Csa6G194140 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G194140
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 12603826 .. 12604079 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTTCGGGTAATGCTCTATTGGCTTGGAACATTCGTTATACATTGAGGAGTTTTGGTTTGTTTGTTGTTAAGGCTCCCATGTTGTATAAGGTGGTGAGTTAGTCGAGTCATGGGATTGTGGTCTCCTTCTCGTTTTAATCATTGGAAGATAAAATGTTGATGTCTCACTGGTCGATTGTGTTGAGTATGGTGGTATCAACTGGGTTGCCTGTGACTCTGTTGGGTCTCTCATTCTTGTTGTGTGTGAATAG

mRNA sequence

ATGTTTTCGGGTAATGCTCTATTGGCTTGGAACATTCGTTATACATTGAGGAGTTTTGGTTTGTTTGTTGTTAAGGCTCCCATGTTGTATAAGGTGTATGGTGGTATCAACTGGGTTGCCTGTGACTCTGTTGGGTCTCTCATTCTTGTTGTGTGTGAATAG

Coding sequence (CDS)

ATGTTTTCGGGTAATGCTCTATTGGCTTGGAACATTCGTTATACATTGAGGAGTTTTGGTTTGTTTGTTGTTAAGGCTCCCATGTTGTATAAGGTGTATGGTGGTATCAACTGGGTTGCCTGTGACTCTGTTGGGTCTCTCATTCTTGTTGTGTGTGAATAG

Protein sequence

MFSGNALLAWNIRYTLRSFGLFVVKAPMLYKVYGGINWVACDSVGSLILVVCE*
Homology
[Close]
BLAST of Csa6G194140 vs. TrEMBL
Match: A0A0A0KEB3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G194140 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 1.7e-22
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 1 

Query: 1  MFSGNALLAWNIRYTLRSFGLFVVKAPMLYKVYGGINWVACDSVGSLILVVCE 54
          MFSGNALLAWNIRYTLRSFGLFVVKAPMLYKVYGGINWVACDSVGSLILVVCE
Sbjct: 1  MFSGNALLAWNIRYTLRSFGLFVVKAPMLYKVYGGINWVACDSVGSLILVVCE 53

[Close]
BLAST of Csa6G194140 vs. NCBI nr
Match: gi|700191975|gb|KGN47179.1| (hypothetical protein Csa_6G194140 [Cucumis sativus])

HSP 1 Score: 112.5 bits (280), Expect = 2.4e-22
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 1 

Query: 1  MFSGNALLAWNIRYTLRSFGLFVVKAPMLYKVYGGINWVACDSVGSLILVVCE 54
          MFSGNALLAWNIRYTLRSFGLFVVKAPMLYKVYGGINWVACDSVGSLILVVCE
Sbjct: 1  MFSGNALLAWNIRYTLRSFGLFVVKAPMLYKVYGGINWVACDSVGSLILVVCE 53

The following BLAST results are available for this feature:
BLAST of Csa6G194140 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KEB3_CUCSA1.7e-22100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G194140 PE=4 SV=1[more]
BLAST of Csa6G194140 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700191975|gb|KGN47179.1|2.4e-22100.00hypothetical protein Csa_6G194140 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G194140.1Csa6G194140.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa6G194140Silver-seed gourdcarcuB0080
Csa6G194140Silver-seed gourdcarcuB0725
Csa6G194140Watermelon (97103) v2cuwmbB470
Csa6G194140Wax gourdcuwgoB537
Csa6G194140Cucumber (Gy14) v1cgycuB262
Csa6G194140Cucurbita maxima (Rimu)cmacuB381
Csa6G194140Cucurbita maxima (Rimu)cmacuB907
Csa6G194140Cucurbita moschata (Rifu)cmocuB371
Csa6G194140Cucurbita moschata (Rifu)cmocuB893
Csa6G194140Melon (DHL92) v3.5.1cumeB447
Csa6G194140Watermelon (Charleston Gray)cuwcgB478
Csa6G194140Watermelon (97103) v1cuwmB541
Csa6G194140Cucurbita pepo (Zucchini)cpecuB153
Csa6G194140Cucurbita pepo (Zucchini)cpecuB326
Csa6G194140Bottle gourd (USVL1VR-Ls)culsiB404
Csa6G194140Cucumber (Gy14) v2cgybcuB282
Csa6G194140Melon (DHL92) v3.6.1cumedB428