Csa6G194680 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa6G194680
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	SRC2; contains IPR008973 (C2 calcium/lipid-binding domain, CaLB)
Location	Chr6 : 12633460 .. 12634770 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCTCATGAGTTTAGAAATGTGTGTGGAATCTGCTGAAGATCTTAAAAAATTTGATGATGATCTTTCCTCCAAGATGAAGGTATACGTCGTTGTTTCGGTTACGAGTGGCGTTTTCAGCGAGCAACGAGCTCAAACCAACGTGGATATGGAAGGAGGTGAAAATCCGAGATGGAACTTTCCAATGAAATTTCTCATTGACCTAAACGCTGCAAAACAAGATCTCAAATCTCTTCTTACTTTCACTATCAAATCTGAAACCCCACAAGTACACAAAAGCATTGGCGAAACCAAGGTAAGGATTGTAGAGCTTTTGGAGACTGTTGGAGAACAAAAATCCATGCGATACATTTCCCGTCCAATCATGGATACACTCGGACAAACCACAAATGCCAGGTTAAGTATTCATGTAATCAAACTTTACTATCTAAATTAAAACATACTTTCAGAGAAAGTGAAATAGTAACAAATTAGAGATAGCTTCGTTGAAAAATAAACTCCTATGAGTTAGATAATTAAATTGAGCCAACTTACTATAGATAATCAACCAAGAAACTAATTAATAATACCCAATAACAATCCAACTAATTAAGTTTACAAAGGCTCTAGTATTAGCTATTGACATTTAGGGTCAATTGATTTGATATTACGGGTCAATTGATAATTTAAAATTAAATGACATTAGAGTAGGGAGGTCTAGTGCGTTTGTTAACATATTGTTTATGGTTGGTGTTCCTCTCCAATAAATATTGATTTCTATTTGTTGTGTCTTCTTCTATATCGAGTCCACGAGCAAGGAAAAACGTTAGTGATATATATACATAATTAAATTTATCTTTAATTTATCTATTAGCTCAAGTTTTTTGGTAAATTAAAGTACACTACAAATTCTATTAGATTACTTATTCGATCTCTTAAGTTGATTGGTGTAATTTAATATGTCAGGTTGAATTTTATAATCAAATTTAACAAGATAGAATTACACGGATCGGTGACGGGTGAGAAGATATCACATTTAAATGAAAAAGTTGATCAGAATGAGAATGTGAAAAATAATACGGCCAGCAGTGAAGTTGCCCAAGATGTGGCCATGAAATTGACCATGTGTGTGGTTGAGGGTGGTGTCACAGGTGTGAGCAATGTTGTGGCCGAAAATTTGATGAAAGAGTTTGTTGAGGGTTCGAGTTCCGATACAACTGCAACATCTATAGTTGAAACTGAAACTTTTTCGGACACTTCGGTCGTTGATGAGTCGATAGATGATTCTAGTTCCTTCCTTGATATAATTTATTTCTTTTTTTTTTGTTAA

mRNA sequence

ATGGATCTCATGAGTTTAGAAATGTGTGTGGAATCTGCTGAAGATCTTAAAAAATTTGATGATGATCTTTCCTCCAAGATGAAGGTATACGTCGTTGTTTCGGTTACGAGTGGCGTTTTCAGCGAGCAACGAGCTCAAACCAACGTGGATATGGAAGGAGGTGAAAATCCGAGATGGAACTTTCCAATGAAATTTCTCATTGACCTAAACGCTGCAAAACAAGATCTCAAATCTCTTCTTACTTTCACTATCAAATCTGAAACCCCACAAGTACACAAAAGCATTGGCGAAACCAAGGTAAGGATTGTAGAGCTTTTGGAGACTGTTGGAGAACAAAAATCCATGCGATACATTTCCCGTCCAATCATGGATACACTCGGACAAACCACAAATGCCAGGTTGAATTTTATAATCAAATTTAACAAGATAGAATTACACGGATCGGTGACGGGTGAGAAGATATCACATTTAAATGAAAAAGTTGATCAGAATGAGAATGTGAAAAATAATACGGCCAGCAGTGAAGTTGCCCAAGATGTGGCCATGAAATTGACCATGTGTGTGGTTGAGGGTGGTGTCACAGGTGTGAGCAATGTTGTGGCCGAAAATTTGATGAAAGAGTTTGTTGAGGGTTCGAGTTCCGATACAACTGCAACATCTATAGTTGAAACTGAAACTTTTTCGGACACTTCGGTCGTTGATGAGTCGATAGATGATTCTAGTTCCTTCCTTGATATAATTTATTTCTTTTTTTTTTGTTAA

Coding sequence (CDS)

ATGGATCTCATGAGTTTAGAAATGTGTGTGGAATCTGCTGAAGATCTTAAAAAATTTGATGATGATCTTTCCTCCAAGATGAAGGTATACGTCGTTGTTTCGGTTACGAGTGGCGTTTTCAGCGAGCAACGAGCTCAAACCAACGTGGATATGGAAGGAGGTGAAAATCCGAGATGGAACTTTCCAATGAAATTTCTCATTGACCTAAACGCTGCAAAACAAGATCTCAAATCTCTTCTTACTTTCACTATCAAATCTGAAACCCCACAAGTACACAAAAGCATTGGCGAAACCAAGGTAAGGATTGTAGAGCTTTTGGAGACTGTTGGAGAACAAAAATCCATGCGATACATTTCCCGTCCAATCATGGATACACTCGGACAAACCACAAATGCCAGGTTGAATTTTATAATCAAATTTAACAAGATAGAATTACACGGATCGGTGACGGGTGAGAAGATATCACATTTAAATGAAAAAGTTGATCAGAATGAGAATGTGAAAAATAATACGGCCAGCAGTGAAGTTGCCCAAGATGTGGCCATGAAATTGACCATGTGTGTGGTTGAGGGTGGTGTCACAGGTGTGAGCAATGTTGTGGCCGAAAATTTGATGAAAGAGTTTGTTGAGGGTTCGAGTTCCGATACAACTGCAACATCTATAGTTGAAACTGAAACTTTTTCGGACACTTCGGTCGTTGATGAGTCGATAGATGATTCTAGTTCCTTCCTTGATATAATTTATTTCTTTTTTTTTTGTTAA

Protein sequence

MDLMSLEMCVESAEDLKKFDDDLSSKMKVYVVVSVTSGVFSEQRAQTNVDMEGGENPRWNFPMKFLIDLNAAKQDLKSLLTFTIKSETPQVHKSIGETKVRIVELLETVGEQKSMRYISRPIMDTLGQTTNARLNFIIKFNKIELHGSVTGEKISHLNEKVDQNENVKNNTASSEVAQDVAMKLTMCVVEGGVTGVSNVVAENLMKEFVEGSSSDTTATSIVETETFSDTSVVDESIDDSSSFLDIIYFFFFC*

Homology

[Close]

BLAST of Csa6G194680 vs. Swiss-Prot
Match: SRC2_ARATH (Protein SRC2 homolog OS=Arabidopsis thaliana GN=SRC2 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 7.5e-10
Identity = 51/154 (33.12%), Postives = 75/154 (48.70%), Query Frame = 1


Query: 1   MDLMSLEMCVESAEDLKKFDDDLSSKMKVYVVVSVTSGVFSEQRAQTNVDMEGGENPRWN 60
           M+  SL++ + SAEDLK  D  L  K  +Y VVS+     ++Q  +T VD + G  P+W 
Sbjct: 1   MECRSLDLTIISAEDLK--DVQLIGKQDLYAVVSINGDARTKQ--KTKVDKDCGTKPKWK 60

Query: 61  FPMKFLIDLNAAKQDLKSLLTFTIKSETPQV-HKSIGETKVRIVELLE--TVGEQKSMRY 120
             MK  +D +AA +D +  L F I ++ P    K +GE  V + ELL+     E+K++ Y
Sbjct: 61  HQMKLTVD-DAAARDNRLTLVFEIVADRPIAGDKPVGEVSVPVKELLDQNKGDEEKTVTY 120

Query: 121 ISRPIMDTLGQTTNARLNFIIKFNKIELHGSVTG 152
             R             L F  KF +   +GS +G
Sbjct: 121 AVR----LPNGKAKGSLKFSFKFGEKYTYGSSSG 145

[Close]

BLAST of Csa6G194680 vs. TrEMBL
Match: A0A0A0KEB7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G194680 PE=4 SV=1)

HSP 1 Score: 492.7 bits (1267), Expect = 2.8e-136
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 1


Query: 1   MDLMSLEMCVESAEDLKKFDDDLSSKMKVYVVVSVTSGVFSEQRAQTNVDMEGGENPRWN 60
           MDLMSLEMCVESAEDLKKFDDDLSSKMKVYVVVSVTSGVFSEQRAQTNVDMEGGENPRWN
Sbjct: 1   MDLMSLEMCVESAEDLKKFDDDLSSKMKVYVVVSVTSGVFSEQRAQTNVDMEGGENPRWN 60

Query: 61  FPMKFLIDLNAAKQDLKSLLTFTIKSETPQVHKSIGETKVRIVELLETVGEQKSMRYISR 120
           FPMKFLIDLNAAKQDLKSLLTFTIKSETPQVHKSIGETKVRIVELLETVGEQKSMRYISR
Sbjct: 61  FPMKFLIDLNAAKQDLKSLLTFTIKSETPQVHKSIGETKVRIVELLETVGEQKSMRYISR 120

Query: 121 PIMDTLGQTTNARLNFIIKFNKIELHGSVTGEKISHLNEKVDQNENVKNNTASSEVAQDV 180
           PIMDTLGQTTNARLNFIIKFNKIELHGSVTGEKISHLNEKVDQNENVKNNTASSEVAQDV
Sbjct: 121 PIMDTLGQTTNARLNFIIKFNKIELHGSVTGEKISHLNEKVDQNENVKNNTASSEVAQDV 180

Query: 181 AMKLTMCVVEGGVTGVSNVVAENLMKEFVEGSSSDTTATSIVETETFSDTSVVDESIDDS 240
           AMKLTMCVVEGGVTGVSNVVAENLMKEFVEGSSSDTTATSIVETETFSDTSVVDESIDDS
Sbjct: 181 AMKLTMCVVEGGVTGVSNVVAENLMKEFVEGSSSDTTATSIVETETFSDTSVVDESIDDS 240

Query: 241 SSFLDIIYFFFFC 254
           SSFLDIIYFFFFC
Sbjct: 241 SSFLDIIYFFFFC 253

[Close]

BLAST of Csa6G194680 vs. TrEMBL
Match: F6HE67_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01400 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 6.8e-18
Identity = 63/150 (42.00%), Postives = 89/150 (59.33%), Query Frame = 1


Query: 1   MDLMSLEMCVESAEDLKKFDDDLSSKMKVYVVVSVTSGVFSEQRAQTNVDMEGGENPRWN 60
           M+  +LE+ V SA+DLK  D +L SKM VYVVVS+     S+Q+  T VD +GG NP WN
Sbjct: 1   MEYRTLEINVISAKDLK--DVNLISKMDVYVVVSINGDSRSKQK--TPVDRDGGTNPTWN 60

Query: 61  FPMKFLIDLNAAKQDLKSLLTFTIKSETPQVHKSIGETKVRIVELLETVGEQKSMRYISR 120
           FPMKF +D +AA+Q+ +  L+F ++ E     K IGE  V I ELL+  GE K ++++S 
Sbjct: 61  FPMKFTVDESAAQQN-RLTLSFKLRCERTLGDKDIGEVNVPIKELLDPAGESKPIQFVSY 120

Query: 121 PIMDTLGQTTNARLNFIIKFNKIELHGSVT 151
            +    G+     LN   KF +  +  S T
Sbjct: 121 QVRKPSGK-PKGELNLSYKFGEKSMSQSAT 144

[Close]

BLAST of Csa6G194680 vs. TrEMBL
Match: B9HSC2_POPTR (Shock protein SRC2 OS=Populus trichocarpa GN=POPTR_0010s02500g PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 3.4e-17
Identity = 64/148 (43.24%), Postives = 89/148 (60.14%), Query Frame = 1


Query: 1   MDLMSLEMCVESAEDLKKFDDDLSSKMKVYVVVSVTSGVFSEQ----RAQTNVDMEGGEN 60
           MD  +LE+ V SA DLK  D +  SKM VY VVS+ SGV S+Q    + +T VD +GG+N
Sbjct: 1   MDQRTLEINVISARDLK--DVNYISKMDVYAVVSI-SGVDSKQQPKQKTKTPVDRDGGKN 60

Query: 61  PRWNFPMKFLIDLNAAKQDLKSLLTFTIKSETPQVHKSIGETKVRIVELLETVGEQKSMR 120
           P WNFP+KF I   +  ++  SL+ F +K E     K IGE  V I ELL++ G+ KSM+
Sbjct: 61  PTWNFPIKFTIPETSLAENHLSLV-FKLKCERALGDKDIGEVNVPIKELLDSAGDGKSMK 120

Query: 121 YISRPIMDTLGQTTNARLNFIIKFNKIE 145
           ++S  +    G+     +NF  KF +IE
Sbjct: 121 FVSYQVRKPSGK-PKGEINFSFKFGEIE 143

[Close]

BLAST of Csa6G194680 vs. TrEMBL
Match: A0A067JYD4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18863 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.3e-16
Identity = 68/165 (41.21%), Postives = 98/165 (59.39%), Query Frame = 1


Query: 1   MDLMSLEMCVESAEDLKKFDDDLSSKMKVYVVVSVTSGVFS-EQRAQTNVDMEGGENPRW 60
           M+  +LE+ + SA+DLK  D +L SKM VY VVS++      +Q+ +T VD +GG NP W
Sbjct: 1   MEQRTLEINLISAKDLK--DVNLFSKMDVYAVVSISGDSQQPKQKIKTPVDHDGGTNPTW 60

Query: 61  NFPMKFLIDLNAAKQDLKSLLTFTIKSETPQVHKSIGETKVRIVELLETVGEQKSMRYIS 120
           NFP KF I L A  Q  + +L   ++ E     K IGE  V I ELLET+G+ KSM+++S
Sbjct: 61  NFPAKFTI-LEAPAQQNRLILVINLRCERALGDKDIGEVNVPIKELLETMGDGKSMQFVS 120

Query: 121 RPIMDTLGQTTNARLNFIIKFNKIELHGSVTG-EKISHLNEKVDQ 164
             +    G+    +LNF  KF++  +   V+G EK+S   EK +Q
Sbjct: 121 YQVRKPSGK-PKGQLNFSYKFSEKAI---VSGPEKVS---EKANQ 155

[Close]

BLAST of Csa6G194680 vs. TrEMBL
Match: A0A0S3RIE2_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G325100 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.7e-13
Identity = 55/162 (33.95%), Postives = 91/162 (56.17%), Query Frame = 1


Query: 1   MDLMSLEMCVESAEDLKKFDDDLSSKMKVYVVVSVTSGVFSEQRAQTNVDMEGGENPRWN 60
           M+  +LE+ + SA+D+K  +  L SKM VYVV+S+T   F  Q A T+VD +GG NP+WN
Sbjct: 1   MEYRTLELNIISAKDIKNVN--LFSKMDVYVVISLTGDPFHLQSATTHVDKDGGCNPKWN 60

Query: 61  FPMKFLIDLNAAKQDLKSLLTFTIKSETPQVHKSIGETKVRIVELLETVGEQKSMRYISR 120
           +P+KF ++   AK++  +L    I   T      IG   V + EL++  GE    R++S 
Sbjct: 61  YPVKFSVNEALAKENRLTLEAKLISDRT-LGDTVIGTVHVPLRELVDNPGEDNGFRHVSY 120

Query: 121 PIMDTLGQTTNARLNFIIKFNKIELHGSVTGEKISHLNEKVD 163
            ++ + G++  +  NF  KF + ++  SV   ++S    K +
Sbjct: 121 KVVKSSGKSKGS-FNFSYKFAE-KVSNSVAAGRLSATASKAE 157

[Close]

BLAST of Csa6G194680 vs. TAIR10
Match: AT1G09070.1 (AT1G09070.1 soybean gene regulated by cold-2)

HSP 1 Score: 65.9 bits (159), Expect = 4.2e-11
Identity = 51/154 (33.12%), Postives = 75/154 (48.70%), Query Frame = 1


Query: 1   MDLMSLEMCVESAEDLKKFDDDLSSKMKVYVVVSVTSGVFSEQRAQTNVDMEGGENPRWN 60
           M+  SL++ + SAEDLK  D  L  K  +Y VVS+     ++Q  +T VD + G  P+W 
Sbjct: 1   MECRSLDLTIISAEDLK--DVQLIGKQDLYAVVSINGDARTKQ--KTKVDKDCGTKPKWK 60

Query: 61  FPMKFLIDLNAAKQDLKSLLTFTIKSETPQV-HKSIGETKVRIVELLE--TVGEQKSMRY 120
             MK  +D +AA +D +  L F I ++ P    K +GE  V + ELL+     E+K++ Y
Sbjct: 61  HQMKLTVD-DAAARDNRLTLVFEIVADRPIAGDKPVGEVSVPVKELLDQNKGDEEKTVTY 120

Query: 121 ISRPIMDTLGQTTNARLNFIIKFNKIELHGSVTG 152
             R             L F  KF +   +GS +G
Sbjct: 121 AVR----LPNGKAKGSLKFSFKFGEKYTYGSSSG 145

[Close]

BLAST of Csa6G194680 vs. TAIR10
Match: AT4G15740.1 (AT4G15740.1 Calcium-dependent lipid-binding (CaLB domain) family protein)

HSP 1 Score: 59.3 bits (142), Expect = 4.0e-09
Identity = 46/155 (29.68%), Postives = 74/155 (47.74%), Query Frame = 1


Query: 1   MDLMSLEMCVESAEDLKKFDDDLSSKMKVYVVVSVTSGVFSE-QRAQTNVDMEGGENPRW 60
           M+  +LE+ + SA D+   D   + KM VY VVS+      + Q A+T +D +GG NP W
Sbjct: 36  MENPTLELKIVSASDVNHID--ATDKMDVYAVVSINGDTTQQKQAAKTPIDYDGGSNPTW 95

Query: 61  NFPMKFLIDLNAAKQDLKSLLTFTIKSETPQVHKS----IGETKVRIVELLE-------T 120
           N  +KF ++   A +    LLT T+K  +  +       +GE  V + +LL        T
Sbjct: 96  NHTVKFSVNEREANE---GLLTITVKLFSYWLEGDNDLYLGEVNVSVQDLLASNPIPPFT 155

Query: 121 VGEQKSMRYISRPIMDTLGQTTNARLNFIIKFNKI 144
            G    M+ ++ PI  T  ++TN  ++   +F  +
Sbjct: 156 NGNINKMKSMTCPIKAT-EKSTNTTVSLSYRFKPV 184

HSP 2 Score: 40.8 bits (94), Expect = 1.5e-03
Identity = 29/101 (28.71%), Postives = 47/101 (46.53%), Query Frame = 1


Query: 6   LEMCVESAEDLKKFDDDLSSKMKVYVVVSVTSGVFSEQRAQTNVDMEGGENPRWNFPMKF 65
           LE+ ++ A++++  D +  S M VY  V++      + R  T V      NP+WN  MKF
Sbjct: 232 LELVIKFAKNIE--DVNAFSSMDVYASVAILKDRKVKNRINTPVAFAAYTNPKWNQMMKF 291

Query: 66  LIDLNAAKQDLKSLLTFTIKSETPQVHKSIGETKVRIVELL 107
            ID  +A++    LL   +        K IG  ++ + +LL
Sbjct: 292 SIDEKSAQEGRLMLLVELMSHRPFLGDKEIGFVRLPMQQLL 330

[Close]

BLAST of Csa6G194680 vs. TAIR10
Match: AT4G15755.1 (AT4G15755.1 Calcium-dependent lipid-binding (CaLB domain) family protein)

HSP 1 Score: 57.4 bits (137), Expect = 1.5e-08
Identity = 41/145 (28.28%), Postives = 72/145 (49.66%), Query Frame = 1


Query: 4   MSLEMCVESAEDLKKFDDDLSSKMKVYVVVSVTS-GVFSEQRAQTNVDMEGGENPRWNFP 63
           ++LE+ + SA +L   + +L +KM V+  +++       +Q+A+T VD  GG NP WN  
Sbjct: 4   LTLELNINSARNL--LNVNLITKMNVFTAITINGENTRKKQKAKTTVDRYGGSNPTWNQT 63

Query: 64  MKFLIDLNAAKQDLKSLLTFTIKSETPQVHKSIGETKVRIVELLETV-------GEQKSM 123
           +KF +D  +A+    SL+   I S     +K IG   + ++ELL          G    M
Sbjct: 64  IKFSVDERSARGGHSSLVMRVI-SRRVLGNKEIGRVNIPLLELLNATTPSFNGDGNDHEM 123

Query: 124 RYISRPIMDTLGQTTNARLNFIIKF 141
           + +S  +  + G+ + + L+F  +F
Sbjct: 124 KLMSYQVRTSSGKRSGS-LSFSYRF 144

[Close]

BLAST of Csa6G194680 vs. NCBI nr
Match: gi|700191980|gb|KGN47184.1| (hypothetical protein Csa_6G194680 [Cucumis sativus])

HSP 1 Score: 492.7 bits (1267), Expect = 4.0e-136
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 1


Query: 1   MDLMSLEMCVESAEDLKKFDDDLSSKMKVYVVVSVTSGVFSEQRAQTNVDMEGGENPRWN 60
           MDLMSLEMCVESAEDLKKFDDDLSSKMKVYVVVSVTSGVFSEQRAQTNVDMEGGENPRWN
Sbjct: 1   MDLMSLEMCVESAEDLKKFDDDLSSKMKVYVVVSVTSGVFSEQRAQTNVDMEGGENPRWN 60

Query: 61  FPMKFLIDLNAAKQDLKSLLTFTIKSETPQVHKSIGETKVRIVELLETVGEQKSMRYISR 120
           FPMKFLIDLNAAKQDLKSLLTFTIKSETPQVHKSIGETKVRIVELLETVGEQKSMRYISR
Sbjct: 61  FPMKFLIDLNAAKQDLKSLLTFTIKSETPQVHKSIGETKVRIVELLETVGEQKSMRYISR 120

Query: 121 PIMDTLGQTTNARLNFIIKFNKIELHGSVTGEKISHLNEKVDQNENVKNNTASSEVAQDV 180
           PIMDTLGQTTNARLNFIIKFNKIELHGSVTGEKISHLNEKVDQNENVKNNTASSEVAQDV
Sbjct: 121 PIMDTLGQTTNARLNFIIKFNKIELHGSVTGEKISHLNEKVDQNENVKNNTASSEVAQDV 180

Query: 181 AMKLTMCVVEGGVTGVSNVVAENLMKEFVEGSSSDTTATSIVETETFSDTSVVDESIDDS 240
           AMKLTMCVVEGGVTGVSNVVAENLMKEFVEGSSSDTTATSIVETETFSDTSVVDESIDDS
Sbjct: 181 AMKLTMCVVEGGVTGVSNVVAENLMKEFVEGSSSDTTATSIVETETFSDTSVVDESIDDS 240

Query: 241 SSFLDIIYFFFFC 254
           SSFLDIIYFFFFC
Sbjct: 241 SSFLDIIYFFFFC 253

[Close]

BLAST of Csa6G194680 vs. NCBI nr
Match: gi|659117168|ref|XP_008458457.1| (PREDICTED: uncharacterized protein LOC103497859 isoform X1 [Cucumis melo])

HSP 1 Score: 339.3 bits (869), Expect = 5.6e-90
Identity = 189/254 (74.41%), Postives = 214/254 (84.25%), Query Frame = 1


Query: 1   MDLMSLEMCVESAEDLKKFDDDLSSKMKVYVVVSVTSGVFSEQRAQTNVDMEGGENPRWN 60
           MDL+SLE+ V+SAE+LKK DD LSSKMKVYVVVSVTSGVFSEQRAQTNVDMEGGENPRWN
Sbjct: 1   MDLLSLEISVDSAENLKKLDD-LSSKMKVYVVVSVTSGVFSEQRAQTNVDMEGGENPRWN 60

Query: 61  FPMKFLIDLNAAKQDLKSLLTFTIKSETPQVHKSIGETKVRIVELLETVGEQKSMRYISR 120
           FPM FLIDLNAAKQDL SLLTFTIKSETPQVHKSIGE KVRI+EL E+VG++ SMRY SR
Sbjct: 61  FPMNFLIDLNAAKQDLNSLLTFTIKSETPQVHKSIGEIKVRILELFESVGDKNSMRYTSR 120

Query: 121 PIMDTLGQTTNARLNFIIKFNKIELHGSVTGEKISHLNEKVDQNENVKNNTASSEVAQDV 180
           PI +TLGQTTNARLNFI KF +++L GSVT  +IS   E+V +N NVKNN   SEVA+D+
Sbjct: 121 PITNTLGQTTNARLNFIFKFRELKLQGSVTSGEIS---EEV-ENGNVKNN-MGSEVAKDM 180

Query: 181 AMKLTMCVVEGGVTGVSNVVAENLMKEFVEGSSSDTTA--TSIVETETFSDTSV-VDESI 240
           AMK T  VV GGVTGVSNVVA NLMK+++E   SD  A  ++ +ET+TFSDTSV VD+SI
Sbjct: 181 AMKSTTGVVMGGVTGVSNVVAANLMKQYLESMGSDKAAATSTTIETQTFSDTSVDVDQSI 240

Query: 241 DDSSSFLDIIYFFF 252
           DDSSSF DII  FF
Sbjct: 241 DDSSSFFDIICSFF 248

[Close]

BLAST of Csa6G194680 vs. NCBI nr
Match: gi|659117170|ref|XP_008458458.1| (PREDICTED: uncharacterized protein LOC103497859 isoform X2 [Cucumis melo])

HSP 1 Score: 320.1 bits (819), Expect = 3.5e-84
Identity = 183/254 (72.05%), Postives = 208/254 (81.89%), Query Frame = 1


Query: 1   MDLMSLEMCVESAEDLKKFDDDLSSKMKVYVVVSVTSGVFSEQRAQTNVDMEGGENPRWN 60
           MDL+SLE+ V+SAE+LKK DD LSSKMKVYVVVSVTSGVFSEQRAQTNVDMEGGENPRWN
Sbjct: 1   MDLLSLEISVDSAENLKKLDD-LSSKMKVYVVVSVTSGVFSEQRAQTNVDMEGGENPRWN 60

Query: 61  FPMKFLIDLNAAKQDLKSLLTFTIKSETPQVHKSIGETKVRIVELLETVGEQKSMRYISR 120
           FPM FLIDLNAAKQDL SLLTFTIKSETPQVHKSIGE KVRI+EL E+VG++ SMRY SR
Sbjct: 61  FPMNFLIDLNAAKQDLNSLLTFTIKSETPQVHKSIGEIKVRILELFESVGDKNSMRYTSR 120

Query: 121 PIMDTLGQTTNARLNFIIKFNKIELHGSVTGEKISHLNEKVDQNENVKNNTASSEVAQDV 180
           PI +TLGQTTNAR        +++L GSVT  +IS   E+V +N NVKNN   SEVA+D+
Sbjct: 121 PITNTLGQTTNAR--------ELKLQGSVTSGEIS---EEV-ENGNVKNN-MGSEVAKDM 180

Query: 181 AMKLTMCVVEGGVTGVSNVVAENLMKEFVEGSSSDTTA--TSIVETETFSDTSV-VDESI 240
           AMK T  VV GGVTGVSNVVA NLMK+++E   SD  A  ++ +ET+TFSDTSV VD+SI
Sbjct: 181 AMKSTTGVVMGGVTGVSNVVAANLMKQYLESMGSDKAAATSTTIETQTFSDTSVDVDQSI 240

Query: 241 DDSSSFLDIIYFFF 252
           DDSSSF DII  FF
Sbjct: 241 DDSSSFFDIICSFF 240

[Close]

BLAST of Csa6G194680 vs. NCBI nr
Match: gi|225432286|ref|XP_002272904.1| (PREDICTED: cytokinesis protein sepA-like [Vitis vinifera])

HSP 1 Score: 99.4 bits (246), Expect = 9.8e-18
Identity = 63/150 (42.00%), Postives = 89/150 (59.33%), Query Frame = 1


Query: 1   MDLMSLEMCVESAEDLKKFDDDLSSKMKVYVVVSVTSGVFSEQRAQTNVDMEGGENPRWN 60
           M+  +LE+ V SA+DLK  D +L SKM VYVVVS+     S+Q+  T VD +GG NP WN
Sbjct: 1   MEYRTLEINVISAKDLK--DVNLISKMDVYVVVSINGDSRSKQK--TPVDRDGGTNPTWN 60

Query: 61  FPMKFLIDLNAAKQDLKSLLTFTIKSETPQVHKSIGETKVRIVELLETVGEQKSMRYISR 120
           FPMKF +D +AA+Q+ +  L+F ++ E     K IGE  V I ELL+  GE K ++++S 
Sbjct: 61  FPMKFTVDESAAQQN-RLTLSFKLRCERTLGDKDIGEVNVPIKELLDPAGESKPIQFVSY 120

Query: 121 PIMDTLGQTTNARLNFIIKFNKIELHGSVT 151
            +    G+     LN   KF +  +  S T
Sbjct: 121 QVRKPSGK-PKGELNLSYKFGEKSMSQSAT 144

[Close]

BLAST of Csa6G194680 vs. NCBI nr
Match: gi|224110568|ref|XP_002315561.1| (shock protein SRC2 [Populus trichocarpa])

HSP 1 Score: 97.1 bits (240), Expect = 4.9e-17
Identity = 64/148 (43.24%), Postives = 89/148 (60.14%), Query Frame = 1


Query: 1   MDLMSLEMCVESAEDLKKFDDDLSSKMKVYVVVSVTSGVFSEQ----RAQTNVDMEGGEN 60
           MD  +LE+ V SA DLK  D +  SKM VY VVS+ SGV S+Q    + +T VD +GG+N
Sbjct: 1   MDQRTLEINVISARDLK--DVNYISKMDVYAVVSI-SGVDSKQQPKQKTKTPVDRDGGKN 60

Query: 61  PRWNFPMKFLIDLNAAKQDLKSLLTFTIKSETPQVHKSIGETKVRIVELLETVGEQKSMR 120
           P WNFP+KF I   +  ++  SL+ F +K E     K IGE  V I ELL++ G+ KSM+
Sbjct: 61  PTWNFPIKFTIPETSLAENHLSLV-FKLKCERALGDKDIGEVNVPIKELLDSAGDGKSMK 120

Query: 121 YISRPIMDTLGQTTNARLNFIIKFNKIE 145
           ++S  +    G+     +NF  KF +IE
Sbjct: 121 FVSYQVRKPSGK-PKGEINFSFKFGEIE 143

The following BLAST results are available for this feature:

BLAST of Csa6G194680 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SRC2_ARATH	7.5e-10	33.12	Protein SRC2 homolog OS=Arabidopsis thaliana GN=SRC2 PE=1 SV=1	[more]

BLAST of Csa6G194680 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KEB7_CUCSA	2.8e-136	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G194680 PE=4 SV=1	[more]
F6HE67_VITVI	6.8e-18	42.00	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01400 PE=4 SV=...	[more]
B9HSC2_POPTR	3.4e-17	43.24	Shock protein SRC2 OS=Populus trichocarpa GN=POPTR_0010s02500g PE=4 SV=1	[more]
A0A067JYD4_JATCU	1.3e-16	41.21	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18863 PE=4 SV=1	[more]
A0A0S3RIE2_PHAAN	1.7e-13	33.95	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G325100 PE=...	[more]

BLAST of Csa6G194680 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G09070.1	4.2e-11	33.12	soybean gene regulated by cold-2	[more]
AT4G15740.1	4.0e-09	29.68	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]
AT4G15755.1	1.5e-08	28.28	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]

BLAST of Csa6G194680 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700191980\|gb\|KGN47184.1\|	4.0e-136	100.00	hypothetical protein Csa_6G194680 [Cucumis sativus]	[more]
gi\|659117168\|ref\|XP_008458457.1\|	5.6e-90	74.41	PREDICTED: uncharacterized protein LOC103497859 isoform X1 [Cucumis melo]	[more]
gi\|659117170\|ref\|XP_008458458.1\|	3.5e-84	72.05	PREDICTED: uncharacterized protein LOC103497859 isoform X2 [Cucumis melo]	[more]
gi\|225432286\|ref\|XP_002272904.1\|	9.8e-18	42.00	PREDICTED: cytokinesis protein sepA-like [Vitis vinifera]	[more]
gi\|224110568\|ref\|XP_002315561.1\|	4.9e-17	43.24	shock protein SRC2 [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000008	C2_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006811	ion transport
biological_process	GO:0071705	nitrogen compound transport
biological_process	GO:0071702	organic substance transport
biological_process	GO:0050896	response to stimulus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa6G194680.1	Csa6G194680.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000008	C2 domain	GENE3D	G3DSA:2.60.40.150		coord: 6..116 score: 1.
IPR000008	C2 domain	PFAM	PF00168	C2	coord: 5..109 score: 5.
IPR000008	C2 domain	SMART	SM00239	C2_3c	coord: 5..114 score: 1.
IPR000008	C2 domain	unknown	SSF49562	C2 domain (Calcium/lipid-binding domain, CaLB)	coord: 5..109 score: 4.21
None	No IPR available	PANTHER	PTHR32246	FAMILY NOT NAMED	coord: 1..142 score: 1.1
None	No IPR available	PANTHER	PTHR32246:SF18	C2 DOMAIN-CONTAINING PROTEIN-RELATED	coord: 1..142 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa6G194680	Lsi09G014210	Bottle gourd (USVL1VR-Ls)	culsiB404
Csa6G194680	Bhi01G000707	Wax gourd	cuwgoB559
Csa6G194680	Bhi12G001838	Wax gourd	cuwgoB537
Csa6G194680	CSPI06G14780	Wild cucumber (PI 183967)	cpicuB314
Csa6G194680	Cucsa.172210	Cucumber (Gy14) v1	cgycuB262
Csa6G194680	CmaCh08G012220	Cucurbita maxima (Rimu)	cmacuB907
Csa6G194680	CmoCh08G011950	Cucurbita moschata (Rifu)	cmocuB893
Csa6G194680	Cp4.1LG17g00890	Cucurbita pepo (Zucchini)	cpecuB326
Csa6G194680	CsGy6G014640	Cucumber (Gy14) v2	cgybcuB282
Csa6G194680	Carg18837	Silver-seed gourd	carcuB0725

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Csa6G194680	Csa3G153730	Cucumber (Chinese Long) v2	cucuB123

The following block(s) are covering this gene:


Gene	Organism	Block
Csa6G194680	Cucurbita pepo (Zucchini)	cpecuB153
Csa6G194680	Bottle gourd (USVL1VR-Ls)	culsiB466
Csa6G194680	Melon (DHL92) v3.6.1	cumedB428
Csa6G194680	Melon (DHL92) v3.6.1	cumedB479
Csa6G194680	Silver-seed gourd	carcuB0080
Csa6G194680	Watermelon (97103) v2	cuwmbB467
Csa6G194680	Watermelon (97103) v2	cuwmbB470
Csa6G194680	Cucumber (Gy14) v1	cgycuB373
Csa6G194680	Cucurbita maxima (Rimu)	cmacuB381
Csa6G194680	Cucurbita maxima (Rimu)	cmacuB846
Csa6G194680	Cucurbita moschata (Rifu)	cmocuB371
Csa6G194680	Melon (DHL92) v3.5.1	cumeB447
Csa6G194680	Melon (DHL92) v3.5.1	cumeB499
Csa6G194680	Watermelon (Charleston Gray)	cuwcgB478
Csa6G194680	Watermelon (97103) v1	cuwmB499
Csa6G194680	Watermelon (97103) v1	cuwmB541