Csa6G190200 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTCGAATTGGCTATACCGCAAAATTTCCCTTACATTATCTCTGACGCCATTTCAAGATCTGTTTCTTATCCTTATATTTTCTTTTGTCGAAATCAACTAAAATCTTCAATATCCAATCGCCGGTTCTTCAGTTACCCGCTGTTGGCACCTCAGAGCTTTGAATCAAGTTACTTGACGTATCGTAGGAAGAGCTTTGTGACGCTTGTGAAAGCGAGTCGGAGAGAGTCACCGTACGAAGTGCTTGGTGTTTCTCCAACCGCAACTCCAAATGAAATCAAAAGGGCTTATCGGAAACTGGCTCTGAAGTATCATCCCGATGTTAATAAAGAGGTAATCGGGGAATTTCTGCCCTATTTCTTAATTTGCTTTTCTGGGTCTCTTTTGTAATCTGGTTGGAGTTTGGAAGTTAAGTTTCTTGATAAACTAATCTACGTAGGGAATTGCAGGAGAAAGTTTCAAGCTACTGAGATAGGGATTTCTGTTTTTTAAAAAAATGATCAATAAGTTGTGGAATCTGATCTACTATCTTTAGTTTGTGGGGGAAAGTCTAATTAACTAAGATGATTCAATGATTTTTTTTACCTCGCATTTAGCGAACTCAGTTCTTGTTATTTTAGAACTTAAAGATACTGTTGTACAACCTGTAGAACATATCTGTTCAAGTATGGTCGTAACTCGGTTCTTTTTCCTCCATGCTTGTTATCTTAAAACGAGTGCAACTTCAAATTTTCTATTGTTTCCAAAAGATGGAAATTGGTCCACGAAGAGACTAATTAATAAAGTCTATAAAAGTACCCATTTAACTTGGAAGGAAGACAGACTCGGTGGTACAGATTCCAAGCTCGCACGTCTAGTCTAGTCGGGTTATGCTTCTGTTATATATATATATTTAATGTAGTGGATGTTTTAGCTTTGACAGACATCTCTATCTGATGAGTTCTTTTAGTAATTATTTTGAGGTTGCTTTTTAATGTTTTACCTGAAATTGGGTGAAATGTTCATTAACCAATCTCTTTGTTTTTTGGTTAATTTTGTAGCCTAATGCACAGGAGAAATTTATGCGTATTAAACATGCATACAACACATTGCTGAATTCTGAATCTCGAAGGAAATATGATTATGGGAATCATGGATCTGATTTTTCATATTCATCTGCCCAACGTAGCCAAGATGAAGAAACATTTTACGGACTAGGTAATCTCTTTAGGCTCTTTTGCTATTCACTTTTATCATTTCTGTAATGATCGTTTTTATGTATGGTAGAGCATATTGTTGTCTGAACTCTGGAGTTTTCCGATTAAATTCTTCTCTACTTGCTAGACCATATTTATTGTCTGTAAATAAGTGACTAAAGAATGAAAAAAGTTCCTAAAATGGTGTCTATAAGGTGAGAGCTTTAGAGCTGGCACGGTGTTTTAAATAGTCCTTCCAGGCGCTACGGTGCAGGTCAGTGCCTCACATTGAAAGGCCAGACACACAGAAGAAGGCTCACACCTTTGTAAAACCCTTAGCCATGGGCTTTTTTCAATTATTAAATTAAAGGGGGTGTTCTTTGTTATTAATTAAAAAGTTAAAATTTACTAACATTAAATGTATTTTTTAAAAAACAATTCATGTTCCGACTTCATTTTAAAGTATGCTTTTAAAATATTATGAGAAAAAAAAAGACCACTCACTTCAAGTTTGCTTTCTCTTCTTTGGAAGGCTATTGTACTGATTGTGACTAAGCTTGTAGTTTCAGACTGTCTCTAAAATACTAACCAGCCGATCATTTTAATTCTTGGGCGCTGAGTATAGGTGGAACGCTTGTTTCTTGTGTAACTAGAAAAGATCTTGAATTGGGGCGTATTTGTGCACCAAATTTTATCTTGAAGTATTTGTGCATAAAATTTTGCTTGCTGGGTGAAATTTTTTAATTTCTTCGTTAATGTGAAATTCAACTTAACAAAATGCTATTCATCTATTCTGCTCATTACTAATTTGGATGATACTTTTTAGTTTCTACACTCTTTCACAAGATTTTAGAATTCTCAGTTACCTTTATCAAAGCTTCCTTTTCTACGGAATACACTATGGAAAGCTCTTCCTTGAGCATGTTAATCTATTGAATGGATTTAGTCCCATTTTTCTGTTGTTGATCTCTCTTTTAGTCTTGTTCATTTCTTCTATTTAAGACCGCTTCCGTTATGCTGCAGGTAATTTTTTCAAGGATGTTCAAATAGCAGTAGGTAGATTTGTTCTCTCTGACATGATTAATGCAGACGCTAGTTATCAATCTGCTTGATTTAAGAACTGGCTAAACATCTTTTATTTTCTCCTTTGTATTGCTTGTAAAATAAGTTGGAATTTGTAGCTAAAAGCTGTTTTTTTTTTTTTCTTAACAGGGGACTTCTTTAAGGATCTTCAAGAGGAATTTCGAAATTGGGAGGCCAGTGTTTCTTCACAAGGGACGCCGAAGAGCCTTTGGGAAGAACTGGGGGTGAGACATTGATTTAGTTAGAAATTTAAATAACATATCAAAAGAATGGGTTTAATCATTTAGATACTCGGTTCCTGTACTCTTGGCTGTGGTTCACTTTGTTTGTCGCACTTTCAAAATGTCTACTTTGGTTTATATTGATAATTTTACTTTGGAATGTTCATTTTAGTCTATTTAATTGTAGAAAGGGATCATTCGGTCTGAATTTTGAATTGCAAAATGAAGCCTTTGCATGAGTTGTTTAAATGTGTATTTACGTATTTCAGGAAATTGGAGAGGAATTTGTGGAATTTCTTGAGAAAGAACTCAACATAATCGATGATTCAGAAGCTGAATCAAATAACAACAAAGCATCAGATAAGACAGATTCTTTTAGAACTTCCAATGCTGATAGCATGAGAAACGATGGTCGAAGTCAAACCAGCAAGGGAAGTAGTATCGAGGATGATATCGACGAGATAGAAGCCACACTTTTGAAGTTGAAGAGGGAATTGGGGTTGTAG ATGCTCGAATTGGCTATACCGCAAAATTTCCCTTACATTATCTCTGACGCCATTTCAAGATCTGTTTCTTATCCTTATATTTTCTTTTGTCGAAATCAACTAAAATCTTCAATATCCAATCGCCGGTTCTTCAGTTACCCGCTGTTGGCACCTCAGAGCTTTGAATCAAGTTACTTGACGTATCGTAGGAAGAGCTTTGTGACGCTTGTGAAAGCGAGTCGGAGAGAGTCACCGTACGAAGTGCTTGGTGTTTCTCCAACCGCAACTCCAAATGAAATCAAAAGGGCTTATCGGAAACTGGCTCTGAAGTATCATCCCGATGTTAATAAAGAGCCTAATGCACAGGAGAAATTTATGCGTATTAAACATGCATACAACACATTGCTGAATTCTGAATCTCGAAGGAAATATGATTATGGGAATCATGGATCTGATTTTTCATATTCATCTGCCCAACGTAGCCAAGATGAAGAAACATTTTACGGACTAGGGGACTTCTTTAAGGATCTTCAAGAGGAATTTCGAAATTGGGAGGCCAGTGTTTCTTCACAAGGGACGCCGAAGAGCCTTTGGGAAGAACTGGGGGAAATTGGAGAGGAATTTGTGGAATTTCTTGAGAAAGAACTCAACATAATCGATGATTCAGAAGCTGAATCAAATAACAACAAAGCATCAGATAAGACAGATTCTTTTAGAACTTCCAATGCTGATAGCATGAGAAACGATGGTCGAAGTCAAACCAGCAAGGGAAGTAGTATCGAGGATGATATCGACGAGATAGAAGCCACACTTTTGAAGTTGAAGAGGGAATTGGGGTTGTAG ATGCTCGAATTGGCTATACCGCAAAATTTCCCTTACATTATCTCTGACGCCATTTCAAGATCTGTTTCTTATCCTTATATTTTCTTTTGTCGAAATCAACTAAAATCTTCAATATCCAATCGCCGGTTCTTCAGTTACCCGCTGTTGGCACCTCAGAGCTTTGAATCAAGTTACTTGACGTATCGTAGGAAGAGCTTTGTGACGCTTGTGAAAGCGAGTCGGAGAGAGTCACCGTACGAAGTGCTTGGTGTTTCTCCAACCGCAACTCCAAATGAAATCAAAAGGGCTTATCGGAAACTGGCTCTGAAGTATCATCCCGATGTTAATAAAGAGCCTAATGCACAGGAGAAATTTATGCGTATTAAACATGCATACAACACATTGCTGAATTCTGAATCTCGAAGGAAATATGATTATGGGAATCATGGATCTGATTTTTCATATTCATCTGCCCAACGTAGCCAAGATGAAGAAACATTTTACGGACTAGGGGACTTCTTTAAGGATCTTCAAGAGGAATTTCGAAATTGGGAGGCCAGTGTTTCTTCACAAGGGACGCCGAAGAGCCTTTGGGAAGAACTGGGGGAAATTGGAGAGGAATTTGTGGAATTTCTTGAGAAAGAACTCAACATAATCGATGATTCAGAAGCTGAATCAAATAACAACAAAGCATCAGATAAGACAGATTCTTTTAGAACTTCCAATGCTGATAGCATGAGAAACGATGGTCGAAGTCAAACCAGCAAGGGAAGTAGTATCGAGGATGATATCGACGAGATAGAAGCCACACTTTTGAAGTTGAAGAGGGAATTGGGGTTGTAG MLELAIPQNFPYIISDAISRSVSYPYIFFCRNQLKSSISNRRFFSYPLLAPQSFESSYLTYRRKSFVTLVKASRRESPYEVLGVSPTATPNEIKRAYRKLALKYHPDVNKEPNAQEKFMRIKHAYNTLLNSESRRKYDYGNHGSDFSYSSAQRSQDEETFYGLGDFFKDLQEEFRNWEASVSSQGTPKSLWEELGEIGEEFVEFLEKELNIIDDSEAESNNNKASDKTDSFRTSNADSMRNDGRSQTSKGSSIEDDIDEIEATLLKLKRELGL*
BLAST of Csa6G190200 vs. Swiss-Prot
Match: DNAJ_METTE (Chaperone protein DnaJ OS=Methanosarcina thermophila GN=dnaJ PE=3 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 1.5e-16 Identity = 45/91 (49.45%), Postives = 60/91 (65.93%), Query Frame = 1
BLAST of Csa6G190200 vs. Swiss-Prot
Match: DNAJ_SYNJB (Chaperone protein DnaJ OS=Synechococcus sp. (strain JA-2-3B'a(2-13)) GN=dnaJ PE=3 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 3.4e-16 Identity = 47/106 (44.34%), Postives = 65/106 (61.32%), Query Frame = 1
BLAST of Csa6G190200 vs. Swiss-Prot
Match: DNAJ_GEOSW (Chaperone protein DnaJ OS=Geobacillus sp. (strain WCH70) GN=dnaJ PE=3 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 7.6e-16 Identity = 45/90 (50.00%), Postives = 52/90 (57.78%), Query Frame = 1
BLAST of Csa6G190200 vs. Swiss-Prot
Match: DNAJ_SYNJA (Chaperone protein DnaJ OS=Synechococcus sp. (strain JA-3-3Ab) GN=dnaJ PE=3 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 7.6e-16 Identity = 48/97 (49.48%), Postives = 61/97 (62.89%), Query Frame = 1
BLAST of Csa6G190200 vs. Swiss-Prot
Match: DNAJ_ACAM1 (Chaperone protein DnaJ OS=Acaryochloris marina (strain MBIC 11017) GN=dnaJ PE=3 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 1.3e-15 Identity = 44/91 (48.35%), Postives = 58/91 (63.74%), Query Frame = 1
BLAST of Csa6G190200 vs. TrEMBL
Match: A0A0A0KE71_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G190200 PE=4 SV=1) HSP 1 Score: 545.0 bits (1403), Expect = 5.1e-152 Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 1
BLAST of Csa6G190200 vs. TrEMBL
Match: A0A067LCM1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02950 PE=4 SV=1) HSP 1 Score: 299.3 bits (765), Expect = 4.8e-78 Identity = 170/283 (60.07%), Postives = 202/283 (71.38%), Query Frame = 1
BLAST of Csa6G190200 vs. TrEMBL
Match: D7SKB6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g05140 PE=4 SV=1) HSP 1 Score: 292.7 bits (748), Expect = 4.5e-76 Identity = 162/268 (60.45%), Postives = 193/268 (72.01%), Query Frame = 1
BLAST of Csa6G190200 vs. TrEMBL
Match: V4SCA8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10028974mg PE=4 SV=1) HSP 1 Score: 290.0 bits (741), Expect = 2.9e-75 Identity = 157/243 (64.61%), Postives = 186/243 (76.54%), Query Frame = 1
BLAST of Csa6G190200 vs. TrEMBL
Match: A5BDU1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006764 PE=4 SV=1) HSP 1 Score: 288.9 bits (738), Expect = 6.5e-75 Identity = 147/210 (70.00%), Postives = 172/210 (81.90%), Query Frame = 1
BLAST of Csa6G190200 vs. TAIR10
Match: AT5G59610.1 (AT5G59610.1 Chaperone DnaJ-domain superfamily protein) HSP 1 Score: 253.4 bits (646), Expect = 1.5e-67 Identity = 131/215 (60.93%), Postives = 160/215 (74.42%), Query Frame = 1
BLAST of Csa6G190200 vs. TAIR10
Match: AT1G80030.1 (AT1G80030.1 Molecular chaperone Hsp40/DnaJ family protein) HSP 1 Score: 79.0 bits (193), Expect = 5.2e-15 Identity = 59/156 (37.82%), Postives = 74/156 (47.44%), Query Frame = 1
BLAST of Csa6G190200 vs. TAIR10
Match: AT2G22360.1 (AT2G22360.1 DNAJ heat shock family protein) HSP 1 Score: 77.0 bits (188), Expect = 2.0e-14 Identity = 39/66 (59.09%), Postives = 42/66 (63.64%), Query Frame = 1
BLAST of Csa6G190200 vs. TAIR10
Match: AT5G05750.1 (AT5G05750.1 DNAJ heat shock N-terminal domain-containing protein) HSP 1 Score: 75.9 bits (185), Expect = 4.4e-14 Identity = 42/128 (32.81%), Postives = 71/128 (55.47%), Query Frame = 1
BLAST of Csa6G190200 vs. TAIR10
Match: AT3G57340.1 (AT3G57340.1 Heat shock protein DnaJ, N-terminal with domain of unknown function (DUF1977)) HSP 1 Score: 75.9 bits (185), Expect = 4.4e-14 Identity = 39/114 (34.21%), Postives = 63/114 (55.26%), Query Frame = 1
BLAST of Csa6G190200 vs. NCBI nr
Match: gi|778713852|ref|XP_011657144.1| (PREDICTED: protein CAJ1 isoform X2 [Cucumis sativus]) HSP 1 Score: 545.0 bits (1403), Expect = 7.3e-152 Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 1
BLAST of Csa6G190200 vs. NCBI nr
Match: gi|778713850|ref|XP_011657143.1| (PREDICTED: dnaJ homolog subfamily B member 9 isoform X1 [Cucumis sativus]) HSP 1 Score: 536.6 bits (1381), Expect = 2.6e-149 Identity = 273/284 (96.13%), Postives = 273/284 (96.13%), Query Frame = 1
BLAST of Csa6G190200 vs. NCBI nr
Match: gi|659128207|ref|XP_008464102.1| (PREDICTED: protein CAJ1 isoform X2 [Cucumis melo]) HSP 1 Score: 516.5 bits (1329), Expect = 2.8e-143 Identity = 260/278 (93.53%), Postives = 267/278 (96.04%), Query Frame = 1
BLAST of Csa6G190200 vs. NCBI nr
Match: gi|659128205|ref|XP_008464101.1| (PREDICTED: dnaJ homolog subfamily B member 9 isoform X1 [Cucumis melo]) HSP 1 Score: 509.6 bits (1311), Expect = 3.4e-141 Identity = 261/289 (90.31%), Postives = 268/289 (92.73%), Query Frame = 1
BLAST of Csa6G190200 vs. NCBI nr
Match: gi|1009114958|ref|XP_015873971.1| (PREDICTED: dnaJ homolog subfamily B member 9 isoform X2 [Ziziphus jujuba]) HSP 1 Score: 312.0 bits (798), Expect = 1.0e-81 Identity = 164/236 (69.49%), Postives = 186/236 (78.81%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |