Csa6G191580 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa6G191580
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Histone H4; contains IPR001951 (Histone H4), IPR009072 (Histone-fold)
Location	Chr6 : 12551626 .. 12552698 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCGAATGAAACATAAAGAAACAAAGCTTCAAATTTCCCCTTAAATAAATTTCCCTAATCCCCACCCCTCGCCACCAACATCAAATTTTAAGATCCACCCTTTAGCGATTCGTTCCCCAATTTTCAGTTGAAGCAATGTCTGGACGAGGTAAGGGAGGCAAGGGATTGGGAAAAGGAGGAGCAAAGCGTCACAGGAAGGTTTTGCGAGATAACATTCAGGGCATTACAAAGCCTGCTATTCGTCGTTTGGCTCGTAGAGGTGGTGTGAAGCGTATCAGTGGATTGATCTATGAAGAAACCAGAGGGGTTTTGAAGATTTTCCTTGAGAATGTGATTCGTGATGCTGTTACCTACACAGAGCACGCCAGGAGAAAGACGGTGACTGCCATGGATGTGGTTTATGCTTTGAAAAGGCAGGGAAGAACCTTGTATGGTTTTGGAGGTTAGGTTGATTGTACGAATGATTGTATATCTGGGGTTTGGATTTAACGTCATTGATGTTCATGTTCATGTTCTGTTAGAGAAATTTGGAAGTAATTTACTGTTCTTGCAATGAAATTATAGTTAATCATGTACTTACTGTCTTCAGTTTCTTTTTACTTTATATATGAATATTTACTGAGCATTGATCATTGGGTAGAAAGTATATAACTATTTGGCTTGTTGTAATGTTTTATTCATAGAAACGACGATAAAAAACAAATTAATAGTTCACGCTAGAAGGATATCACATTTTTTTTTCTTTCGATTTCCTGATGCTAATTTGTTGGGTGACTTTGTAGTTATTACTATCTCAATTAATTTTGTTTTTATGTTTGAATCTTGATCATTAACTATATATATTCTTCGAGACTTGGATGTATTTATGGAACAAACCCGATCCAACTTTGGATCGAAGAAGCCATGTAACACCCAATTTCTTAAATTATTTACGTTTTAGTATATGAACTAAATAAATTGATTGGTGGGTAATGTAGCTTCTCTTCAAGAAAAACTAAATGATTACAACCCCGCTTCTGCTTGATAGCTATGAATAATCTGAGTCCTTAAAAGAGATAGAATGTGAAGGTTGA

mRNA sequence

ATGTCTGGACGAGGTAAGGGAGGCAAGGGATTGGGAAAAGGAGGAGCAAAGCGTCACAGGAAGGTTTTGCGAGATAACATTCAGGGCATTACAAAGCCTGCTATTCGTCGTTTGGCTCGTAGAGGTGGTGTGAAGCGTATCAGTGGATTGATCTATGAAGAAACCAGAGGGGTTTTGAAGATTTTCCTTGAGAATGTGATTCGTGATGCTGTTACCTACACAGAGCACGCCAGGAGAAAGACGGTGACTGCCATGGATGTGGTTTATGCTTTGAAAAGGCAGGGAAGAACCTTGTATGGTTTTGGAGGTTAG

Coding sequence (CDS)

ATGTCTGGACGAGGTAAGGGAGGCAAGGGATTGGGAAAAGGAGGAGCAAAGCGTCACAGGAAGGTTTTGCGAGATAACATTCAGGGCATTACAAAGCCTGCTATTCGTCGTTTGGCTCGTAGAGGTGGTGTGAAGCGTATCAGTGGATTGATCTATGAAGAAACCAGAGGGGTTTTGAAGATTTTCCTTGAGAATGTGATTCGTGATGCTGTTACCTACACAGAGCACGCCAGGAGAAAGACGGTGACTGCCATGGATGTGGTTTATGCTTTGAAAAGGCAGGGAAGAACCTTGTATGGTTTTGGAGGTTAG

Protein sequence

MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG*

Homology

[Close]

BLAST of Csa6G191580 vs. Swiss-Prot
Match: H4_EUCGL (Histone H4 OS=Eucalyptus globulus PE=3 SV=3)

HSP 1 Score: 206.1 bits (523), Expect = 1.9e-52
Identity = 103/103 (100.00%), Postives = 101/103 (98.06%), Query Frame = 1


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]

BLAST of Csa6G191580 vs. Swiss-Prot
Match: H4_CHEMJ (Histone H4 OS=Chelidonium majus PE=3 SV=3)

HSP 1 Score: 206.1 bits (523), Expect = 1.9e-52
Identity = 103/103 (100.00%), Postives = 101/103 (98.06%), Query Frame = 1


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]

BLAST of Csa6G191580 vs. Swiss-Prot
Match: H4_ARATH (Histone H4 OS=Arabidopsis thaliana GN=At1g07660 PE=1 SV=2)

HSP 1 Score: 206.1 bits (523), Expect = 1.9e-52
Identity = 103/103 (100.00%), Postives = 101/103 (98.06%), Query Frame = 1


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]

BLAST of Csa6G191580 vs. Swiss-Prot
Match: H41_WHEAT (Histone H4 variant TH011 OS=Triticum aestivum PE=3 SV=2)

HSP 1 Score: 206.1 bits (523), Expect = 1.9e-52
Identity = 103/103 (100.00%), Postives = 101/103 (98.06%), Query Frame = 1


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]

BLAST of Csa6G191580 vs. Swiss-Prot
Match: H4_PEA (Histone H4 OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 206.1 bits (523), Expect = 1.9e-52
Identity = 103/103 (100.00%), Postives = 101/103 (98.06%), Query Frame = 1


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]

BLAST of Csa6G191580 vs. TrEMBL
Match: Q6NR90_ARATH (Histone H4 OS=Arabidopsis thaliana GN=At1g07660 PE=2 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 2.1e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]

BLAST of Csa6G191580 vs. TrEMBL
Match: L0P1L9_9POAL (Histone H4 OS=Phyllostachys edulis GN=PH01B001I13.20 PE=3 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 2.1e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]

BLAST of Csa6G191580 vs. TrEMBL
Match: A0A0B2SBA2_GLYSO (Histone H4 OS=Glycine soja GN=glysoja_005470 PE=3 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 2.1e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]

BLAST of Csa6G191580 vs. TrEMBL
Match: A0A0A0LSH2_CUCSA (Histone H4 OS=Cucumis sativus GN=Csa_1G084320 PE=3 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 2.1e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]

BLAST of Csa6G191580 vs. TrEMBL
Match: A0A0D3C2P6_BRAOL (Histone H4 OS=Brassica oleracea var. oleracea PE=3 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 2.1e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]

BLAST of Csa6G191580 vs. TAIR10
Match: AT1G07660.1 (AT1G07660.1 Histone superfamily protein)

HSP 1 Score: 206.1 bits (523), Expect = 1.1e-53
Identity = 103/103 (100.00%), Postives = 101/103 (98.06%), Query Frame = 1


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]

BLAST of Csa6G191580 vs. TAIR10
Match: AT1G07820.1 (AT1G07820.1 Histone superfamily protein)

HSP 1 Score: 206.1 bits (523), Expect = 1.1e-53
Identity = 103/103 (100.00%), Postives = 101/103 (98.06%), Query Frame = 1


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]

BLAST of Csa6G191580 vs. TAIR10
Match: AT2G28740.1 (AT2G28740.1 histone H4)

HSP 1 Score: 206.1 bits (523), Expect = 1.1e-53
Identity = 103/103 (100.00%), Postives = 101/103 (98.06%), Query Frame = 1


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]

BLAST of Csa6G191580 vs. TAIR10
Match: AT3G45930.1 (AT3G45930.1 Histone superfamily protein)

HSP 1 Score: 206.1 bits (523), Expect = 1.1e-53
Identity = 103/103 (100.00%), Postives = 101/103 (98.06%), Query Frame = 1


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]

BLAST of Csa6G191580 vs. TAIR10
Match: AT3G53730.1 (AT3G53730.1 Histone superfamily protein)

HSP 1 Score: 206.1 bits (523), Expect = 1.1e-53
Identity = 103/103 (100.00%), Postives = 101/103 (98.06%), Query Frame = 1


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]

BLAST of Csa6G191580 vs. NCBI nr
Match: gi|976922550|gb|KVI06931.1| (Histone core [Cynara cardunculus var. scolymus])

HSP 1 Score: 206.1 bits (523), Expect = 3.0e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 107 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 166

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 167 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 209

[Close]

BLAST of Csa6G191580 vs. NCBI nr
Match: gi|629086337|gb|KCW52694.1| (hypothetical protein EUGRSUZ_J02062, partial [Eucalyptus grandis])

HSP 1 Score: 206.1 bits (523), Expect = 3.0e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 4   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 63

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 64  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 106

[Close]

BLAST of Csa6G191580 vs. NCBI nr
Match: gi|413947466|gb|AFW80115.1| (hypothetical protein ZEAMMB73_313798 [Zea mays])

HSP 1 Score: 206.1 bits (523), Expect = 3.0e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 119 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 178

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 179 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 221

[Close]

BLAST of Csa6G191580 vs. NCBI nr
Match: gi|960491942|ref|XP_014751185.1| (PREDICTED: uncharacterized protein LOC100841093 [Brachypodium distachyon])

HSP 1 Score: 206.1 bits (523), Expect = 3.0e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 152 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 211

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 212 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 254

HSP 2 Score: 206.1 bits (523), Expect = 3.0e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 29  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 88

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 89  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 131

The following BLAST results are available for this feature:

BLAST of Csa6G191580 vs. Swiss-Prot


Match Name	E-value	Identity	Description
H4_EUCGL	1.9e-52	100.00	Histone H4 OS=Eucalyptus globulus PE=3 SV=3	[more]
H4_CHEMJ	1.9e-52	100.00	Histone H4 OS=Chelidonium majus PE=3 SV=3	[more]
H4_ARATH	1.9e-52	100.00	Histone H4 OS=Arabidopsis thaliana GN=At1g07660 PE=1 SV=2	[more]
H41_WHEAT	1.9e-52	100.00	Histone H4 variant TH011 OS=Triticum aestivum PE=3 SV=2	[more]
H4_PEA	1.9e-52	100.00	Histone H4 OS=Pisum sativum PE=1 SV=2	[more]

BLAST of Csa6G191580 vs. TrEMBL


Match Name	E-value	Identity	Description
Q6NR90_ARATH	2.1e-50	100.00	Histone H4 OS=Arabidopsis thaliana GN=At1g07660 PE=2 SV=1	[more]
L0P1L9_9POAL	2.1e-50	100.00	Histone H4 OS=Phyllostachys edulis GN=PH01B001I13.20 PE=3 SV=1	[more]
A0A0B2SBA2_GLYSO	2.1e-50	100.00	Histone H4 OS=Glycine soja GN=glysoja_005470 PE=3 SV=1	[more]
A0A0A0LSH2_CUCSA	2.1e-50	100.00	Histone H4 OS=Cucumis sativus GN=Csa_1G084320 PE=3 SV=1	[more]
A0A0D3C2P6_BRAOL	2.1e-50	100.00	Histone H4 OS=Brassica oleracea var. oleracea PE=3 SV=1	[more]

BLAST of Csa6G191580 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G07660.1	1.1e-53	100.00	Histone superfamily protein	[more]
AT1G07820.1	1.1e-53	100.00	Histone superfamily protein	[more]
AT2G28740.1	1.1e-53	100.00	histone H4	[more]
AT3G45930.1	1.1e-53	100.00	Histone superfamily protein	[more]
AT3G53730.1	1.1e-53	100.00	Histone superfamily protein	[more]

BLAST of Csa6G191580 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|976922550\|gb\|KVI06931.1\|	3.0e-50	100.00	Histone core [Cynara cardunculus var. scolymus]	[more]
gi\|629086337\|gb\|KCW52694.1\|	3.0e-50	100.00	hypothetical protein EUGRSUZ_J02062, partial [Eucalyptus grandis]	[more]
gi\|413947466\|gb\|AFW80115.1\|	3.0e-50	100.00	hypothetical protein ZEAMMB73_313798 [Zea mays]	[more]
gi\|960491942\|ref\|XP_014751185.1\|	3.0e-50	100.00	PREDICTED: uncharacterized protein LOC100841093 [Brachypodium distachyon]	[more]
gi\|960491942\|ref\|XP_014751185.1\|	3.0e-50	100.00	PREDICTED: uncharacterized protein LOC100841093 [Brachypodium distachyon]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006334	nucleosome assembly
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0009579	thylakoid
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046982	protein heterodimerization activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU099713	cucumber EST collection version 3.0	transcribed_cluster
CU100169	cucumber EST collection version 3.0	transcribed_cluster
CU100324	cucumber EST collection version 3.0	transcribed_cluster
CU100333	cucumber EST collection version 3.0	transcribed_cluster
CU100796	cucumber EST collection version 3.0	transcribed_cluster
CU105939	cucumber EST collection version 3.0	transcribed_cluster
CU107395	cucumber EST collection version 3.0	transcribed_cluster
CU134094	cucumber EST collection version 3.0	transcribed_cluster
CU139322	cucumber EST collection version 3.0	transcribed_cluster
CU155363	cucumber EST collection version 3.0	transcribed_cluster
CU164539	cucumber EST collection version 3.0	transcribed_cluster
CU176096	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa6G191580.1	Csa6G191580.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU105939	CU105939	transcribed_cluster
CU107395	CU107395	transcribed_cluster
CU176096	CU176096	transcribed_cluster
CU100796	CU100796	transcribed_cluster
CU100333	CU100333	transcribed_cluster
CU134094	CU134094	transcribed_cluster
CU099713	CU099713	transcribed_cluster
CU100169	CU100169	transcribed_cluster
CU100324	CU100324	transcribed_cluster
CU164539	CU164539	transcribed_cluster
CU155363	CU155363	transcribed_cluster
CU139322	CU139322	transcribed_cluster

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa6G191580	Melon (DHL92) v3.6.1	cumedB423
Csa6G191580	Melon (DHL92) v3.6.1	cumedB468
Csa6G191580	Silver-seed gourd	carcuB0182
Csa6G191580	Silver-seed gourd	carcuB0335
Csa6G191580	Silver-seed gourd	carcuB0370
Csa6G191580	Watermelon (97103) v2	cuwmbB422
Csa6G191580	Watermelon (97103) v2	cuwmbB427
Csa6G191580	Wax gourd	cuwgoB532
Csa6G191580	Wax gourd	cuwgoB605
Csa6G191580	Cucumber (Chinese Long) v2	cucuB116
Csa6G191580	Cucumber (Gy14) v1	cgycuB262
Csa6G191580	Cucumber (Gy14) v1	cgycuB273
Csa6G191580	Cucurbita maxima (Rimu)	cmacuB553
Csa6G191580	Cucurbita maxima (Rimu)	cmacuB617
Csa6G191580	Cucurbita moschata (Rifu)	cmocuB609
Csa6G191580	Melon (DHL92) v3.5.1	cumeB452
Csa6G191580	Melon (DHL92) v3.5.1	cumeB488
Csa6G191580	Watermelon (Charleston Gray)	cuwcgB437
Csa6G191580	Watermelon (97103) v1	cuwmB455
Csa6G191580	Watermelon (97103) v1	cuwmB512
Csa6G191580	Cucurbita pepo (Zucchini)	cpecuB290
Csa6G191580	Cucurbita pepo (Zucchini)	cpecuB752
Csa6G191580	Cucurbita pepo (Zucchini)	cpecuB879
Csa6G191580	Bottle gourd (USVL1VR-Ls)	culsiB413
Csa6G191580	Cucumber (Gy14) v2	cgybcuB282