Csa6G176430 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGATCGAAGGCAATCCACCTTTTCCAACAATGCCAGAAAATGAAGTACCCAAAGCTTATATAGCCAACGAGCGCCCACTATTTATGGCTCCACCAAATCGTTATGCATTTGGAATACAAGAGTAAAGTCCTCTTTTTTTTCTTCTTTTTTTTTTTTTTTCATTTTGATGCTATATGCTTGACTACTAGATGTCAGTAGAAATATTTTCTTTTGTTTGCAAGTCACTTCCTCGTTAGAATATTTTTATGGTCGGGGCTTTTGGCGTAGCAGGCTAAACTTCTTTTAATAATTGTCAAGCCAGTTAATCTTAATATCTGCACTTCCTTGTCTACAGGCTAATTCAGGAATGTTGGGATGAGAAGCCGCAAAAAAGACCCACATTTCGGCAAATAATAAGAAGGTTAGAGGATATTAACACTCGACTCATGCAAACAAGAAGCTTGAAGGTAAACAAGGGCTCTCTCTCTCAATCAACGTTATTAACAGCCATTTTGCTTCTCATCGTAGCCAAAATTTGAAAAGTAACCACTGTGAATGTCATTTAAATTGTTTACAGGTGAATCCATTTTGCAGTTGTTTTCAGAATCTGAAAGCCTTATTTACAAGCGAAAGAACTAATCCAGGCAGCAGATCTTCTTACTCGGAAAGCAAATGAGTTAGTATTCTTAGAGATTCTCAGCCTTTTTCTCCCCTCTCATCCACACACGTTATGTTGTATTTAACTAAAACATAATGTTTGAGGTATTTTTGTGCATATCTTTCGCTTATTTTGCCTTTGATATTTTTCTCAAACAATTTTGGCTTGTCCTATTTTTCTTGGTTGGATGAGAGAGTTGTAAGCTAAGCTATGCCTTGACTGGTATCGTTCCCATTTGTTTCAATTGGACCATTCTTGTAGGTTGAATATTGCCATTACTTTTTTCAGTTGAACCTCTTTTTCTTTTTTCCACAGCATCCACAAAGGAGACATATCCTAAAGCTTTGATCATGAAAGCATTGTGCAAGAGATTGGCATGGTTTAGTTAAGTATTAGCAATGATGTAAAACCAAAACCAGGTAGTCTGTTCTTGAAACAGTTCAAGTGCTTGGATTCCTATCTTGATAAAGTTGTTAAAACAAGCATCATTAATTTTATAGATCTACTTCCAGTTCCCCTTGTGGTTTTATTTGGGGCACATTACATGTGAATTATTTGCTAAATTTCGTGAACTAAACCAGG ATGATCGAAGGCAATCCACCTTTTCCAACAATGCCAGAAAATGAAGTACCCAAAGCTTATATAGCCAACGAGCGCCCACTATTTATGGCTCCACCAAATCGTTATGCATTTGGAATACAAGAGCTAATTCAGGAATGTTGGGATGAGAAGCCGCAAAAAAGACCCACATTTCGGCAAATAATAAGAAGGTTAGAGGATATTAACACTCGACTCATGCAAACAAGAAGCTTGAAGGTGAATCCATTTTGCAGTTGTTTTCAGAATCTGAAAGCCTTATTTACAAGCGAAAGAACTAATCCAGGCAGCAGATCTTCTTACTCGGAAAGCAAATGA ATGATCGAAGGCAATCCACCTTTTCCAACAATGCCAGAAAATGAAGTACCCAAAGCTTATATAGCCAACGAGCGCCCACTATTTATGGCTCCACCAAATCGTTATGCATTTGGAATACAAGAGCTAATTCAGGAATGTTGGGATGAGAAGCCGCAAAAAAGACCCACATTTCGGCAAATAATAAGAAGGTTAGAGGATATTAACACTCGACTCATGCAAACAAGAAGCTTGAAGGTGAATCCATTTTGCAGTTGTTTTCAGAATCTGAAAGCCTTATTTACAAGCGAAAGAACTAATCCAGGCAGCAGATCTTCTTACTCGGAAAGCAAATGA MIEGNPPFPTMPENEVPKAYIANERPLFMAPPNRYAFGIQELIQECWDEKPQKRPTFRQIIRRLEDINTRLMQTRSLKVNPFCSCFQNLKALFTSERTNPGSRSSYSESK*
BLAST of Csa6G176430 vs. TrEMBL
Match: A0A0A0KBJ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G176430 PE=4 SV=1) HSP 1 Score: 231.5 bits (589), Expect = 5.0e-58 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 1
BLAST of Csa6G176430 vs. TrEMBL
Match: A0A0R0G8Z7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_14G026700 PE=4 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 3.4e-30 Identity = 69/110 (62.73%), Postives = 80/110 (72.73%), Query Frame = 1
BLAST of Csa6G176430 vs. TrEMBL
Match: A0A0L9UV93_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan07g019100 PE=4 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 4.4e-30 Identity = 68/110 (61.82%), Postives = 81/110 (73.64%), Query Frame = 1
BLAST of Csa6G176430 vs. TrEMBL
Match: A0A0S3RJD2_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.03G034600 PE=4 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 4.4e-30 Identity = 68/110 (61.82%), Postives = 81/110 (73.64%), Query Frame = 1
BLAST of Csa6G176430 vs. TrEMBL
Match: I1JJ60_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G288300 PE=4 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 1.3e-29 Identity = 68/110 (61.82%), Postives = 79/110 (71.82%), Query Frame = 1
BLAST of Csa6G176430 vs. TAIR10
Match: AT3G58760.1 (AT3G58760.1 Integrin-linked protein kinase family) HSP 1 Score: 97.1 bits (240), Expect = 7.5e-21 Identity = 52/109 (47.71%), Postives = 63/109 (57.80%), Query Frame = 1
BLAST of Csa6G176430 vs. TAIR10
Match: AT4G18950.1 (AT4G18950.1 Integrin-linked protein kinase family) HSP 1 Score: 90.9 bits (224), Expect = 5.4e-19 Identity = 43/90 (47.78%), Postives = 54/90 (60.00%), Query Frame = 1
BLAST of Csa6G176430 vs. TAIR10
Match: AT2G31800.1 (AT2G31800.1 Integrin-linked protein kinase family) HSP 1 Score: 52.4 bits (124), Expect = 2.1e-07 Identity = 30/68 (44.12%), Postives = 35/68 (51.47%), Query Frame = 1
BLAST of Csa6G176430 vs. TAIR10
Match: AT2G43850.1 (AT2G43850.1 Integrin-linked protein kinase family) HSP 1 Score: 47.8 bits (112), Expect = 5.2e-06 Identity = 26/66 (39.39%), Postives = 34/66 (51.52%), Query Frame = 1
BLAST of Csa6G176430 vs. TAIR10
Match: AT1G14000.1 (AT1G14000.1 VH1-interacting kinase) HSP 1 Score: 47.0 bits (110), Expect = 8.9e-06 Identity = 26/71 (36.62%), Postives = 33/71 (46.48%), Query Frame = 1
BLAST of Csa6G176430 vs. NCBI nr
Match: gi|449450866|ref|XP_004143183.1| (PREDICTED: serine/threonine-protein kinase TNNI3K [Cucumis sativus]) HSP 1 Score: 231.5 bits (589), Expect = 7.2e-58 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 1
BLAST of Csa6G176430 vs. NCBI nr
Match: gi|700191826|gb|KGN47030.1| (hypothetical protein Csa_6G176430 [Cucumis sativus]) HSP 1 Score: 231.5 bits (589), Expect = 7.2e-58 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 1
BLAST of Csa6G176430 vs. NCBI nr
Match: gi|659112914|ref|XP_008456367.1| (PREDICTED: serine/threonine-protein kinase TNNI3K [Cucumis melo]) HSP 1 Score: 223.0 bits (567), Expect = 2.6e-55 Identity = 106/110 (96.36%), Postives = 107/110 (97.27%), Query Frame = 1
BLAST of Csa6G176430 vs. NCBI nr
Match: gi|356553484|ref|XP_003545086.1| (PREDICTED: serine/threonine-protein kinase HT1 isoform X1 [Glycine max]) HSP 1 Score: 139.0 bits (349), Expect = 4.9e-30 Identity = 69/110 (62.73%), Postives = 80/110 (72.73%), Query Frame = 1
BLAST of Csa6G176430 vs. NCBI nr
Match: gi|920703262|gb|KOM46487.1| (hypothetical protein LR48_Vigan07g019100 [Vigna angularis]) HSP 1 Score: 138.7 bits (348), Expect = 6.4e-30 Identity = 68/110 (61.82%), Postives = 81/110 (73.64%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |