Csa6G167220 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G167220
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 11332045 .. 11332714 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGTGGTGCAACTCTACTTCTCCAATATGGTGCTCTCCAAGATGGTGGTGGTGCAGCTCTGCCCCTCTAAGATGATGGTGGTGCAGCTCCGCCTCTCCAAAATGATGGTGGTGCAGCTTTGTCTCTTTAAGATAATGGTAGTGAAACTTACGTCTCCAAAATGATGGTGGTGCAGCTTCGCCACTCCAAGATGATGGTGATGAAACTCACCTCTCCAAGATGGTGGTGGTGCAACTTTGCCTCTTCAATATGGGGGTCTTCAAGATAGTGGTGGTGCAACTCCACCTCTCTGAGATAACTCCCCTCTCCAAGATGTTGGTGGTGCAACCTTGCCTTTCCAAGATGATGACGATGGTGCATTGTCTTCGCCTCTCCAAAATGATGGTGGTGTAAATTCACCTTTCCAAGATGGTGGTGGTTTTGCCTCTCCAAAAGGATGATGGGATAGTCCACCTCTCCAAGATGTTAATAGTGCAGCTCCGCCTCTTCAAAATGATTCTAATGTAGCTTCCATTTCTCTAGGATGGTATTCTCCAAGATAGTGGTGGTGCAGCTTCGCCTCTCCAAAATGATAATGATGGTGTAGCTCCACCTCCACCTCTGCAAGCTGATAATGATGGTGCAACTCCGCCTCTCCAAAATGAAGATGTAGTTCAGCATCTTTAG

mRNA sequence

ATGGTGGTGGTGCAACTCTACTTCTCCAATATGGTGCTCTCCAAGATGGTGGTGGTGCAGCTCTGCCCCTCTAAGATGATGGTGGTGCAGCTCCGCCTCTCCAAAATGATGGTGGTGCAGCTTTCTTCGCCACTCCAAGATGATGGTGATGAAACTCACCTCTCCAAGATGGTGGTGGTGCAACTTTGCCTCTTCAATATGGGGGTCTTCAAGATAGTGGTGGTGCAACTCCACCTCTCTGAGATAACTCCCCTCTCCAAGATGTTGGTGGTGCAACCTTGCCTTTCCAAGATGATGACGATGGTGCATTGTCTTCGCCTCTCCAAAATGATGGATGGTATTCTCCAAGATAGTGGTGGTGCAGCTTCGCCTCTCCAAAATGATAATGATGGTGTAGCTCCACCTCCACCTCTGCAAGCTGATAATGATGGTGCAACTCCGCCTCTCCAAAATGAAGATGTAGTTCAGCATCTTTAG

Coding sequence (CDS)

ATGGTGGTGGTGCAACTCTACTTCTCCAATATGGTGCTCTCCAAGATGGTGGTGGTGCAGCTCTGCCCCTCTAAGATGATGGTGGTGCAGCTCCGCCTCTCCAAAATGATGGTGGTGCAGCTTTCTTCGCCACTCCAAGATGATGGTGATGAAACTCACCTCTCCAAGATGGTGGTGGTGCAACTTTGCCTCTTCAATATGGGGGTCTTCAAGATAGTGGTGGTGCAACTCCACCTCTCTGAGATAACTCCCCTCTCCAAGATGTTGGTGGTGCAACCTTGCCTTTCCAAGATGATGACGATGGTGCATTGTCTTCGCCTCTCCAAAATGATGGATGGTATTCTCCAAGATAGTGGTGGTGCAGCTTCGCCTCTCCAAAATGATAATGATGGTGTAGCTCCACCTCCACCTCTGCAAGCTGATAATGATGGTGCAACTCCGCCTCTCCAAAATGAAGATGTAGTTCAGCATCTTTAG

Protein sequence

MVVVQLYFSNMVLSKMVVVQLCPSKMMVVQLRLSKMMVVQLSSPLQDDGDETHLSKMVVVQLCLFNMGVFKIVVVQLHLSEITPLSKMLVVQPCLSKMMTMVHCLRLSKMMDGILQDSGGAASPLQNDNDGVAPPPPLQADNDGATPPLQNEDVVQHL*
Homology
[Close]
BLAST of Csa6G167220 vs. TrEMBL
Match: A0A0A0KDX7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G167220 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 1.9e-82
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 1 

Query: 1   MVVVQLYFSNMVLSKMVVVQLCPSKMMVVQLRLSKMMVVQLSSPLQDDGDETHLSKMVVV 60
           MVVVQLYFSNMVLSKMVVVQLCPSKMMVVQLRLSKMMVVQLSSPLQDDGDETHLSKMVVV
Sbjct: 1   MVVVQLYFSNMVLSKMVVVQLCPSKMMVVQLRLSKMMVVQLSSPLQDDGDETHLSKMVVV 60

Query: 61  QLCLFNMGVFKIVVVQLHLSEITPLSKMLVVQPCLSKMMTMVHCLRLSKMMDGILQDSGG 120
           QLCLFNMGVFKIVVVQLHLSEITPLSKMLVVQPCLSKMMTMVHCLRLSKMMDGILQDSGG
Sbjct: 61  QLCLFNMGVFKIVVVQLHLSEITPLSKMLVVQPCLSKMMTMVHCLRLSKMMDGILQDSGG 120

Query: 121 AASPLQNDNDGVAPPPPLQADNDGATPPLQNEDVVQHL 159
           AASPLQNDNDGVAPPPPLQADNDGATPPLQNEDVVQHL
Sbjct: 121 AASPLQNDNDGVAPPPPLQADNDGATPPLQNEDVVQHL 158

[Close]
BLAST of Csa6G167220 vs. NCBI nr
Match: gi|700191800|gb|KGN47004.1| (hypothetical protein Csa_6G167220 [Cucumis sativus])

HSP 1 Score: 313.2 bits (801), Expect = 2.7e-82
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 1 

Query: 1   MVVVQLYFSNMVLSKMVVVQLCPSKMMVVQLRLSKMMVVQLSSPLQDDGDETHLSKMVVV 60
           MVVVQLYFSNMVLSKMVVVQLCPSKMMVVQLRLSKMMVVQLSSPLQDDGDETHLSKMVVV
Sbjct: 1   MVVVQLYFSNMVLSKMVVVQLCPSKMMVVQLRLSKMMVVQLSSPLQDDGDETHLSKMVVV 60

Query: 61  QLCLFNMGVFKIVVVQLHLSEITPLSKMLVVQPCLSKMMTMVHCLRLSKMMDGILQDSGG 120
           QLCLFNMGVFKIVVVQLHLSEITPLSKMLVVQPCLSKMMTMVHCLRLSKMMDGILQDSGG
Sbjct: 61  QLCLFNMGVFKIVVVQLHLSEITPLSKMLVVQPCLSKMMTMVHCLRLSKMMDGILQDSGG 120

Query: 121 AASPLQNDNDGVAPPPPLQADNDGATPPLQNEDVVQHL 159
           AASPLQNDNDGVAPPPPLQADNDGATPPLQNEDVVQHL
Sbjct: 121 AASPLQNDNDGVAPPPPLQADNDGATPPLQNEDVVQHL 158

The following BLAST results are available for this feature:
BLAST of Csa6G167220 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KDX7_CUCSA1.9e-82100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G167220 PE=4 SV=1[more]
BLAST of Csa6G167220 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700191800|gb|KGN47004.1|2.7e-82100.00hypothetical protein Csa_6G167220 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G167220.1Csa6G167220.1mRNA