Csa6G169350 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G169350
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 11478485 .. 11478827 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGTTCCAGAAACTGGTCACCAGAAGTTATTTGGTGGCGGTCATCGAAAAAAGTCATTAGAAGGTTGCTGGCAATGGTCGTCGGAAATTGATGGCCAAAAAAATGGTGACTTGAGGCTGTTGGCTACAGTCGGTGGAAAACGATTGTTGGAAGTTGGCCGATGGTGATCACTTTGAAATGATTAGCGACAATTACACAGTAATGGTGGTTAGGAAAATGATCAATCGAAGTTGGCTATTGACGATTGCTGAGAAATGGTCATTGGAGGGGGGGATCGGAGGTGATCGAAGAAGGTTGCAGGGAAATTGTGGTAGGAGGTTTGTCAACGATGGTCACTAA

mRNA sequence

ATGGCTGTTCCAGAAACTGGTCACCAGAAGTTATTTGGTGGCGGTCATCGAAAAAAGTCATTAGAAGGTTGCTGGCAATGGTCGTCGGAAATTGATGGCCAAAAAAATGGTGACTTGAGGCTGTTGGCTACAGTCGGTGGAAAACGATTGTTGGAAGTTGGCCGATGCGACAATTACACAGTAATGGTGGTTAGGAAAATGATCAATCGAAGTTGGCTATTGACGATTGCTGAGAAATGGTCATTGGAGGGGGGGATCGGAGGTGATCGAAGAAGGTTGCAGGGAAATTGTGGTAGGAGGTTTGTCAACGATGGTCACTAA

Coding sequence (CDS)

ATGGCTGTTCCAGAAACTGGTCACCAGAAGTTATTTGGTGGCGGTCATCGAAAAAAGTCATTAGAAGGTTGCTGGCAATGGTCGTCGGAAATTGATGGCCAAAAAAATGGTGACTTGAGGCTGTTGGCTACAGTCGGTGGAAAACGATTGTTGGAAGTTGGCCGATGCGACAATTACACAGTAATGGTGGTTAGGAAAATGATCAATCGAAGTTGGCTATTGACGATTGCTGAGAAATGGTCATTGGAGGGGGGGATCGGAGGTGATCGAAGAAGGTTGCAGGGAAATTGTGGTAGGAGGTTTGTCAACGATGGTCACTAA

Protein sequence

MAVPETGHQKLFGGGHRKKSLEGCWQWSSEIDGQKNGDLRLLATVGGKRLLEVGRCDNYTVMVVRKMINRSWLLTIAEKWSLEGGIGGDRRRLQGNCGRRFVNDGH*
Homology
[Close]
BLAST of Csa6G169350 vs. TrEMBL
Match: A0A0A0KDZ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G169350 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 9.1e-57
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 1 

Query: 1   MAVPETGHQKLFGGGHRKKSLEGCWQWSSEIDGQKNGDLRLLATVGGKRLLEVGRCDNYT 60
           MAVPETGHQKLFGGGHRKKSLEGCWQWSSEIDGQKNGDLRLLATVGGKRLLEVGRCDNYT
Sbjct: 1   MAVPETGHQKLFGGGHRKKSLEGCWQWSSEIDGQKNGDLRLLATVGGKRLLEVGRCDNYT 60

Query: 61  VMVVRKMINRSWLLTIAEKWSLEGGIGGDRRRLQGNCGRRFVNDGH 107
           VMVVRKMINRSWLLTIAEKWSLEGGIGGDRRRLQGNCGRRFVNDGH
Sbjct: 61  VMVVRKMINRSWLLTIAEKWSLEGGIGGDRRRLQGNCGRRFVNDGH 106

[Close]
BLAST of Csa6G169350 vs. NCBI nr
Match: gi|700191815|gb|KGN47019.1| (hypothetical protein Csa_6G169350 [Cucumis sativus])

HSP 1 Score: 227.3 bits (578), Expect = 1.3e-56
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 1 

Query: 1   MAVPETGHQKLFGGGHRKKSLEGCWQWSSEIDGQKNGDLRLLATVGGKRLLEVGRCDNYT 60
           MAVPETGHQKLFGGGHRKKSLEGCWQWSSEIDGQKNGDLRLLATVGGKRLLEVGRCDNYT
Sbjct: 1   MAVPETGHQKLFGGGHRKKSLEGCWQWSSEIDGQKNGDLRLLATVGGKRLLEVGRCDNYT 60

Query: 61  VMVVRKMINRSWLLTIAEKWSLEGGIGGDRRRLQGNCGRRFVNDGH 107
           VMVVRKMINRSWLLTIAEKWSLEGGIGGDRRRLQGNCGRRFVNDGH
Sbjct: 61  VMVVRKMINRSWLLTIAEKWSLEGGIGGDRRRLQGNCGRRFVNDGH 106

The following BLAST results are available for this feature:
BLAST of Csa6G169350 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KDZ0_CUCSA9.1e-57100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G169350 PE=4 SV=1[more]
BLAST of Csa6G169350 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700191815|gb|KGN47019.1|1.3e-56100.00hypothetical protein Csa_6G169350 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G169350.1Csa6G169350.1mRNA