Csa6G160690 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G160690
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 11227170 .. 11227980 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGAAAATGGAGGCGTCGTTGGTTTGGAAGTTGTCAAACTGAACGAAGCAATGGTGACTAGGAATTTGGAAGAGAAGGTGAATAAAACGGTGGTGGTGGCGATTGGGGATTTGGAAGAGACGGTGAACGAAGTGATCGGTGGTGCATTTTTGCAACCCTTCAACTCTTTCTTCTCCCCTTTGTAAATCTGTGAATTACATATGAGAGCTTAGTTTTTAACGGAGTATATGAAGTGTATTAAGAAGAATCAATTGTAATAAGGAGTATTAGGTGCATCAAGGTGTTTCAAGTGTATAAAAGGGTATTGATTGTATCAAAGAATATCATGGTGCATCAAGTGTATCAAGATCCAAAGGTTTTCAAGAAATGTCAAATGTATATCAAGTGCATCAAGGAGTATCAGATGTATTAAAAGATATTAATTATGTGTATAAAAAAATATTAAGTGTATTAGATATGTATTAAGTATGTATCAGGTGTATCAAATATATATTAGTAATGAGGGCATTTGTGACATCTTACATTTTATATATGTGGACTGAGTATTTTTTTTCTTTTTTGCTATTTTTGCAAATAATAAATTTGTATGTGCTATAGACTTAATTATTATAACTTATTTGATCTTCGTTTTTGGATTCGAGGTATTTTGCATTTTTCCTTTCTCCATCAAAACTCAGAGGCACCACACTTCCCCTGCTGTTACCACCACCCATCAGTCACCACACCACATATCTTTACAAGAGATTGTCTATAAACCCTAAAAAAGAGAAGAAAAGATTTCCATATTTCCGTTTGTCCGGGGCCTGA

mRNA sequence

ATGAATGAAAATGGAGGCGTCGTTGGTTTGGAAGTTGTCAAACTGAACGAAGCAATGGTGACTAGGAATTTGGAAGAGAAGGTGAATAAAACGGTGGTGGTGGCGATTGGGGATTTGGAAGAGACGGTGAACGAAGTGATCGGTGGTGCATTTTTGCAACCCTTCAACTCTTTCTTCTCCCCTTTGTATTTTGCATTTTTCCTTTCTCCATCAAAACTCAGAGGCACCACACTTCCCCTGCTGTTACCACCACCCATCAGTCACCACACCACATATCTTTACAAGAGATTGTCTATAAACCCTAAAAAAGAGAAGAAAAGATTTCCATATTTCCGTTTGTCCGGGGCCTGA

Coding sequence (CDS)

ATGAATGAAAATGGAGGCGTCGTTGGTTTGGAAGTTGTCAAACTGAACGAAGCAATGGTGACTAGGAATTTGGAAGAGAAGGTGAATAAAACGGTGGTGGTGGCGATTGGGGATTTGGAAGAGACGGTGAACGAAGTGATCGGTGGTGCATTTTTGCAACCCTTCAACTCTTTCTTCTCCCCTTTGTATTTTGCATTTTTCCTTTCTCCATCAAAACTCAGAGGCACCACACTTCCCCTGCTGTTACCACCACCCATCAGTCACCACACCACATATCTTTACAAGAGATTGTCTATAAACCCTAAAAAAGAGAAGAAAAGATTTCCATATTTCCGTTTGTCCGGGGCCTGA

Protein sequence

MNENGGVVGLEVVKLNEAMVTRNLEEKVNKTVVVAIGDLEETVNEVIGGAFLQPFNSFFSPLYFAFFLSPSKLRGTTLPLLLPPPISHHTTYLYKRLSINPKKEKKRFPYFRLSGA*
Homology
[Close]
BLAST of Csa6G160690 vs. TrEMBL
Match: A0A0A0KC01_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G160690 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 8.2e-59
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 1 

Query: 1   MNENGGVVGLEVVKLNEAMVTRNLEEKVNKTVVVAIGDLEETVNEVIGGAFLQPFNSFFS 60
           MNENGGVVGLEVVKLNEAMVTRNLEEKVNKTVVVAIGDLEETVNEVIGGAFLQPFNSFFS
Sbjct: 1   MNENGGVVGLEVVKLNEAMVTRNLEEKVNKTVVVAIGDLEETVNEVIGGAFLQPFNSFFS 60

Query: 61  PLYFAFFLSPSKLRGTTLPLLLPPPISHHTTYLYKRLSINPKKEKKRFPYFRLSGA 117
           PLYFAFFLSPSKLRGTTLPLLLPPPISHHTTYLYKRLSINPKKEKKRFPYFRLSGA
Sbjct: 61  PLYFAFFLSPSKLRGTTLPLLLPPPISHHTTYLYKRLSINPKKEKKRFPYFRLSGA 116

[Close]
BLAST of Csa6G160690 vs. NCBI nr
Match: gi|700191794|gb|KGN46998.1| (hypothetical protein Csa_6G160690 [Cucumis sativus])

HSP 1 Score: 234.2 bits (596), Expect = 1.2e-58
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 1 

Query: 1   MNENGGVVGLEVVKLNEAMVTRNLEEKVNKTVVVAIGDLEETVNEVIGGAFLQPFNSFFS 60
           MNENGGVVGLEVVKLNEAMVTRNLEEKVNKTVVVAIGDLEETVNEVIGGAFLQPFNSFFS
Sbjct: 1   MNENGGVVGLEVVKLNEAMVTRNLEEKVNKTVVVAIGDLEETVNEVIGGAFLQPFNSFFS 60

Query: 61  PLYFAFFLSPSKLRGTTLPLLLPPPISHHTTYLYKRLSINPKKEKKRFPYFRLSGA 117
           PLYFAFFLSPSKLRGTTLPLLLPPPISHHTTYLYKRLSINPKKEKKRFPYFRLSGA
Sbjct: 61  PLYFAFFLSPSKLRGTTLPLLLPPPISHHTTYLYKRLSINPKKEKKRFPYFRLSGA 116

The following BLAST results are available for this feature:
BLAST of Csa6G160690 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KC01_CUCSA8.2e-59100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G160690 PE=4 SV=1[more]
BLAST of Csa6G160690 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700191794|gb|KGN46998.1|1.2e-58100.00hypothetical protein Csa_6G160690 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU148698cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G160690.1Csa6G160690.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU148698CU148698transcribed_cluster