Csa6G161210 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G161210
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 11273475 .. 11273811 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAACGCACCATTATGCTTGATTCATGGACAACTGACTCAACGAAAACAAGGACTAATACTGCAACTTTTGAAGGAGCAAGGGATGCTTATCATCGAGCCTCTCAAATGTCAGATTCAGATCTAGGTAGGGCGTCTACTTCCCCCTCAGTAATGTGACTGGCCTGGGGCTTTTCCTCTTATTAAAAAGATCGTTATTCAACATAAGACTTGCTTATCCCCCCTCTCTCTTCTCCTGCAGGGAGCTAAGAAAGAAGAATTAATACACCCTTTATTCAATTTCTATCCCTTGATTGAATCTGTAGGGCCTGATCGCGTATCACTAAGCTTGATGTAG

mRNA sequence

ATGAAACGCACCATTATGCTTGATTCATGGACAACTGACTCAACGAAAACAAGGACTAATACTGCAACTTTTGAAGGAGCAAGGGATGCTTATCATCGAGCCTCTCAAATGTCAGATTCAGATCTAGGTAGGGCGTCTACTTCCCCCTCAGGAGCTAAGAAAGAAGAATTAATACACCCTTTATTCAATTTCTATCCCTTGATTGAATCTGTAGGGCCTGATCGCGTATCACTAAGCTTGATGTAG

Coding sequence (CDS)

ATGAAACGCACCATTATGCTTGATTCATGGACAACTGACTCAACGAAAACAAGGACTAATACTGCAACTTTTGAAGGAGCAAGGGATGCTTATCATCGAGCCTCTCAAATGTCAGATTCAGATCTAGGTAGGGCGTCTACTTCCCCCTCAGGAGCTAAGAAAGAAGAATTAATACACCCTTTATTCAATTTCTATCCCTTGATTGAATCTGTAGGGCCTGATCGCGTATCACTAAGCTTGATGTAG

Protein sequence

MKRTIMLDSWTTDSTKTRTNTATFEGARDAYHRASQMSDSDLGRASTSPSGAKKEELIHPLFNFYPLIESVGPDRVSLSLM*
Homology
[Close]
BLAST of Csa6G161210 vs. TrEMBL
Match: A0A0A0KGY5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G161210 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 5.6e-38
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 1 

Query: 1  MKRTIMLDSWTTDSTKTRTNTATFEGARDAYHRASQMSDSDLGRASTSPSGAKKEELIHP 60
          MKRTIMLDSWTTDSTKTRTNTATFEGARDAYHRASQMSDSDLGRASTSPSGAKKEELIHP
Sbjct: 1  MKRTIMLDSWTTDSTKTRTNTATFEGARDAYHRASQMSDSDLGRASTSPSGAKKEELIHP 60

Query: 61 LFNFYPLIESVGPDRVSLSLM 82
          LFNFYPLIESVGPDRVSLSLM
Sbjct: 61 LFNFYPLIESVGPDRVSLSLM 81

[Close]
BLAST of Csa6G161210 vs. NCBI nr
Match: gi|700191797|gb|KGN47001.1| (hypothetical protein Csa_6G161210 [Cucumis sativus])

HSP 1 Score: 164.5 bits (415), Expect = 8.0e-38
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 1 

Query: 1  MKRTIMLDSWTTDSTKTRTNTATFEGARDAYHRASQMSDSDLGRASTSPSGAKKEELIHP 60
          MKRTIMLDSWTTDSTKTRTNTATFEGARDAYHRASQMSDSDLGRASTSPSGAKKEELIHP
Sbjct: 1  MKRTIMLDSWTTDSTKTRTNTATFEGARDAYHRASQMSDSDLGRASTSPSGAKKEELIHP 60

Query: 61 LFNFYPLIESVGPDRVSLSLM 82
          LFNFYPLIESVGPDRVSLSLM
Sbjct: 61 LFNFYPLIESVGPDRVSLSLM 81

The following BLAST results are available for this feature:
BLAST of Csa6G161210 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KGY5_CUCSA5.6e-38100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G161210 PE=4 SV=1[more]
BLAST of Csa6G161210 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700191797|gb|KGN47001.1|8.0e-38100.00hypothetical protein Csa_6G161210 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G161210.1Csa6G161210.1mRNA