Csa6G187990 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G187990
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionAcyl-coenzyme A thioesterase; contains IPR006683 (Thioesterase superfamily)
LocationChr6 : 12159229 .. 12160218 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTATCTGAGCACTCCCGATAAAACAAAAGGAAGCGATCGAAAGAGAGGAAGTAGAAAGTGAAAGCGTCTCATGGAGAAGGCGAAGCAGCTTCTGGAATTGACTAAGGAGGAAACTGATGCCGTCCACAAACTCCCCGTCCGCCCAAAGAAACCCGGACAGTCATGCTTCTATACTTTCTTCACTCTCAGGGGCATCCGAGTTGACCGTGTCGAACCAGGGCTCGTTGTTTGTACCCTCAAGGTCCCCCCTCGCCTCACTGTACGATTCCGAAAACTCTCTCTTACATCCTTCTCCGTCAATTTCCCCCAAATTCCGACCTAATTCTGATGAATATCTAGTGAAAATCGATAGACGATTTGTTCATCAGCGAGCGAGGTTAATTGTTCAAATTAATTACTCGTTTTCGATTTTTCAGGATCGATCGGGGAAACTAGCTTCGGGAGCGATCGCAAACCTAGTAGATGAAATTGGTTGTGCCGTAATCTATGATAAAGACCTACCGGAGCCGGTTTCCGTCGACATGTCGATCTCGTATATGTCGAGTGCAGACGTCGATGTACGTATAATACCATCTCTTACCTATCAGATTCTCTTCAAAATCCCTAAACTAAGCAAACAGCAGATAAGAAAAATGAAACTGAAATGATTGTGTGTGCAATTGAATACGTGCAGGATGAATTGGAAATTGTATCGAAGCTTTTAGGGCAAAAAGGGCGATATTCTGGAACCAGTGTGGTTATTAAGAACAAAAGGAATGGAGAAATTGTTGCTGAAGGAAGGCACTCTTTGTTCAGCTTACGGCCAACTACTGTAAAGTCTAAACTGTGAGTGAAGTTAATTTGATATTTTGGCTGTGAAAATTTGGATATGCTGCCATTTTAATTTTAGATCAAAACAAAATATTTTCTGATTATGCACTTGTATGGGGATTCTTGTATGTGGATGATCCAAATTACGACATTTTGGTTGTGAAATTTGGATCATTGTAC

mRNA sequence

ATGGAGAAGGCGAAGCAGCTTCTGGAATTGACTAAGGAGGAAACTGATGCCGTCCACAAACTCCCCGTCCGCCCAAAGAAACCCGGACAGTCATGCTTCTATACTTTCTTCACTCTCAGGGGCATCCGAGTTGACCGTGTCGAACCAGGGCTCGTTGTTTGTACCCTCAAGGTCCCCCCTCGCCTCACTGATCGATCGGGGAAACTAGCTTCGGGAGCGATCGCAAACCTAGTAGATGAAATTGGTTGTGCCGTAATCTATGATAAAGACCTACCGGAGCCGGTTTCCGTCGACATGTCGATCTCGTATATGTCGAGTGCAGACGTCGATGATGAATTGGAAATTGTATCGAAGCTTTTAGGGCAAAAAGGGCGATATTCTGGAACCAGTGTGGTTATTAAGAACAAAAGGAATGGAGAAATTGTTGCTGAAGGAAGGCACTCTTTGTTCAGCTTACGGCCAACTACTGTAAAGTCTAAACTGTGA

Coding sequence (CDS)

ATGGAGAAGGCGAAGCAGCTTCTGGAATTGACTAAGGAGGAAACTGATGCCGTCCACAAACTCCCCGTCCGCCCAAAGAAACCCGGACAGTCATGCTTCTATACTTTCTTCACTCTCAGGGGCATCCGAGTTGACCGTGTCGAACCAGGGCTCGTTGTTTGTACCCTCAAGGTCCCCCCTCGCCTCACTGATCGATCGGGGAAACTAGCTTCGGGAGCGATCGCAAACCTAGTAGATGAAATTGGTTGTGCCGTAATCTATGATAAAGACCTACCGGAGCCGGTTTCCGTCGACATGTCGATCTCGTATATGTCGAGTGCAGACGTCGATGATGAATTGGAAATTGTATCGAAGCTTTTAGGGCAAAAAGGGCGATATTCTGGAACCAGTGTGGTTATTAAGAACAAAAGGAATGGAGAAATTGTTGCTGAAGGAAGGCACTCTTTGTTCAGCTTACGGCCAACTACTGTAAAGTCTAAACTGTGA

Protein sequence

MEKAKQLLELTKEETDAVHKLPVRPKKPGQSCFYTFFTLRGIRVDRVEPGLVVCTLKVPPRLTDRSGKLASGAIANLVDEIGCAVIYDKDLPEPVSVDMSISYMSSADVDDELEIVSKLLGQKGRYSGTSVVIKNKRNGEIVAEGRHSLFSLRPTTVKSKL*
Homology
[Close]
BLAST of Csa6G187990 vs. Swiss-Prot
Match: ACO13_PONAB (Acyl-coenzyme A thioesterase 13 OS=Pongo abelii GN=ACOT13 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 3.3e-11
Identity = 39/101 (38.61%), Postives = 57/101 (56.44%), Query Frame = 1 

Query: 49  PGLVVCTLKVPPRLTDRSGKLASGAIANLVDEIGCAVIYDKDLPEP-VSVDMSISYMSSA 108
           PG V+C +KV    T+  G L  G  A LVD I    +   +   P VSVDM+I+YMS A
Sbjct: 35  PGKVICEMKVEEEHTNAIGTLHGGLTATLVDNISTMALLCTERGAPGVSVDMNITYMSPA 94

Query: 109 DVDDELEIVSKLLGQKGRYSGTSVVIKNKRNGEIVAEGRHS 149
            + +++ I + +L Q    + TSV + NK  G+++A+GRH+
Sbjct: 95  KLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRHT 135

[Close]
BLAST of Csa6G187990 vs. Swiss-Prot
Match: ACO13_HUMAN (Acyl-coenzyme A thioesterase 13 OS=Homo sapiens GN=ACOT13 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 3.3e-11
Identity = 39/101 (38.61%), Postives = 57/101 (56.44%), Query Frame = 1 

Query: 49  PGLVVCTLKVPPRLTDRSGKLASGAIANLVDEIGCAVIYDKDLPEP-VSVDMSISYMSSA 108
           PG V+C +KV    T+  G L  G  A LVD I    +   +   P VSVDM+I+YMS A
Sbjct: 35  PGKVICEMKVEEEHTNAIGTLHGGLTATLVDNISTMALLCTERGAPGVSVDMNITYMSPA 94

Query: 109 DVDDELEIVSKLLGQKGRYSGTSVVIKNKRNGEIVAEGRHS 149
            + +++ I + +L Q    + TSV + NK  G+++A+GRH+
Sbjct: 95  KLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRHT 135

[Close]
BLAST of Csa6G187990 vs. Swiss-Prot
Match: ACO13_MOUSE (Acyl-coenzyme A thioesterase 13 OS=Mus musculus GN=Acot13 PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.6e-10
Identity = 37/101 (36.63%), Postives = 57/101 (56.44%), Query Frame = 1 

Query: 49  PGLVVCTLKVPPRLTDRSGKLASGAIANLVDEIGCAVIYDKDLPEP-VSVDMSISYMSSA 108
           P  ++C +KV  + T++ G L  G  A LVD I    +   +   P VSVDM+I+YMS A
Sbjct: 35  PEKLICEMKVEEQHTNKLGTLHGGLTATLVDSISTMALMCTERGAPGVSVDMNITYMSPA 94

Query: 109 DVDDELEIVSKLLGQKGRYSGTSVVIKNKRNGEIVAEGRHS 149
            + +E+ I + +L Q    +  SV + NK  G+++A+GRH+
Sbjct: 95  KIGEEIVITAHILKQGKTLAFASVDLTNKTTGKLIAQGRHT 135

[Close]
BLAST of Csa6G187990 vs. TrEMBL
Match: A0A0A0KH68_CUCSA (Acyl-CoA thioesterase OS=Cucumis sativus GN=Csa_6G187990 PE=4 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 7.8e-84
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 1 

Query: 1   MEKAKQLLELTKEETDAVHKLPVRPKKPGQSCFYTFFTLRGIRVDRVEPGLVVCTLKVPP 60
           MEKAKQLLELTKEETDAVHKLPVRPKKPGQSCFYTFFTLRGIRVDRVEPGLVVCTLKVPP
Sbjct: 1   MEKAKQLLELTKEETDAVHKLPVRPKKPGQSCFYTFFTLRGIRVDRVEPGLVVCTLKVPP 60

Query: 61  RLTDRSGKLASGAIANLVDEIGCAVIYDKDLPEPVSVDMSISYMSSADVDDELEIVSKLL 120
           RLTDRSGKLASGAIANLVDEIGCAVIYDKDLPEPVSVDMSISYMSSADVDDELEIVSKLL
Sbjct: 61  RLTDRSGKLASGAIANLVDEIGCAVIYDKDLPEPVSVDMSISYMSSADVDDELEIVSKLL 120

Query: 121 GQKGRYSGTSVVIKNKRNGEIVAEGRHSLFSLRPTTVKSKL 162
           GQKGRYSGTSVVIKNKRNGEIVAEGRHSLFSLRPTTVKSKL
Sbjct: 121 GQKGRYSGTSVVIKNKRNGEIVAEGRHSLFSLRPTTVKSKL 161

[Close]
BLAST of Csa6G187990 vs. TrEMBL
Match: G4V489_CUCSA (Putative acyl-CoA thioesterase (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 1.6e-76
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 1 

Query: 2   EKAKQLLELTKEETDAVHKLPVRPKKPGQSCFYTFFTLRGIRVDRVEPGLVVCTLKVPPR 61
           EKAKQLLELTKEETDAVHKLPVRPKKPGQSCFYTFFTLRGIRVDRVEPGLVVCTLKVPPR
Sbjct: 1   EKAKQLLELTKEETDAVHKLPVRPKKPGQSCFYTFFTLRGIRVDRVEPGLVVCTLKVPPR 60

Query: 62  LTDRSGKLASGAIANLVDEIGCAVIYDKDLPEPVSVDMSISYMSSADVDDELEIVSKLLG 121
           LTDRSGKLASGAIANLVDEIGCAVIYDKDLPEPVSVDMSISYMSSADVDDELEIVSKLLG
Sbjct: 61  LTDRSGKLASGAIANLVDEIGCAVIYDKDLPEPVSVDMSISYMSSADVDDELEIVSKLLG 120

Query: 122 QKGRYSGTSVVIKNKRNGEIVAEGRHSL 150
           QKGRYSGTSVVIKNKRNGEIVAEGRHSL
Sbjct: 121 QKGRYSGTSVVIKNKRNGEIVAEGRHSL 148

[Close]
BLAST of Csa6G187990 vs. TrEMBL
Match: W9RPK8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022072 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 9.6e-50
Identity = 105/150 (70.00%), Postives = 123/150 (82.00%), Query Frame = 1 

Query: 1   MEKAKQLLELTKEETDAVHKLPVRPKKPGQSCFYTFFTLRGIRVDRVEPGLVVCTLKVPP 60
           M+KAK+ LELT+EE++ V   P  P  PG SCFY  F+ +GIRVDRVEPGLVVC  KVPP
Sbjct: 1   MDKAKKFLELTEEESETV---PSGPFVPG-SCFYLDFSFKGIRVDRVEPGLVVCIFKVPP 60

Query: 61  RLTDRSGKLASGAIANLVDEIGCAVIYDKDLPEPVSVDMSISYMSSADVDDELEIVSKLL 120
           RLTDR GKLA GAIAN+VDE+G  +I+D+ LP  VSVDMSISY+S+A VDDELEI S+LL
Sbjct: 61  RLTDRDGKLAKGAIANMVDEVGALLIHDESLPMSVSVDMSISYLSTAQVDDELEITSRLL 120

Query: 121 GQKGRYSGTSVVIKNKRNGEIVAEGRHSLF 151
           GQKG YSGT+V+IKNK  GEI+AEGRHSLF
Sbjct: 121 GQKGGYSGTAVLIKNKATGEIIAEGRHSLF 146

[Close]
BLAST of Csa6G187990 vs. TrEMBL
Match: M1CZM7_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400030434 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 1.8e-48
Identity = 101/151 (66.89%), Postives = 120/151 (79.47%), Query Frame = 1 

Query: 1   MEKAKQLLELTKEETDAVHKLPVRPKKPGQSC-FYTFFTLRGIRVDRVEPGLVVCTLKVP 60
           MEKAK  LELT+ E+D V  L   P + G  C FY +++LRGIRVDR+EPG V CT KVP
Sbjct: 1   MEKAKAFLELTQGESDRVSSLAFPPHRLGTECSFYEYYSLRGIRVDRIEPGQVFCTFKVP 60

Query: 61  PRLTDRSGKLASGAIANLVDEIGCAVIYDKDLPEPVSVDMSISYMSSADVDDELEIVSKL 120
           PRLTDR GKLASGAIANLVDE+G AV+Y + LP  VSVDMSIS++SSA   DELEI+ ++
Sbjct: 61  PRLTDREGKLASGAIANLVDEVGGAVVYVEGLPMNVSVDMSISFLSSAKAGDELEIIGRV 120

Query: 121 LGQKGRYSGTSVVIKNKRNGEIVAEGRHSLF 151
           LGQKG YSGTSV++KNK  GE++AEGRHSLF
Sbjct: 121 LGQKGGYSGTSVLVKNKTTGELIAEGRHSLF 151

[Close]
BLAST of Csa6G187990 vs. TrEMBL
Match: K4CA29_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 5.3e-48
Identity = 99/151 (65.56%), Postives = 120/151 (79.47%), Query Frame = 1 

Query: 1   MEKAKQLLELTKEETDAVHKLPVRPKKPGQSC-FYTFFTLRGIRVDRVEPGLVVCTLKVP 60
           MEKAK  LELT+ E+D V  L   P + G  C FY +++LRGIRVDR+EPG + CT KVP
Sbjct: 1   MEKAKAFLELTQGESDRVSSLAFPPHRLGTECSFYEYYSLRGIRVDRIEPGQLFCTFKVP 60

Query: 61  PRLTDRSGKLASGAIANLVDEIGCAVIYDKDLPEPVSVDMSISYMSSADVDDELEIVSKL 120
           PRLTDR GKLASGAIANLVDE+G AV+Y + LP  VSVDMSIS++SSA   DELE++ ++
Sbjct: 61  PRLTDREGKLASGAIANLVDEVGGAVVYVEGLPMNVSVDMSISFLSSAKAGDELEVIGRV 120

Query: 121 LGQKGRYSGTSVVIKNKRNGEIVAEGRHSLF 151
           LGQKG YSGTSV++KNK  GE++AEGRHSLF
Sbjct: 121 LGQKGGYSGTSVLVKNKTTGELIAEGRHSLF 151

[Close]
BLAST of Csa6G187990 vs. TAIR10
Match: AT2G29590.1 (AT2G29590.1 Thioesterase superfamily protein)

HSP 1 Score: 157.1 bits (396), Expect = 8.9e-39
Identity = 81/150 (54.00%), Postives = 104/150 (69.33%), Query Frame = 1 

Query: 1   MEKAKQLLELTKEETDAVHKLPVRPKKPGQSCFYTFFTLRGIRVDRVEPGLVVCTLKVPP 60
           MEK  + L+L+ E  D      V         FY  F+LRGIRV+RVEPG + C+ KVP 
Sbjct: 2   MEKIMEYLQLSDEVVDDGEAPRVEEFLGEGKSFYENFSLRGIRVNRVEPGFISCSFKVPL 61

Query: 61  RLTDRSGKLASGAIANLVDEIGCAVIYDKDLPEPVSVDMSISYMSSADVDDELEIVSKLL 120
           RLTDR   LA+GAIANLVDE+G A+++ + LP  VSVDMSI+++S A + +ELEI S+LL
Sbjct: 62  RLTDRDKNLANGAIANLVDEVGGALVHGEGLPMSVSVDMSIAFLSKAKLGEELEITSRLL 121

Query: 121 GQKGRYSGTSVVIKNKRNGEIVAEGRHSLF 151
           G++G Y GT VV++NK  GEI+AEGRHS+F
Sbjct: 122 GERGGYKGTIVVVRNKMTGEIIAEGRHSMF 151

[Close]
BLAST of Csa6G187990 vs. TAIR10
Match: AT1G04290.1 (AT1G04290.1 Thioesterase superfamily protein)

HSP 1 Score: 96.7 bits (239), Expect = 1.4e-20
Identity = 58/151 (38.41%), Postives = 88/151 (58.28%), Query Frame = 1 

Query: 1   MEKAKQLLELTKEETDAVHKLPVRPKKPGQSCFYTFFTLRGIRVDRVEPGLVVCTLKVPP 60
           +E  K+ LE  ++E     K P+  K P +  F   F   G++VD +EPG +VC++K+PP
Sbjct: 3   LESVKKYLEGDEDEKA---KEPMVAKLPHR--FLERFVTNGLKVDLIEPGRIVCSMKIPP 62

Query: 61  RLTDRSGKLASGAIANLVDEIGCAVIYDKDLPEP-VSVDMSISYMSSADVDDELEIVSKL 120
            L +    L  GA A LVD IG AVIY        VSV++++SY+ +A +D+E+EI SK 
Sbjct: 63  HLLNAGKFLHGGATATLVDLIGSAVIYTAGASHSGVSVEINVSYLDAAFLDEEIEIESKA 122

Query: 121 LGQKGRYSGTSVVIKNKRNGEIVAEGRHSLF 151
           L      +  SV ++ K  G+I+A+GRH+ +
Sbjct: 123 LRVGKAVAVVSVELRKKTTGKIIAQGRHTKY 148

[Close]
BLAST of Csa6G187990 vs. TAIR10
Match: AT3G16175.1 (AT3G16175.1 Thioesterase superfamily protein)

HSP 1 Score: 63.2 bits (152), Expect = 1.7e-10
Identity = 34/126 (26.98%), Postives = 63/126 (50.00%), Query Frame = 1 

Query: 34  YTFFTLRGIRVDRVEPGLVVCTLKVPPRLTDRSGKLASGAIANLVDEIGCAVIYDKDLPE 93
           +    L+G+ +  V  G++ C L V   +    G   +G I  ++D IG + +Y      
Sbjct: 25  FEILILKGLELIHVGKGILRCKLLVTDHVVGEDGSWNAGVITAVMDSIGASAVYSSGGGL 84

Query: 94  PVSVDMSISYMSSADVDDELEIVSKLLGQKGRYSGTSVVIKNKRNGEIVAEGRHSLFSLR 153
            +SVD++ S+ S+A + + +EI +++ G  G      + I+ + +GEI+A GR     + 
Sbjct: 85  HISVDLNSSFYSTAKIHETVEIEARVNGSNGGLKSAVIEIRRETSGEIIATGR---LWMA 144

Query: 154 PTTVKS 160
           P +VK+
Sbjct: 145 PLSVKA 147

[Close]
BLAST of Csa6G187990 vs. NCBI nr
Match: gi|449450786|ref|XP_004143143.1| (PREDICTED: uncharacterized protein LOC101209449 [Cucumis sativus])

HSP 1 Score: 317.8 bits (813), Expect = 1.1e-83
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 1 

Query: 1   MEKAKQLLELTKEETDAVHKLPVRPKKPGQSCFYTFFTLRGIRVDRVEPGLVVCTLKVPP 60
           MEKAKQLLELTKEETDAVHKLPVRPKKPGQSCFYTFFTLRGIRVDRVEPGLVVCTLKVPP
Sbjct: 1   MEKAKQLLELTKEETDAVHKLPVRPKKPGQSCFYTFFTLRGIRVDRVEPGLVVCTLKVPP 60

Query: 61  RLTDRSGKLASGAIANLVDEIGCAVIYDKDLPEPVSVDMSISYMSSADVDDELEIVSKLL 120
           RLTDRSGKLASGAIANLVDEIGCAVIYDKDLPEPVSVDMSISYMSSADVDDELEIVSKLL
Sbjct: 61  RLTDRSGKLASGAIANLVDEIGCAVIYDKDLPEPVSVDMSISYMSSADVDDELEIVSKLL 120

Query: 121 GQKGRYSGTSVVIKNKRNGEIVAEGRHSLFSLRPTTVKSKL 162
           GQKGRYSGTSVVIKNKRNGEIVAEGRHSLFSLRPTTVKSKL
Sbjct: 121 GQKGRYSGTSVVIKNKRNGEIVAEGRHSLFSLRPTTVKSKL 161

[Close]
BLAST of Csa6G187990 vs. NCBI nr
Match: gi|659128130|ref|XP_008464061.1| (PREDICTED: acyl-coenzyme A thioesterase 13 [Cucumis melo])

HSP 1 Score: 302.4 bits (773), Expect = 4.9e-79
Identity = 153/161 (95.03%), Postives = 157/161 (97.52%), Query Frame = 1 

Query: 1   MEKAKQLLELTKEETDAVHKLPVRPKKPGQSCFYTFFTLRGIRVDRVEPGLVVCTLKVPP 60
           MEKAKQLLELTKEETDAV KLPVRPKKPGQSCFYTFF LRGI+VDRVEPGLVVCTLKVPP
Sbjct: 35  MEKAKQLLELTKEETDAVQKLPVRPKKPGQSCFYTFFALRGIQVDRVEPGLVVCTLKVPP 94

Query: 61  RLTDRSGKLASGAIANLVDEIGCAVIYDKDLPEPVSVDMSISYMSSADVDDELEIVSKLL 120
           RLTDRSGKLASGAIANLVDEIGCAVIYD+ LPEPVSVDMSISYMSSADVDDELEIVSKLL
Sbjct: 95  RLTDRSGKLASGAIANLVDEIGCAVIYDEALPEPVSVDMSISYMSSADVDDELEIVSKLL 154

Query: 121 GQKGRYSGTSVVIKNKRNGEIVAEGRHSLFSLRPTTVKSKL 162
           GQKGRYSGT VVIKNKRNGEIVAEGRHSLFS+RP+TVKSKL
Sbjct: 155 GQKGRYSGTRVVIKNKRNGEIVAEGRHSLFSIRPSTVKSKL 195

[Close]
BLAST of Csa6G187990 vs. NCBI nr
Match: gi|347817469|gb|AEP25854.1| (putative acyl-CoA thioesterase [Cucumis sativus])

HSP 1 Score: 293.5 bits (750), Expect = 2.3e-76
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 1 

Query: 2   EKAKQLLELTKEETDAVHKLPVRPKKPGQSCFYTFFTLRGIRVDRVEPGLVVCTLKVPPR 61
           EKAKQLLELTKEETDAVHKLPVRPKKPGQSCFYTFFTLRGIRVDRVEPGLVVCTLKVPPR
Sbjct: 1   EKAKQLLELTKEETDAVHKLPVRPKKPGQSCFYTFFTLRGIRVDRVEPGLVVCTLKVPPR 60

Query: 62  LTDRSGKLASGAIANLVDEIGCAVIYDKDLPEPVSVDMSISYMSSADVDDELEIVSKLLG 121
           LTDRSGKLASGAIANLVDEIGCAVIYDKDLPEPVSVDMSISYMSSADVDDELEIVSKLLG
Sbjct: 61  LTDRSGKLASGAIANLVDEIGCAVIYDKDLPEPVSVDMSISYMSSADVDDELEIVSKLLG 120

Query: 122 QKGRYSGTSVVIKNKRNGEIVAEGRHSL 150
           QKGRYSGTSVVIKNKRNGEIVAEGRHSL
Sbjct: 121 QKGRYSGTSVVIKNKRNGEIVAEGRHSL 148

[Close]
BLAST of Csa6G187990 vs. NCBI nr
Match: gi|703130697|ref|XP_010104689.1| (hypothetical protein L484_022072 [Morus notabilis])

HSP 1 Score: 204.5 bits (519), Expect = 1.4e-49
Identity = 105/150 (70.00%), Postives = 123/150 (82.00%), Query Frame = 1 

Query: 1   MEKAKQLLELTKEETDAVHKLPVRPKKPGQSCFYTFFTLRGIRVDRVEPGLVVCTLKVPP 60
           M+KAK+ LELT+EE++ V   P  P  PG SCFY  F+ +GIRVDRVEPGLVVC  KVPP
Sbjct: 1   MDKAKKFLELTEEESETV---PSGPFVPG-SCFYLDFSFKGIRVDRVEPGLVVCIFKVPP 60

Query: 61  RLTDRSGKLASGAIANLVDEIGCAVIYDKDLPEPVSVDMSISYMSSADVDDELEIVSKLL 120
           RLTDR GKLA GAIAN+VDE+G  +I+D+ LP  VSVDMSISY+S+A VDDELEI S+LL
Sbjct: 61  RLTDRDGKLAKGAIANMVDEVGALLIHDESLPMSVSVDMSISYLSTAQVDDELEITSRLL 120

Query: 121 GQKGRYSGTSVVIKNKRNGEIVAEGRHSLF 151
           GQKG YSGT+V+IKNK  GEI+AEGRHSLF
Sbjct: 121 GQKGGYSGTAVLIKNKATGEIIAEGRHSLF 146

[Close]
BLAST of Csa6G187990 vs. NCBI nr
Match: gi|565368367|ref|XP_006350818.1| (PREDICTED: acyl-coenzyme A thioesterase 13-like [Solanum tuberosum])

HSP 1 Score: 200.3 bits (508), Expect = 2.6e-48
Identity = 101/151 (66.89%), Postives = 120/151 (79.47%), Query Frame = 1 

Query: 1   MEKAKQLLELTKEETDAVHKLPVRPKKPGQSC-FYTFFTLRGIRVDRVEPGLVVCTLKVP 60
           MEKAK  LELT+ E+D V  L   P + G  C FY +++LRGIRVDR+EPG V CT KVP
Sbjct: 1   MEKAKAFLELTQGESDRVSSLAFPPHRLGTECSFYEYYSLRGIRVDRIEPGQVFCTFKVP 60

Query: 61  PRLTDRSGKLASGAIANLVDEIGCAVIYDKDLPEPVSVDMSISYMSSADVDDELEIVSKL 120
           PRLTDR GKLASGAIANLVDE+G AV+Y + LP  VSVDMSIS++SSA   DELEI+ ++
Sbjct: 61  PRLTDREGKLASGAIANLVDEVGGAVVYVEGLPMNVSVDMSISFLSSAKAGDELEIIGRV 120

Query: 121 LGQKGRYSGTSVVIKNKRNGEIVAEGRHSLF 151
           LGQKG YSGTSV++KNK  GE++AEGRHSLF
Sbjct: 121 LGQKGGYSGTSVLVKNKTTGELIAEGRHSLF 151

The following BLAST results are available for this feature:
BLAST of Csa6G187990 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ACO13_PONAB3.3e-1138.61Acyl-coenzyme A thioesterase 13 OS=Pongo abelii GN=ACOT13 PE=2 SV=1[more]
ACO13_HUMAN3.3e-1138.61Acyl-coenzyme A thioesterase 13 OS=Homo sapiens GN=ACOT13 PE=1 SV=1[more]
ACO13_MOUSE1.6e-1036.63Acyl-coenzyme A thioesterase 13 OS=Mus musculus GN=Acot13 PE=1 SV=1[more]
BLAST of Csa6G187990 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KH68_CUCSA7.8e-84100.00Acyl-CoA thioesterase OS=Cucumis sativus GN=Csa_6G187990 PE=4 SV=1[more]
G4V489_CUCSA1.6e-76100.00Putative acyl-CoA thioesterase (Fragment) OS=Cucumis sativus PE=2 SV=1[more]
W9RPK8_9ROSA9.6e-5070.00Uncharacterized protein OS=Morus notabilis GN=L484_022072 PE=4 SV=1[more]
M1CZM7_SOLTU1.8e-4866.89Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400030434 PE=4 SV=1[more]
K4CA29_SOLLC5.3e-4865.56Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
BLAST of Csa6G187990 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G29590.18.9e-3954.00 Thioesterase superfamily protein[more]
AT1G04290.11.4e-2038.41 Thioesterase superfamily protein[more]
AT3G16175.11.7e-1026.98 Thioesterase superfamily protein[more]
BLAST of Csa6G187990 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449450786|ref|XP_004143143.1|1.1e-83100.00PREDICTED: uncharacterized protein LOC101209449 [Cucumis sativus][more]
gi|659128130|ref|XP_008464061.1|4.9e-7995.03PREDICTED: acyl-coenzyme A thioesterase 13 [Cucumis melo][more]
gi|347817469|gb|AEP25854.1|2.3e-76100.00putative acyl-CoA thioesterase [Cucumis sativus][more]
gi|703130697|ref|XP_010104689.1|1.4e-4970.00hypothetical protein L484_022072 [Morus notabilis][more]
gi|565368367|ref|XP_006350818.1|2.6e-4866.89PREDICTED: acyl-coenzyme A thioesterase 13-like [Solanum tuberosum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006683Thioestr_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006468 protein phosphorylation
biological_process GO:0009697 salicylic acid biosynthetic process
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0009627 systemic acquired resistance
cellular_component GO:0005575 cellular_component
cellular_component GO:0005777 peroxisome
molecular_function GO:0003674 molecular_function
molecular_function GO:0005524 ATP binding
molecular_function GO:0005516 calmodulin binding
molecular_function GO:0004683 calmodulin-dependent protein kinase activity
molecular_function GO:0047617 acyl-CoA hydrolase activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU094528cucumber EST collection version 3.0transcribed_cluster
CU110998cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G187990.1Csa6G187990.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU110998CU110998transcribed_cluster
CU094528CU094528transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006683Thioesterase domainPFAMPF030614HBTcoord: 71..138
score: 2.
NoneNo IPR availablePANTHERPTHR21660THIOESTERASE SUPERFAMILY MEMBER-RELATEDcoord: 33..150
score: 5.7
NoneNo IPR availablePANTHERPTHR21660:SF8SUBFAMILY NOT NAMEDcoord: 33..150
score: 5.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa6G187990Cla013342Watermelon (97103) v1cuwmB512
Csa6G187990MELO3C025874Melon (DHL92) v3.5.1cumeB423
Csa6G187990ClCG02G019730Watermelon (Charleston Gray)cuwcgB437
Csa6G187990Lsi10G014140Bottle gourd (USVL1VR-Ls)culsiB413
Csa6G187990MELO3C025874.2Melon (DHL92) v3.6.1cumedB423
Csa6G187990Cla97C02G045750Watermelon (97103) v2cuwmbB427
Csa6G187990Bhi10G000610Wax gourdcuwgoB605
Csa6G187990CSPI06G14030Wild cucumber (PI 183967)cpicuB314
Csa6G187990Cucsa.139060Cucumber (Gy14) v1cgycuB202
Csa6G187990CmaCh02G007670Cucurbita maxima (Rimu)cmacuB617
Csa6G187990CmaCh20G003670Cucurbita maxima (Rimu)cmacuB553
Csa6G187990CmoCh20G003980Cucurbita moschata (Rifu)cmocuB543
Csa6G187990CmoCh02G007680Cucurbita moschata (Rifu)cmocuB609
Csa6G187990Cp4.1LG05g09610Cucurbita pepo (Zucchini)cpecuB752
Csa6G187990Cp4.1LG16g06540Cucurbita pepo (Zucchini)cpecuB290
Csa6G187990CsGy6G013920Cucumber (Gy14) v2cgybcuB282
Csa6G187990Carg03348Silver-seed gourdcarcuB0370
Csa6G187990Carg23837Silver-seed gourdcarcuB0544
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa6G187990Silver-seed gourdcarcuB0182
Csa6G187990Silver-seed gourdcarcuB0413
Csa6G187990Silver-seed gourdcarcuB1015
Csa6G187990Watermelon (97103) v2cuwmbB484
Csa6G187990Wax gourdcuwgoB641
Csa6G187990Cucumber (Chinese Long) v2cucuB165
Csa6G187990Cucurbita maxima (Rimu)cmacuB842
Csa6G187990Cucurbita moschata (Rifu)cmocuB214
Csa6G187990Cucurbita moschata (Rifu)cmocuB831
Csa6G187990Watermelon (Charleston Gray)cuwcgB494
Csa6G187990Watermelon (97103) v1cuwmB490
Csa6G187990Cucurbita pepo (Zucchini)cpecuB627
Csa6G187990Cucurbita pepo (Zucchini)cpecuB879
Csa6G187990Cucumber (Gy14) v2cgybcuB044