Homology

[Close]

BLAST of Csa6G199280 vs. Swiss-Prot
Match: GRS10_ARATH (Monothiol glutaredoxin-S10 OS=Arabidopsis thaliana GN=GRXS10 PE=3 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 5.6e-36
Identity = 72/104 (69.23%), Postives = 89/104 (85.58%), Query Frame = 1


Query: 1   MDLVAKMAAKKAVVIFSKSTCCMCHAIERLFYDQGASPEIHELDRESKGKEMESALSKTL 60
           MD+VA++A+++AVVIFSKSTCCM HAI+RLFY+QG SP I E+D++  GK++E AL++  
Sbjct: 1   MDVVARLASQRAVVIFSKSTCCMSHAIKRLFYEQGVSPAIVEIDQDMYGKDIEWALARL- 60

Query: 61  GGCSPTVPVVFIGGKLIGSANTVMTLHLNGSLKKLLKEAGAIWL 105
            GCSPTVP VF+GGK +G+ANTVMTLHLNGSLK LLKEAGA+WL
Sbjct: 61  -GCSPTVPAVFVGGKFVGTANTVMTLHLNGSLKILLKEAGALWL 102

[Close]

BLAST of Csa6G199280 vs. Swiss-Prot
Match: GRC11_ARATH (Glutaredoxin-C11 OS=Arabidopsis thaliana GN=GRXC11 PE=3 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 1.3e-29
Identity = 58/104 (55.77%), Postives = 82/104 (78.85%), Query Frame = 1


Query: 1   MDLVAKMAAKKAVVIFSKSTCCMCHAIERLFYDQGASPEIHELDRESKGKEMESALSKTL 60
           M+ +  +++KKA VIF+KS+CCMCH+I+ LFY+ GASP IHELD++ +G+EME AL + L
Sbjct: 1   MERIRDLSSKKAAVIFTKSSCCMCHSIKTLFYELGASPAIHELDKDPEGREMERAL-RAL 60

Query: 61  GGCSPTVPVVFIGGKLIGSANTVMTLHLNGSLKKLLKEAGAIWL 105
           G  +P VP VF+GG+ IGSA  +++ H++GSLK++LK+A AIWL
Sbjct: 61  GSSNPAVPAVFVGGRYIGSAKDIISFHVDGSLKQMLKDAKAIWL 103

[Close]

BLAST of Csa6G199280 vs. Swiss-Prot
Match: GRXS3_ARATH (Monothiol glutaredoxin-S3 OS=Arabidopsis thaliana GN=GRXS3 PE=3 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 3.0e-29
Identity = 63/104 (60.58%), Postives = 80/104 (76.92%), Query Frame = 1


Query: 1   MDLVAKMAAKKAVVIFSKSTCCMCHAIERLFYDQGASPEIHELDRESKGKEMESALSKTL 60
           M+ + KM ++K+VVIFSK++CCM H I+ LF D G +P I+ELD  S+GKE+E AL++  
Sbjct: 1   MENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRGKEIEHALAQL- 60

Query: 61  GGCSPTVPVVFIGGKLIGSANTVMTLHLNGSLKKLLKEAGAIWL 105
            GCSPTVPVVFIGG+L+G AN VM+LHLN SL  +LK AGA+WL
Sbjct: 61  -GCSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]

BLAST of Csa6G199280 vs. Swiss-Prot
Match: GRXS4_ARATH (Monothiol glutaredoxin-S4 OS=Arabidopsis thaliana GN=GRXS4 PE=3 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 5.1e-29
Identity = 62/104 (59.62%), Postives = 79/104 (75.96%), Query Frame = 1


Query: 1   MDLVAKMAAKKAVVIFSKSTCCMCHAIERLFYDQGASPEIHELDRESKGKEMESALSKTL 60
           MD + KM ++K+VVIFSK++CCM H I+ LF D G +P I+ELD  ++GKE+E AL++  
Sbjct: 1   MDKLQKMISEKSVVIFSKNSCCMSHTIKTLFIDFGVNPTIYELDEINRGKEIEQALAQL- 60

Query: 61  GGCSPTVPVVFIGGKLIGSANTVMTLHLNGSLKKLLKEAGAIWL 105
            GCSPTVPVVFIGG+L+G AN VM+LHLN SL  +LK  GA+WL
Sbjct: 61  -GCSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRVGALWL 102

[Close]

BLAST of Csa6G199280 vs. Swiss-Prot
Match: GRC14_ORYSJ (Putative glutaredoxin-C14 OS=Oryza sativa subsp. japonica GN=GRXC14 PE=3 SV=2)

HSP 1 Score: 127.5 bits (319), Expect = 8.7e-29
Identity = 61/104 (58.65%), Postives = 76/104 (73.08%), Query Frame = 1


Query: 1   MDLVAKMAAKKAVVIFSKSTCCMCHAIERLFYDQGASPEIHELDRESKGKEMESALSKTL 60
           MD V K+A+++AVVIF+ S+CCMCH + RLF D G +  +HELD++ +GKEME AL K L
Sbjct: 1   MDRVMKLASERAVVIFTLSSCCMCHTVTRLFCDLGVNALVHELDQDPRGKEMERALLKLL 60

Query: 61  GGCSPTVPVVFIGGKLIGSANTVMTLHLNGSLKKLLKEAGAIWL 105
           G   P VPVVFIGGKL+G  N +M+LHL G L  +LK AGA+WL
Sbjct: 61  GR-GPPVPVVFIGGKLVGGTNKIMSLHLGGELIPMLKNAGALWL 103

[Close]

BLAST of Csa6G199280 vs. TrEMBL
Match: A0A0A0KHF0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G199280 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 1.9e-51
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 1


Query: 1   MDLVAKMAAKKAVVIFSKSTCCMCHAIERLFYDQGASPEIHELDRESKGKEMESALSKTL 60
           MDLVAKMAAKKAVVIFSKSTCCMCHAIERLFYDQGASPEIHELDRESKGKEMESALSKTL
Sbjct: 1   MDLVAKMAAKKAVVIFSKSTCCMCHAIERLFYDQGASPEIHELDRESKGKEMESALSKTL 60

Query: 61  GGCSPTVPVVFIGGKLIGSANTVMTLHLNGSLKKLLKEAGAIWL 105
           GGCSPTVPVVFIGGKLIGSANTVMTLHLNGSLKKLLKEAGAIWL
Sbjct: 61  GGCSPTVPVVFIGGKLIGSANTVMTLHLNGSLKKLLKEAGAIWL 104

[Close]

BLAST of Csa6G199280 vs. TrEMBL
Match: B9MZY7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s22890g PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 2.1e-37
Identity = 79/104 (75.96%), Postives = 92/104 (88.46%), Query Frame = 1


Query: 1   MDLVAKMAAKKAVVIFSKSTCCMCHAIERLFYDQGASPEIHELDRESKGKEMESALSKTL 60
           MD VAK+A++KAVVIFSKS+CCMCHAI+RLFYDQG SP I+ELD +S+GKEME AL +  
Sbjct: 1   MDRVAKLASQKAVVIFSKSSCCMCHAIKRLFYDQGVSPAIYELDEDSRGKEMEWALMRL- 60

Query: 61  GGCSPTVPVVFIGGKLIGSANTVMTLHLNGSLKKLLKEAGAIWL 105
            GC+P+VP VFIGGK +GSANTVMTL LNGSLKKLLKEAGA+WL
Sbjct: 61  -GCNPSVPAVFIGGKFVGSANTVMTLQLNGSLKKLLKEAGALWL 102

[Close]

BLAST of Csa6G199280 vs. TrEMBL
Match: B9RT13_RICCO (Glutaredoxin, grx, putative OS=Ricinus communis GN=RCOM_0680270 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 4.6e-37
Identity = 77/104 (74.04%), Postives = 92/104 (88.46%), Query Frame = 1


Query: 1   MDLVAKMAAKKAVVIFSKSTCCMCHAIERLFYDQGASPEIHELDRESKGKEMESALSKTL 60
           MD VAK+A++KAVVIFSKS+CCMCHAI+RLFY+QG SP I+ELD +S+G EME AL +  
Sbjct: 1   MDRVAKLASQKAVVIFSKSSCCMCHAIKRLFYEQGVSPAIYELDEDSRGTEMEWALMRL- 60

Query: 61  GGCSPTVPVVFIGGKLIGSANTVMTLHLNGSLKKLLKEAGAIWL 105
            GC+P+VP VFIGGK +GSANT+MTLHLNGSLKKLLKEAGA+WL
Sbjct: 61  -GCNPSVPAVFIGGKFVGSANTIMTLHLNGSLKKLLKEAGALWL 102

[Close]

BLAST of Csa6G199280 vs. TrEMBL
Match: D7T6I0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01760 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 6.0e-37
Identity = 78/104 (75.00%), Postives = 91/104 (87.50%), Query Frame = 1


Query: 1   MDLVAKMAAKKAVVIFSKSTCCMCHAIERLFYDQGASPEIHELDRESKGKEMESALSKTL 60
           MD V K+A++KAVVIFSKS+CCM HAI+RLFY+QG SP IHELD +S+GKEME AL +  
Sbjct: 1   MDRVGKLASQKAVVIFSKSSCCMSHAIKRLFYEQGVSPAIHELDEDSRGKEMEWALMRL- 60

Query: 61  GGCSPTVPVVFIGGKLIGSANTVMTLHLNGSLKKLLKEAGAIWL 105
            GC+P+VP VFIGGK +GSANTVMTLHLNGSLKK+LKEAGAIWL
Sbjct: 61  -GCNPSVPAVFIGGKFVGSANTVMTLHLNGSLKKMLKEAGAIWL 102

[Close]

BLAST of Csa6G199280 vs. TrEMBL
Match: A0A067KV30_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02010 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.0e-36
Identity = 77/104 (74.04%), Postives = 91/104 (87.50%), Query Frame = 1


Query: 1   MDLVAKMAAKKAVVIFSKSTCCMCHAIERLFYDQGASPEIHELDRESKGKEMESALSKTL 60
           MD VAK+A +KAVVIFSKS+CCMCHAI+RLFY+Q  SP I+ELD +S+GKEME AL +  
Sbjct: 1   MDRVAKLAGQKAVVIFSKSSCCMCHAIKRLFYEQAVSPAIYELDEDSRGKEMECALLRL- 60

Query: 61  GGCSPTVPVVFIGGKLIGSANTVMTLHLNGSLKKLLKEAGAIWL 105
            GC+P+VP VFIGGK +GSANTVMTLHLNGSLKKLL++AGAIWL
Sbjct: 61  -GCNPSVPAVFIGGKFVGSANTVMTLHLNGSLKKLLRDAGAIWL 102

[Close]

BLAST of Csa6G199280 vs. TAIR10
Match: AT3G21460.1 (AT3G21460.1 Glutaredoxin family protein)

HSP 1 Score: 151.4 bits (381), Expect = 3.2e-37
Identity = 72/104 (69.23%), Postives = 89/104 (85.58%), Query Frame = 1


Query: 1   MDLVAKMAAKKAVVIFSKSTCCMCHAIERLFYDQGASPEIHELDRESKGKEMESALSKTL 60
           MD+VA++A+++AVVIFSKSTCCM HAI+RLFY+QG SP I E+D++  GK++E AL++  
Sbjct: 1   MDVVARLASQRAVVIFSKSTCCMSHAIKRLFYEQGVSPAIVEIDQDMYGKDIEWALARL- 60

Query: 61  GGCSPTVPVVFIGGKLIGSANTVMTLHLNGSLKKLLKEAGAIWL 105
            GCSPTVP VF+GGK +G+ANTVMTLHLNGSLK LLKEAGA+WL
Sbjct: 61  -GCSPTVPAVFVGGKFVGTANTVMTLHLNGSLKILLKEAGALWL 102

[Close]

BLAST of Csa6G199280 vs. TAIR10
Match: AT3G62950.1 (AT3G62950.1 Thioredoxin superfamily protein)

HSP 1 Score: 130.2 bits (326), Expect = 7.5e-31
Identity = 58/104 (55.77%), Postives = 82/104 (78.85%), Query Frame = 1


Query: 1   MDLVAKMAAKKAVVIFSKSTCCMCHAIERLFYDQGASPEIHELDRESKGKEMESALSKTL 60
           M+ +  +++KKA VIF+KS+CCMCH+I+ LFY+ GASP IHELD++ +G+EME AL + L
Sbjct: 1   MERIRDLSSKKAAVIFTKSSCCMCHSIKTLFYELGASPAIHELDKDPEGREMERAL-RAL 60

Query: 61  GGCSPTVPVVFIGGKLIGSANTVMTLHLNGSLKKLLKEAGAIWL 105
           G  +P VP VF+GG+ IGSA  +++ H++GSLK++LK+A AIWL
Sbjct: 61  GSSNPAVPAVFVGGRYIGSAKDIISFHVDGSLKQMLKDAKAIWL 103

[Close]

BLAST of Csa6G199280 vs. TAIR10
Match: AT4G15700.1 (AT4G15700.1 Thioredoxin superfamily protein)

HSP 1 Score: 129.0 bits (323), Expect = 1.7e-30
Identity = 63/104 (60.58%), Postives = 80/104 (76.92%), Query Frame = 1


Query: 1   MDLVAKMAAKKAVVIFSKSTCCMCHAIERLFYDQGASPEIHELDRESKGKEMESALSKTL 60
           M+ + KM ++K+VVIFSK++CCM H I+ LF D G +P I+ELD  S+GKE+E AL++  
Sbjct: 1   MENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRGKEIEHALAQL- 60

Query: 61  GGCSPTVPVVFIGGKLIGSANTVMTLHLNGSLKKLLKEAGAIWL 105
            GCSPTVPVVFIGG+L+G AN VM+LHLN SL  +LK AGA+WL
Sbjct: 61  -GCSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]

BLAST of Csa6G199280 vs. TAIR10
Match: AT4G15680.1 (AT4G15680.1 Thioredoxin superfamily protein)

HSP 1 Score: 128.3 bits (321), Expect = 2.9e-30
Identity = 62/104 (59.62%), Postives = 79/104 (75.96%), Query Frame = 1


Query: 1   MDLVAKMAAKKAVVIFSKSTCCMCHAIERLFYDQGASPEIHELDRESKGKEMESALSKTL 60
           MD + KM ++K+VVIFSK++CCM H I+ LF D G +P I+ELD  ++GKE+E AL++  
Sbjct: 1   MDKLQKMISEKSVVIFSKNSCCMSHTIKTLFIDFGVNPTIYELDEINRGKEIEQALAQL- 60

Query: 61  GGCSPTVPVVFIGGKLIGSANTVMTLHLNGSLKKLLKEAGAIWL 105
            GCSPTVPVVFIGG+L+G AN VM+LHLN SL  +LK  GA+WL
Sbjct: 61  -GCSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRVGALWL 102

[Close]

BLAST of Csa6G199280 vs. TAIR10
Match: AT4G15670.1 (AT4G15670.1 Thioredoxin superfamily protein)

HSP 1 Score: 125.9 bits (315), Expect = 1.4e-29
Identity = 60/104 (57.69%), Postives = 79/104 (75.96%), Query Frame = 1


Query: 1   MDLVAKMAAKKAVVIFSKSTCCMCHAIERLFYDQGASPEIHELDRESKGKEMESALSKTL 60
           M+ + KM ++K++VIFSK++CCM H I+ LF D G +P I+ELD  ++GKE+E AL++  
Sbjct: 1   MEKLQKMTSEKSLVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEINRGKEIEQALAQL- 60

Query: 61  GGCSPTVPVVFIGGKLIGSANTVMTLHLNGSLKKLLKEAGAIWL 105
            GCSPTVPVVFIGG+L+G AN VM+LHLN SL  +LK  GA+WL
Sbjct: 61  -GCSPTVPVVFIGGQLVGGANQVMSLHLNRSLIPMLKRVGALWL 102

[Close]

BLAST of Csa6G199280 vs. NCBI nr
Match: gi|449466195|ref|XP_004150812.1| (PREDICTED: monothiol glutaredoxin-S10 [Cucumis sativus])

HSP 1 Score: 209.5 bits (532), Expect = 2.8e-51
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 1


Query: 1   MDLVAKMAAKKAVVIFSKSTCCMCHAIERLFYDQGASPEIHELDRESKGKEMESALSKTL 60
           MDLVAKMAAKKAVVIFSKSTCCMCHAIERLFYDQGASPEIHELDRESKGKEMESALSKTL
Sbjct: 1   MDLVAKMAAKKAVVIFSKSTCCMCHAIERLFYDQGASPEIHELDRESKGKEMESALSKTL 60

Query: 61  GGCSPTVPVVFIGGKLIGSANTVMTLHLNGSLKKLLKEAGAIWL 105
           GGCSPTVPVVFIGGKLIGSANTVMTLHLNGSLKKLLKEAGAIWL
Sbjct: 61  GGCSPTVPVVFIGGKLIGSANTVMTLHLNGSLKKLLKEAGAIWL 104

[Close]

BLAST of Csa6G199280 vs. NCBI nr
Match: gi|659117210|ref|XP_008458480.1| (PREDICTED: monothiol glutaredoxin-S10 [Cucumis melo])

HSP 1 Score: 200.3 bits (508), Expect = 1.7e-48
Identity = 101/104 (97.12%), Postives = 103/104 (99.04%), Query Frame = 1


Query: 1   MDLVAKMAAKKAVVIFSKSTCCMCHAIERLFYDQGASPEIHELDRESKGKEMESALSKTL 60
           MDLVAKMAAKKAVVIF+KSTCCMCHAIERLFYDQGASPEIHELDRES+GKEMESALSKTL
Sbjct: 1   MDLVAKMAAKKAVVIFTKSTCCMCHAIERLFYDQGASPEIHELDRESRGKEMESALSKTL 60

Query: 61  GGCSPTVPVVFIGGKLIGSANTVMTLHLNGSLKKLLKEAGAIWL 105
            GCSPTVPVVFIGGKLIGSANTVMTLHLNGSLKKLLKEAGAIWL
Sbjct: 61  -GCSPTVPVVFIGGKLIGSANTVMTLHLNGSLKKLLKEAGAIWL 103

[Close]

BLAST of Csa6G199280 vs. NCBI nr
Match: gi|566185448|ref|XP_006380203.1| (hypothetical protein POPTR_0008s22890g [Populus trichocarpa])

HSP 1 Score: 162.9 bits (411), Expect = 3.0e-37
Identity = 79/104 (75.96%), Postives = 92/104 (88.46%), Query Frame = 1


Query: 1   MDLVAKMAAKKAVVIFSKSTCCMCHAIERLFYDQGASPEIHELDRESKGKEMESALSKTL 60
           MD VAK+A++KAVVIFSKS+CCMCHAI+RLFYDQG SP I+ELD +S+GKEME AL +  
Sbjct: 1   MDRVAKLASQKAVVIFSKSSCCMCHAIKRLFYDQGVSPAIYELDEDSRGKEMEWALMRL- 60

Query: 61  GGCSPTVPVVFIGGKLIGSANTVMTLHLNGSLKKLLKEAGAIWL 105
            GC+P+VP VFIGGK +GSANTVMTL LNGSLKKLLKEAGA+WL
Sbjct: 61  -GCNPSVPAVFIGGKFVGSANTVMTLQLNGSLKKLLKEAGALWL 102

[Close]

BLAST of Csa6G199280 vs. NCBI nr
Match: gi|1000971383|ref|XP_015573300.1| (PREDICTED: monothiol glutaredoxin-S10 [Ricinus communis])

HSP 1 Score: 161.8 bits (408), Expect = 6.6e-37
Identity = 77/104 (74.04%), Postives = 92/104 (88.46%), Query Frame = 1


Query: 1   MDLVAKMAAKKAVVIFSKSTCCMCHAIERLFYDQGASPEIHELDRESKGKEMESALSKTL 60
           MD VAK+A++KAVVIFSKS+CCMCHAI+RLFY+QG SP I+ELD +S+G EME AL +  
Sbjct: 1   MDRVAKLASQKAVVIFSKSSCCMCHAIKRLFYEQGVSPAIYELDEDSRGTEMEWALMRL- 60

Query: 61  GGCSPTVPVVFIGGKLIGSANTVMTLHLNGSLKKLLKEAGAIWL 105
            GC+P+VP VFIGGK +GSANT+MTLHLNGSLKKLLKEAGA+WL
Sbjct: 61  -GCNPSVPAVFIGGKFVGSANTIMTLHLNGSLKKLLKEAGALWL 102

[Close]

BLAST of Csa6G199280 vs. NCBI nr
Match: gi|731388864|ref|XP_010649773.1| (PREDICTED: monothiol glutaredoxin-S10 [Vitis vinifera])

HSP 1 Score: 161.4 bits (407), Expect = 8.7e-37
Identity = 78/104 (75.00%), Postives = 91/104 (87.50%), Query Frame = 1


Query: 1   MDLVAKMAAKKAVVIFSKSTCCMCHAIERLFYDQGASPEIHELDRESKGKEMESALSKTL 60
           MD V K+A++KAVVIFSKS+CCM HAI+RLFY+QG SP IHELD +S+GKEME AL +  
Sbjct: 1   MDRVGKLASQKAVVIFSKSSCCMSHAIKRLFYEQGVSPAIHELDEDSRGKEMEWALMRL- 60

Query: 61  GGCSPTVPVVFIGGKLIGSANTVMTLHLNGSLKKLLKEAGAIWL 105
            GC+P+VP VFIGGK +GSANTVMTLHLNGSLKK+LKEAGAIWL
Sbjct: 61  -GCNPSVPAVFIGGKFVGSANTVMTLHLNGSLKKMLKEAGAIWL 102

The following BLAST results are available for this feature:

BLAST of Csa6G199280 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GRS10_ARATH	5.6e-36	69.23	Monothiol glutaredoxin-S10 OS=Arabidopsis thaliana GN=GRXS10 PE=3 SV=1	[more]
GRC11_ARATH	1.3e-29	55.77	Glutaredoxin-C11 OS=Arabidopsis thaliana GN=GRXC11 PE=3 SV=1	[more]
GRXS3_ARATH	3.0e-29	60.58	Monothiol glutaredoxin-S3 OS=Arabidopsis thaliana GN=GRXS3 PE=3 SV=1	[more]
GRXS4_ARATH	5.1e-29	59.62	Monothiol glutaredoxin-S4 OS=Arabidopsis thaliana GN=GRXS4 PE=3 SV=1	[more]
GRC14_ORYSJ	8.7e-29	58.65	Putative glutaredoxin-C14 OS=Oryza sativa subsp. japonica GN=GRXC14 PE=3 SV=2	[more]

BLAST of Csa6G199280 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHF0_CUCSA	1.9e-51	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G199280 PE=4 SV=1	[more]
B9MZY7_POPTR	2.1e-37	75.96	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s22890g PE=4 SV=1	[more]
B9RT13_RICCO	4.6e-37	74.04	Glutaredoxin, grx, putative OS=Ricinus communis GN=RCOM_0680270 PE=4 SV=1	[more]
D7T6I0_VITVI	6.0e-37	75.00	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01760 PE=4 SV=...	[more]
A0A067KV30_JATCU	1.0e-36	74.04	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02010 PE=4 SV=1	[more]

BLAST of Csa6G199280 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G21460.1	3.2e-37	69.23	Glutaredoxin family protein	[more]
AT3G62950.1	7.5e-31	55.77	Thioredoxin superfamily protein	[more]
AT4G15700.1	1.7e-30	60.58	Thioredoxin superfamily protein	[more]
AT4G15680.1	2.9e-30	59.62	Thioredoxin superfamily protein	[more]
AT4G15670.1	1.4e-29	57.69	Thioredoxin superfamily protein	[more]

BLAST of Csa6G199280 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449466195\|ref\|XP_004150812.1\|	2.8e-51	100.00	PREDICTED: monothiol glutaredoxin-S10 [Cucumis sativus]	[more]
gi\|659117210\|ref\|XP_008458480.1\|	1.7e-48	97.12	PREDICTED: monothiol glutaredoxin-S10 [Cucumis melo]	[more]
gi\|566185448\|ref\|XP_006380203.1\|	3.0e-37	75.96	hypothetical protein POPTR_0008s22890g [Populus trichocarpa]	[more]
gi\|1000971383\|ref\|XP_015573300.1\|	6.6e-37	74.04	PREDICTED: monothiol glutaredoxin-S10 [Ricinus communis]	[more]
gi\|731388864\|ref\|XP_010649773.1\|	8.7e-37	75.00	PREDICTED: monothiol glutaredoxin-S10 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002109	Glutaredoxin
IPR011905	GlrX-like_pln_2
IPR012336	Thioredoxin-like_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0009055	electron carrier activity
GO:0015035	protein disulfide oxidoreductase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0045454	cell redox homeostasis

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0005623	cell
molecular_function	GO:0009055	electron carrier activity
molecular_function	GO:0015035	protein disulfide oxidoreductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa6G199280.1	Csa6G199280.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 13..77 score: 6.7
IPR002109	Glutaredoxin	PROFILE	PS51354	GLUTAREDOXIN_2	coord: 1..103 score: 22
IPR011905	Glutaredoxin-like, plant II	TIGRFAMs	TIGR02189	TIGR02189	coord: 4..104 score: 5.6
IPR012336	Thioredoxin-like fold	GENE3D	G3DSA:3.40.30.10		coord: 3..103 score: 3.0
IPR012336	Thioredoxin-like fold	unknown	SSF52833	Thioredoxin-like	coord: 2..103 score: 1.17
None	No IPR available	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 1..104 score: 7.5
None	No IPR available	PANTHER	PTHR10168:SF105	MONOTHIOL GLUTAREDOXIN-S10	coord: 1..104 score: 7.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa6G199280	Cla009324	Watermelon (97103) v1	cuwmB541
Csa6G199280	MELO3C021351	Melon (DHL92) v3.5.1	cumeB447
Csa6G199280	ClCG06G005330	Watermelon (Charleston Gray)	cuwcgB478
Csa6G199280	Lsi09G014070	Bottle gourd (USVL1VR-Ls)	culsiB404
Csa6G199280	MELO3C021351.2	Melon (DHL92) v3.6.1	cumedB428
Csa6G199280	Cla97C06G114830	Watermelon (97103) v2	cuwmbB470
Csa6G199280	Bhi12G001854	Wax gourd	cuwgoB537
Csa6G199280	CSPI06G14900	Wild cucumber (PI 183967)	cpicuB314
Csa6G199280	Cucsa.172110	Cucumber (Gy14) v1	cgycuB262
Csa6G199280	CmaCh08G012080	Cucurbita maxima (Rimu)	cmacuB907
Csa6G199280	CmoCh08G011820	Cucurbita moschata (Rifu)	cmocuB893
Csa6G199280	Cp4.1LG17g00730	Cucurbita pepo (Zucchini)	cpecuB326
Csa6G199280	CsGy6G014780	Cucumber (Gy14) v2	cgybcuB282

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa6G199280	Silver-seed gourd	carcuB0080
Csa6G199280	Silver-seed gourd	carcuB0354
Csa6G199280	Watermelon (97103) v2	cuwmbB467
Csa6G199280	Wax gourd	cuwgoB559
Csa6G199280	Cucumber (Chinese Long) v2	cucuB123
Csa6G199280	Cucumber (Gy14) v1	cgycuB373
Csa6G199280	Cucurbita maxima (Rimu)	cmacuB381
Csa6G199280	Cucurbita maxima (Rimu)	cmacuB846
Csa6G199280	Cucurbita moschata (Rifu)	cmocuB371
Csa6G199280	Melon (DHL92) v3.5.1	cumeB499
Csa6G199280	Cucurbita pepo (Zucchini)	cpecuB153
Csa6G199280	Bottle gourd (USVL1VR-Ls)	culsiB466
Csa6G199280	Melon (DHL92) v3.6.1	cumedB479