Csa6G128550 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G128550
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionRiboflavin synthase, alpha subunit; contains IPR001783 (Lumazine-binding protein), IPR023366 (ATPase, F1/A1 complex, alpha subunit, N-terminal), IPR026017 (Lumazine-binding domain)
LocationChr6 : 9030545 .. 9032636 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAACATTAGAATCTAGGGTTCTTTTTTCTTTTTTTCTTTTCTTCATTTACTCTCGCAAACGCATCACCCACACCCACGTCAAAAGGGAGCATCGTTCACACCTCACAAGCACAGCCCCCTTCGCCAGTTTGTGCCAGTTCGTTCACAACCCACCTCATCTCCGCCGCCCACCGGTAAGCTTTCTTTCCCCACTTTAATTGCTTTCAATGTTCTGAAAGCTCTTTCTGTCCTTTCTCTGCCCATGTGAAATGTGATGTGTGAAAATTCTCTACTTCTAGTTTAGCAAAATTTCCCGAGGGAAAAGCTATATCTATTTAGTTCTTTCTATGAGATTGTGGAAGAACAACAATTTTAATCTTGTTGCTTAACTTCTAAAATTCTTTTATTTGCTTTCAAAATAAAATCCCTTTTATGTCTAAAATACAGAACTCCACAACGAACTGATGGAACCAGACATACGGTTCGGTTCGGTTCGGTTTGAATTATGATAAAGGATTTACTAATTAGAGTTGAAGTACAAAGAAAATCAACAGCGGTCGATGTGTTTGCTCTCTTCTCTTTGACTTTCTTGGAGTCGAAGAACAATCCATTTCCATGCCTTTGCCTCCTCAACAATCAACAATTTATTAATCACTTTCTTCTCTCACCACTCCCACGTTCTATCTACTTCCTTATTTCCTTCATCTTCTTCCTCTTCTACTCTGCTTTCCTTTCAATTGTTTTTATTATTGGGTTTTTGTTGCTCCAGTTTTAGGGTTTTCAATTCCAATTTCTCACTCTACTTGAACTGAAACAGAGTCACAAAGAAATGTCTACTTTTTCTTCCCTCTCTACTGCTACATCACTCCCCAATATCCCCAGAATGCTTCCTCCAATAGGGAGTCTTCATCTCCCATCCTCCCATTTTTTCCCCAAGTTCAATTTCAATACCAAGACGTCTCTTTTCACTCTATTCACATCCACCCACAAGCCCCAACTGCGTTACAAATCTCGCCCAAGGGCCTCCGTTCAATGTCTTTTCACAGGCATTGTTGAAGAAATTGGCCATGTTAAAAGCTTGGGTATTAGTGAAAATGGGGGATTCGATTTGGAAATTAATGCAAAAACTGTTCTTGAAGGTGTTAACCTTGGAGATAGCATTGCTGTCAATGGAACTTGTCTTACTGTCACTGCTTTTGACCACCAACTATCTGAATTCAAGGTGGGGTTGGCGCCTGAGACGCTCAGGAAGACTTCATTGGTGGAACTCTCGCCTGGTTCACCTGTGAACTTGGAGAGGGCGGTTCAACCAATCAGCCGAATGGGTGGCCATTTTGTGCAGGGGCATGTGGATGGGACTGGGGAGATAATATCAATGGATCCTGAAGGGGATTCCTTGTGGATTAAGGTGAAGACATCAGAGGCTTTGCTGAATTACATTGTACCGAAGGGATTTATTGCTGTGGATGGGGCTAGCTTGACTGTGGTAGATGTTTTTGATGATGAGAAGGCTTTTAACTTCATGTTGGTTGCTTATACTCAGACAAATGTGGTCATTCCATTGAAGAAAGTTGGACATTTGGTGAATTTGGAGGTAGATATTCTTGGCAAGTATGTGCAAAGACTCCTCAGTAATGGTGCAGTCAAACCCATTGAGTCTCCATGATCACAAAGCCTGGAGGGAAAACAAAAAAGGTCCCAATAGTTGTAATCTCAATCTTCTTCTGCATAAAGTTTTTCTCCTGCCTCGTTATGTTTTTAACCATCATCAAACTTGAGACTGGGAATGAGTAAATGATCTGATGTTCTACTGTCTTATTGTCTCTGTTGTATTAAAACACGATTAGACGAGGTGACTACTTCTATTATGAAATTCAACCCTTTTTCAGTGAAGTAACGCTTAAACCTTTTTATGGGATTAGGGAAGAATAAAGGGTTTGATGTTCTTGATAGAATCCAAACTATATTAAAATATAAAGGATCAAAGCTTAGGATATGAGCCAAATAATATGAGAAACTTATACCCTCCCTTTCTTGAGATCACACTCAAGTCCTATATCTATCGAACCAGTTATTGTCATTGTTTCTTTTGAAACACGGCTAGGTCCATGC

mRNA sequence

ATGTCTACTTTTTCTTCCCTCTCTACTGCTACATCACTCCCCAATATCCCCAGAATGCTTCCTCCAATAGGGAGTCTTCATCTCCCATCCTCCCATTTTTTCCCCAAGTTCAATTTCAATACCAAGACGTCTCTTTTCACTCTATTCACATCCACCCACAAGCCCCAACTGCGTTACAAATCTCGCCCAAGGGCCTCCGTTCAATGTCTTTTCACAGGCATTGTTGAAGAAATTGGCCATGTTAAAAGCTTGGGTATTAGTGAAAATGGGGGATTCGATTTGGAAATTAATGCAAAAACTGTTCTTGAAGGTGTTAACCTTGGAGATAGCATTGCTGTCAATGGAACTTGTCTTACTGTCACTGCTTTTGACCACCAACTATCTGAATTCAAGGTGGGGTTGGCGCCTGAGACGCTCAGGAAGACTTCATTGGTGGAACTCTCGCCTGGTTCACCTGTGAACTTGGAGAGGGCGGTTCAACCAATCAGCCGAATGGGTGGCCATTTTGTGCAGGGGCATGTGGATGGGACTGGGGAGATAATATCAATGGATCCTGAAGGGGATTCCTTGTGGATTAAGGTGAAGACATCAGAGGCTTTGCTGAATTACATTGTACCGAAGGGATTTATTGCTGTGGATGGGGCTAGCTTGACTGTGGTAGATGTTTTTGATGATGAGAAGGCTTTTAACTTCATGTTGGTTGCTTATACTCAGACAAATGTGGTCATTCCATTGAAGAAAGTTGGACATTTGGTGAATTTGGAGGTAGATATTCTTGGCAAGTATGTGCAAAGACTCCTCAGTAATGGTGCAGTCAAACCCATTGAGTCTCCATGA

Coding sequence (CDS)

ATGTCTACTTTTTCTTCCCTCTCTACTGCTACATCACTCCCCAATATCCCCAGAATGCTTCCTCCAATAGGGAGTCTTCATCTCCCATCCTCCCATTTTTTCCCCAAGTTCAATTTCAATACCAAGACGTCTCTTTTCACTCTATTCACATCCACCCACAAGCCCCAACTGCGTTACAAATCTCGCCCAAGGGCCTCCGTTCAATGTCTTTTCACAGGCATTGTTGAAGAAATTGGCCATGTTAAAAGCTTGGGTATTAGTGAAAATGGGGGATTCGATTTGGAAATTAATGCAAAAACTGTTCTTGAAGGTGTTAACCTTGGAGATAGCATTGCTGTCAATGGAACTTGTCTTACTGTCACTGCTTTTGACCACCAACTATCTGAATTCAAGGTGGGGTTGGCGCCTGAGACGCTCAGGAAGACTTCATTGGTGGAACTCTCGCCTGGTTCACCTGTGAACTTGGAGAGGGCGGTTCAACCAATCAGCCGAATGGGTGGCCATTTTGTGCAGGGGCATGTGGATGGGACTGGGGAGATAATATCAATGGATCCTGAAGGGGATTCCTTGTGGATTAAGGTGAAGACATCAGAGGCTTTGCTGAATTACATTGTACCGAAGGGATTTATTGCTGTGGATGGGGCTAGCTTGACTGTGGTAGATGTTTTTGATGATGAGAAGGCTTTTAACTTCATGTTGGTTGCTTATACTCAGACAAATGTGGTCATTCCATTGAAGAAAGTTGGACATTTGGTGAATTTGGAGGTAGATATTCTTGGCAAGTATGTGCAAAGACTCCTCAGTAATGGTGCAGTCAAACCCATTGAGTCTCCATGA

Protein sequence

MSTFSSLSTATSLPNIPRMLPPIGSLHLPSSHFFPKFNFNTKTSLFTLFTSTHKPQLRYKSRPRASVQCLFTGIVEEIGHVKSLGISENGGFDLEINAKTVLEGVNLGDSIAVNGTCLTVTAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEIISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAYTQTNVVIPLKKVGHLVNLEVDILGKYVQRLLSNGAVKPIESP*
Homology
[Close]
BLAST of Csa6G128550 vs. Swiss-Prot
Match: RISA_SCHPO (Riboflavin synthase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rib5 PE=1 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 5.5e-46
Identity = 98/199 (49.25%), Postives = 135/199 (67.84%), Query Frame = 1 

Query: 70  LFTGIVEEIGHVKSLGISENGGFDLEINAKTVLEGVNLGDSIAVNGTCLTVTAFDHQLSE 129
           +FTG+VE IG VK +  + + GF ++I A  +L+  + GDSIAVNGTCLTVT FD     
Sbjct: 1   MFTGLVEAIGVVKDVQGTIDNGFAMKIEAPQILDDCHTGDSIAVNGTCLTVTDFDRY--H 60

Query: 130 FKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEIISMDPEGDS 189
           F VG+APE+LR T+L +   G PVNLERAV   +RMGGHFVQGHVD   EI+    +G++
Sbjct: 61  FTVGIAPESLRLTNLGQCKAGDPVNLERAVLSSTRMGGHFVQGHVDTVAEIVEKKQDGEA 120

Query: 190 LWIKVKTSEA-LLNYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAYTQTNVVIPLKKV 249
           +    +  +  +L YIV KG+IA+DG SLT+  V  D+  F+ M+++YTQ+ V++  K V
Sbjct: 121 IDFTFRPRDPFVLKYIVYKGYIALDGTSLTITHV--DDSTFSIMMISYTQSKVIMAKKNV 180

Query: 250 GHLVNLEVDILGKYVQRLL 268
           G LVN+EVD +GKY ++L+
Sbjct: 181 GDLVNVEVDQIGKYTEKLV 195

[Close]
BLAST of Csa6G128550 vs. Swiss-Prot
Match: RISA_ACTPL (Riboflavin synthase OS=Actinobacillus pleuropneumoniae GN=ribE PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 3.5e-45
Identity = 99/210 (47.14%), Postives = 136/210 (64.76%), Query Frame = 1 

Query: 70  LFTGIVEEIGHVKSLGISENGGFDL-EINAKTVLEGVNLGDSIAVNGTCLTVTAFDHQLS 129
           +FTGI+EE+G +    I + G F +  INA  VL+ V+LGD+IAVNG CLTVT+F    +
Sbjct: 1   MFTGIIEEVGKIAQ--IHKQGEFAVVTINATKVLQDVHLGDTIAVNGVCLTVTSFSS--N 60

Query: 130 EFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEIISMDPEGD 189
           +F   +  ETL++TSL EL   SPVNLERA+    R GGH V GH+DGTGEI  + P  +
Sbjct: 61  QFTADVMSETLKRTSLGELKSNSPVNLERAMAANGRFGGHIVSGHIDGTGEIAEITPAHN 120

Query: 190 SLWIKVKTSEALLNYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAYTQTNVVIPLKKV 249
           S W ++KTS  L+ YI+ KG I +DG SLTVVD   D+++F   ++ +T     +  KK+
Sbjct: 121 STWYRIKTSPKLMRYIIEKGSITIDGISLTVVDT--DDESFRVSIIPHTIKETNLGSKKI 180

Query: 250 GHLVNLEVDILGKYVQRLLSNGAVKPIESP 279
           G +VNLE DI+GKY+++ L     KP + P
Sbjct: 181 GSIVNLENDIVGKYIEQFLLK---KPADEP 201

[Close]
BLAST of Csa6G128550 vs. Swiss-Prot
Match: RISA_PICGU (Riboflavin synthase OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) GN=RIB5 PE=2 SV=3)

HSP 1 Score: 181.0 bits (458), Expect = 1.8e-44
Identity = 99/203 (48.77%), Postives = 129/203 (63.55%), Query Frame = 1 

Query: 70  LFTGIVEEIGHV-----KSLGISENGGFDLEI-NAKTVLEGVNLGDSIAVNGTCLTVTAF 129
           +FTG+VE IG V     K    S   G  + I +   +LE V LGDSI  NG CLTVT F
Sbjct: 1   MFTGLVEHIGTVLQVTEKDTTASGGDGVSMVIGDCSKILEDVQLGDSICTNGVCLTVTEF 60

Query: 130 DHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEIISM 189
           D   S+FKVG++PETLR++ L EL PGS VNLERAV+   RMGGH VQGHVD    I++ 
Sbjct: 61  DMARSQFKVGISPETLRRSDLGELKPGSKVNLERAVKADVRMGGHVVQGHVDTIATIVNR 120

Query: 190 DPEGDSLWIKVKTSEALL-NYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAYTQTNVV 249
             +G+++    K  ++    YIV KGFIA+DG SLTV DV  ++  F+  +V+YTQ  V+
Sbjct: 121 RGDGNAINFTFKLRDSQYGKYIVEKGFIAIDGTSLTVTDVDHEQSEFSISMVSYTQEKVI 180

Query: 250 IPLKKVGHLVNLEVDILGKYVQR 266
           +PLK  G  VN+EVD+ GK +++
Sbjct: 181 MPLKNSGDSVNIEVDLTGKLIEK 203


HSP 2 Score: 40.4 bits (93), Expect = 3.7e-02
Identity = 33/100 (33.00%), Postives = 45/100 (45.00%), Query Frame = 1 

Query: 111 IAVNGTCLTVTAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFV 170
           IA++GT LTVT  DH+ SEF + +   T  K  +   + G  VN+E              
Sbjct: 148 IAIDGTSLTVTDVDHEQSEFSISMVSYTQEKVIMPLKNSGDSVNIE-------------- 207

Query: 171 QGHVDGTGEIISMDPEGDSL-WIKVKTS--EALLNYIVPK 208
              VD TG++I    E   L +IK +TS    L+  +V K
Sbjct: 208 ---VDLTGKLIEKQIELSLLSYIKDETSPLSTLIGKLVEK 230

[Close]
BLAST of Csa6G128550 vs. Swiss-Prot
Match: RISA_YEAST (Riboflavin synthase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RIB5 PE=1 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.0e-39
Identity = 93/205 (45.37%), Postives = 129/205 (62.93%), Query Frame = 1 

Query: 70  LFTGIVEEIGHV---KSLGISENGGFDLEI---NAKTVLEGVNLGDSIAVNGTCLTVTAF 129
           +FTGIVE +G V        SE+GG  + I   NA ++L   ++GDSIAVNG CLTVT F
Sbjct: 1   MFTGIVECMGTVLENNPYDDSESGGQGVSITIGNAGSILTDCHVGDSIAVNGVCLTVTEF 60

Query: 130 DHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEIISM 189
           ++    FKVG++PET++++++     G+ VNLERAV    R GGH+VQGHVD    I+S 
Sbjct: 61  NND--SFKVGISPETIKRSNVASWIQGTQVNLERAVSQDVRFGGHYVQGHVDTVANIVSR 120

Query: 190 DPEGDSLWIKVK-TSEALLNYIVPKGFIAVDGASLTV--VDVFDDEKAFNFMLVAYTQTN 249
            PEG+S+    +   +    YIV KGFI +DG SLT+  VD      AF   ++ +TQ N
Sbjct: 121 RPEGNSIIFGFQLRDQEYFKYIVEKGFICIDGTSLTIIKVDPLSQGGAFYISMIKHTQDN 180

Query: 250 VVIPLKKVGHLVNLEVDILGKYVQR 266
           V++PLKK+G  VN+EVD+ GK +++
Sbjct: 181 VIMPLKKIGDEVNIEVDLTGKIIEK 203

[Close]
BLAST of Csa6G128550 vs. Swiss-Prot
Match: RISA_BACSU (Riboflavin synthase OS=Bacillus subtilis (strain 168) GN=ribE PE=1 SV=2)

HSP 1 Score: 154.5 bits (389), Expect = 1.8e-36
Identity = 85/198 (42.93%), Postives = 122/198 (61.62%), Query Frame = 1 

Query: 70  LFTGIVEEIGHVKSLGISENGGFDLEINAKTVLEGVNLGDSIAVNGTCLTVTAFDHQLSE 129
           +FTGI+EE G ++S+  + +    L I    +LE V+LGDSIAVNG CLTVT F    ++
Sbjct: 1   MFTGIIEETGTIESMKKAGHA-MALTIKCSKILEDVHLGDSIAVNGICLTVTDFTK--NQ 60

Query: 130 FKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEIISMDPEGDS 189
           F V + PET++ TSL +L+ GS VNLERA+    R GGHFV GHVDGT EI  ++ + ++
Sbjct: 61  FTVDVMPETVKATSLNDLTKGSKVNLERAMAANGRFGGHFVSGHVDGTAEITRIEEKSNA 120

Query: 190 LWIKVKTSEALLNYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAYTQTNVVIPLKKVG 249
           ++  +K   +L   +V KG I VDG SLT+  + +D       L+ +T +  +   K +G
Sbjct: 121 VYYDLKMDPSLTKTLVLKGSITVDGVSLTIFGLTED--TVTISLIPHTISETIFSEKTIG 180

Query: 250 HLVNLEVDILGKYVQRLL 268
             VN+E D++GKY+ R L
Sbjct: 181 SKVNIECDMIGKYMYRFL 193

[Close]
BLAST of Csa6G128550 vs. TrEMBL
Match: A0A0A0KAI5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G128550 PE=4 SV=1)

HSP 1 Score: 551.2 bits (1419), Expect = 7.2e-154
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 1 

Query: 1   MSTFSSLSTATSLPNIPRMLPPIGSLHLPSSHFFPKFNFNTKTSLFTLFTSTHKPQLRYK 60
           MSTFSSLSTATSLPNIPRMLPPIGSLHLPSSHFFPKFNFNTKTSLFTLFTSTHKPQLRYK
Sbjct: 1   MSTFSSLSTATSLPNIPRMLPPIGSLHLPSSHFFPKFNFNTKTSLFTLFTSTHKPQLRYK 60

Query: 61  SRPRASVQCLFTGIVEEIGHVKSLGISENGGFDLEINAKTVLEGVNLGDSIAVNGTCLTV 120
           SRPRASVQCLFTGIVEEIGHVKSLGISENGGFDLEINAKTVLEGVNLGDSIAVNGTCLTV
Sbjct: 61  SRPRASVQCLFTGIVEEIGHVKSLGISENGGFDLEINAKTVLEGVNLGDSIAVNGTCLTV 120

Query: 121 TAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI 180
           TAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI
Sbjct: 121 TAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI 180

Query: 181 ISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAYTQTN 240
           ISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAYTQTN
Sbjct: 181 ISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAYTQTN 240

Query: 241 VVIPLKKVGHLVNLEVDILGKYVQRLLSNGAVKPIESP 279
           VVIPLKKVGHLVNLEVDILGKYVQRLLSNGAVKPIESP
Sbjct: 241 VVIPLKKVGHLVNLEVDILGKYVQRLLSNGAVKPIESP 278

[Close]
BLAST of Csa6G128550 vs. TrEMBL
Match: L0C7R1_MOMCH (Riboflavin synthase OS=Momordica charantia PE=2 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 2.7e-124
Identity = 234/282 (82.98%), Postives = 252/282 (89.36%), Query Frame = 1 

Query: 1   MSTFSSLSTATSLPNIPRMLPPIGSLHLP----SSHFFPKFNFNTKTSLFTLFTSTHKPQ 60
           MSTFSSLSTAT+L  IP+M+PP G+  L     S HF  KF FNT  SLFTLFTS+ KPQ
Sbjct: 1   MSTFSSLSTATALSQIPKMVPPGGNTILNVRPGSPHFCLKFKFNTNRSLFTLFTSSCKPQ 60

Query: 61  LRYKSRPRASVQCLFTGIVEEIGHVKSLGISENGGFDLEINAKTVLEGVNLGDSIAVNGT 120
           LR KSRPR S+QCLFTGIVEE+G VK+LG++ENGGFDLEI AKTVLEGV+LGDSIAVNGT
Sbjct: 61  LRCKSRPRTSIQCLFTGIVEEMGRVKNLGVTENGGFDLEIVAKTVLEGVHLGDSIAVNGT 120

Query: 121 CLTVTAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDG 180
           CLTVTAFDH+LSEF VGLAPETLRKTSLVEL PGSPVNLERAVQPISRMGGHFVQGHVDG
Sbjct: 121 CLTVTAFDHELSEFTVGLAPETLRKTSLVELVPGSPVNLERAVQPISRMGGHFVQGHVDG 180

Query: 181 TGEIISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAY 240
           TGEIISM+PE DSLWIKV+TSE LL YIVPKGFIAVDG SLTVVDVFD+EKAFNFMLVAY
Sbjct: 181 TGEIISMEPEEDSLWIKVRTSEDLLKYIVPKGFIAVDGTSLTVVDVFDEEKAFNFMLVAY 240

Query: 241 TQTNVVIPLKKVGHLVNLEVDILGKYVQRLLSNGAVKPIESP 279
           TQ +VVIPLKKVG LVNLEVDILGKYVQRLLSNGA+ PI+SP
Sbjct: 241 TQNSVVIPLKKVGDLVNLEVDILGKYVQRLLSNGAITPIKSP 282

[Close]
BLAST of Csa6G128550 vs. TrEMBL
Match: A0A0A0KAI2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G128010 PE=4 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 1.2e-111
Identity = 221/278 (79.50%), Postives = 227/278 (81.65%), Query Frame = 1 

Query: 1   MSTFSSLSTATSLPNIPRMLPPIGSLHLPSSHFFPKFNFNTKTSLFTLFTSTHKPQLRYK 60
           MSTFS LSTATSL NIPRMLPP+G+LHLPSS FFP FNFNTKTSLFTLFTSTHKPQLRYK
Sbjct: 1   MSTFSYLSTATSLSNIPRMLPPMGNLHLPSSQFFPNFNFNTKTSLFTLFTSTHKPQLRYK 60

Query: 61  SRPRASVQCLFTGIVEEIGHVKSLGISENGGFDLEINAKTVLEGVNLGDSIAVNGTCLTV 120
           SRPRASVQCLFTGIVEEIGHVK+L                          I  NG     
Sbjct: 61  SRPRASVQCLFTGIVEEIGHVKNL-------------------------GIDENG----- 120

Query: 121 TAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI 180
             FD +++           RKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI
Sbjct: 121 -GFDLEIN---------ARRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI 180

Query: 181 ISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAYTQTN 240
           ISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAYTQTN
Sbjct: 181 ISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAYTQTN 238

Query: 241 VVIPLKKVGHLVNLEVDILGKYVQRLLSNGAVKPIESP 279
           VVIPLKKVGHLVNLEVDILGKYVQRLLSNGAVKPIESP
Sbjct: 241 VVIPLKKVGHLVNLEVDILGKYVQRLLSNGAVKPIESP 238

[Close]
BLAST of Csa6G128550 vs. TrEMBL
Match: M5VH27_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009738mg PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 7.8e-100
Identity = 192/277 (69.31%), Postives = 221/277 (79.78%), Query Frame = 1 

Query: 1   MSTFSSLSTATSLPNIPRMLPPIGSLHLPSSHFFPKFNFNTKTSLFTLFTSTHKPQLRYK 60
           +S   SL + T  P++ R +  +   H  +S     F+   K S  TLF ST +P    K
Sbjct: 4   VSASLSLPSRTPEPSV-RKMSILNKFHSVASRTHCNFDAIFKPSTLTLFISTQRPHAHIK 63

Query: 61  SRPRASVQCLFTGIVEEIGHVKSLGISENGGFDLEINAKTVLEGVNLGDSIAVNGTCLTV 120
           S PR +++CLFTGIVEE+G +K LG +ENGGFD++I AKTVLEGV+LGDSIAVNGTCLTV
Sbjct: 64  SPPRNTIRCLFTGIVEEMGQIKQLGTAENGGFDMKIGAKTVLEGVHLGDSIAVNGTCLTV 123

Query: 121 TAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI 180
           T FD QLS+F VGL+PETLRKTSL+EL PGS VNLERAVQP SRMGGHFVQGHVDGTGEI
Sbjct: 124 TEFDTQLSDFTVGLSPETLRKTSLIELEPGSLVNLERAVQPTSRMGGHFVQGHVDGTGEI 183

Query: 181 ISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAYTQTN 240
           +SMDPEGDSLWIKVK S+ LL Y+VPKGFIAVDG SLTVVDVFD E +FNFMLVAYTQ N
Sbjct: 184 VSMDPEGDSLWIKVKASKELLKYVVPKGFIAVDGTSLTVVDVFDKEDSFNFMLVAYTQQN 243

Query: 241 VVIPLKKVGHLVNLEVDILGKYVQRLLSNGAVKPIES 278
           VVIPLKKVG  VNLEVDILGKYV+RLLS+G V+ I+S
Sbjct: 244 VVIPLKKVGQKVNLEVDILGKYVERLLSSGFVESIKS 279

[Close]
BLAST of Csa6G128550 vs. TrEMBL
Match: A0A0J8BQF4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g206550 PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 2.7e-92
Identity = 181/267 (67.79%), Postives = 210/267 (78.65%), Query Frame = 1 

Query: 17  PRMLPPIGSLH----LPSSHFFPKFNFNTKTSLFTLFTSTHKPQLRYKSRPRAS-VQCLF 76
           P++  P  S+H    LPS+    K N      L  +F +T K     K +P  + + CLF
Sbjct: 12  PKISQPKLSIHNFYNLPSNGRL-KLNSEFNNPLPKIFLTTRKTHQTLKFQPHKNQINCLF 71

Query: 77  TGIVEEIGHVKSLGISENGGFDLEINAKTVLEGVNLGDSIAVNGTCLTVTAFDHQLSEFK 136
           TGIVEE+G VK LG +ENGGFDL+I AKTVLE V LGDSIAVNGTCLTVT F+ +LSEF 
Sbjct: 72  TGIVEEMGKVKHLGYAENGGFDLKIGAKTVLEDVKLGDSIAVNGTCLTVTEFNTELSEFT 131

Query: 137 VGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEIISMDPEGDSLW 196
           VGLAPETLRKTSL+EL PGS VNLERA+QP +RMGGHFVQGHVDGTGEI+S+DPEGDSLW
Sbjct: 132 VGLAPETLRKTSLIELEPGSAVNLERALQPSTRMGGHFVQGHVDGTGEIVSLDPEGDSLW 191

Query: 197 IKVKTSEALLNYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAYTQTNVVIPLKKVGHL 256
           +KVKTS  LL YIVPKGFIA+DG SLTVVDVFDDE  FNFML+AY+Q NVVIPLKKVG  
Sbjct: 192 VKVKTSRELLKYIVPKGFIAIDGTSLTVVDVFDDELCFNFMLIAYSQQNVVIPLKKVGQK 251

Query: 257 VNLEVDILGKYVQRLLSNGAVKPIESP 279
           +NLEVDILGKYV+RLLS+G +  ++SP
Sbjct: 252 LNLEVDILGKYVERLLSSGFLDSVKSP 277

[Close]
BLAST of Csa6G128550 vs. TAIR10
Match: AT2G20690.1 (AT2G20690.1 lumazine-binding family protein)

HSP 1 Score: 308.1 bits (788), Expect = 5.4e-84
Identity = 156/235 (66.38%), Postives = 189/235 (80.43%), Query Frame = 1 

Query: 36  KFNFNTKTSLFTLFTSTHKPQLRYKSRPRASVQCLFTGIVEEIGHVKSLGISENGGFDLE 95
           +F+  +K+S  +L TS  + +  ++ R   S++ +FTGIVEE+G VK LG++++GGFDL+
Sbjct: 31  RFDCVSKSSKLSLKTSCGRSRTHHR-RQNLSIRSVFTGIVEEMGEVKDLGMADHGGFDLK 90

Query: 96  INAKTVLEGVNLGDSIAVNGTCLTVTAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNL 155
           I A+ VLE V LGDSIAVNGTCLTVT F+ +  EF VGLAPETLRKTSL EL  GSPVNL
Sbjct: 91  IGARVVLEDVKLGDSIAVNGTCLTVTEFNAE--EFTVGLAPETLRKTSLEELKKGSPVNL 150

Query: 156 ERAVQPISRMGGHFVQGHVDGTGEIISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGA 215
           ERA+QP+SRMGGH VQGHVDGTG I SM+ EGDSLW+KVK  + LL YIVPKGF+AVDG 
Sbjct: 151 ERALQPVSRMGGHVVQGHVDGTGVIESMEVEGDSLWVKVKADKGLLKYIVPKGFVAVDGT 210

Query: 216 SLTVVDVFDDEKAFNFMLVAYTQTNVVIPLKKVGHLVNLEVDILGKYVQRLLSNG 271
           SLTVVDVFD+E  FNFM++AYTQ NVVIP KK+G  VNLEVDI+GKYV+RLL++G
Sbjct: 211 SLTVVDVFDEESCFNFMMIAYTQQNVVIPTKKIGQKVNLEVDIMGKYVERLLTSG 262

[Close]
BLAST of Csa6G128550 vs. NCBI nr
Match: gi|778712868|ref|XP_011656951.1| (PREDICTED: riboflavin synthase-like [Cucumis sativus])

HSP 1 Score: 551.2 bits (1419), Expect = 1.0e-153
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 1 

Query: 1   MSTFSSLSTATSLPNIPRMLPPIGSLHLPSSHFFPKFNFNTKTSLFTLFTSTHKPQLRYK 60
           MSTFSSLSTATSLPNIPRMLPPIGSLHLPSSHFFPKFNFNTKTSLFTLFTSTHKPQLRYK
Sbjct: 1   MSTFSSLSTATSLPNIPRMLPPIGSLHLPSSHFFPKFNFNTKTSLFTLFTSTHKPQLRYK 60

Query: 61  SRPRASVQCLFTGIVEEIGHVKSLGISENGGFDLEINAKTVLEGVNLGDSIAVNGTCLTV 120
           SRPRASVQCLFTGIVEEIGHVKSLGISENGGFDLEINAKTVLEGVNLGDSIAVNGTCLTV
Sbjct: 61  SRPRASVQCLFTGIVEEIGHVKSLGISENGGFDLEINAKTVLEGVNLGDSIAVNGTCLTV 120

Query: 121 TAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI 180
           TAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI
Sbjct: 121 TAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI 180

Query: 181 ISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAYTQTN 240
           ISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAYTQTN
Sbjct: 181 ISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAYTQTN 240

Query: 241 VVIPLKKVGHLVNLEVDILGKYVQRLLSNGAVKPIESP 279
           VVIPLKKVGHLVNLEVDILGKYVQRLLSNGAVKPIESP
Sbjct: 241 VVIPLKKVGHLVNLEVDILGKYVQRLLSNGAVKPIESP 278

[Close]
BLAST of Csa6G128550 vs. NCBI nr
Match: gi|659133869|ref|XP_008466932.1| (PREDICTED: riboflavin synthase, partial [Cucumis melo])

HSP 1 Score: 475.3 bits (1222), Expect = 7.2e-131
Identity = 237/248 (95.56%), Postives = 242/248 (97.58%), Query Frame = 1 

Query: 19  MLPPIGSLHLPSSHFFPKFNFNTKTSLFTLFTSTHKPQLRYKSRPRASVQCLFTGIVEEI 78
           MLPP+G+LHLPSS FFP FNFNTKTSLFTLFTSTHKPQL Y+SRPRASVQCLFTGIVEEI
Sbjct: 1   MLPPMGNLHLPSSQFFPNFNFNTKTSLFTLFTSTHKPQLCYRSRPRASVQCLFTGIVEEI 60

Query: 79  GHVKSLGISENGGFDLEINAKTVLEGVNLGDSIAVNGTCLTVTAFDHQLSEFKVGLAPET 138
           GHVK+LGI ENGG+DLEINAKTVLEGVNLGDSIAVNGTCLTVTAFDHQLSEFKVGLAPET
Sbjct: 61  GHVKNLGIGENGGYDLEINAKTVLEGVNLGDSIAVNGTCLTVTAFDHQLSEFKVGLAPET 120

Query: 139 LRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEIISMDPEGDSLWIKVKTSE 198
           LRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEIISMDPEGDSLWIKVKTSE
Sbjct: 121 LRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEIISMDPEGDSLWIKVKTSE 180

Query: 199 ALLNYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAYTQTNVVIPLKKVGHLVNLEVDI 258
           ALLNYIVPKGFIAVDG SLTVVDVFDDEKAFNFMLVAYTQ NVVIPLKKVGHLVNLEVDI
Sbjct: 181 ALLNYIVPKGFIAVDGTSLTVVDVFDDEKAFNFMLVAYTQKNVVIPLKKVGHLVNLEVDI 240

Query: 259 LGKYVQRL 267
           LGKYVQRL
Sbjct: 241 LGKYVQRL 248

[Close]
BLAST of Csa6G128550 vs. NCBI nr
Match: gi|429537129|gb|AFZ99647.1| (riboflavin synthase [Momordica charantia])

HSP 1 Score: 453.0 bits (1164), Expect = 3.8e-124
Identity = 234/282 (82.98%), Postives = 252/282 (89.36%), Query Frame = 1 

Query: 1   MSTFSSLSTATSLPNIPRMLPPIGSLHLP----SSHFFPKFNFNTKTSLFTLFTSTHKPQ 60
           MSTFSSLSTAT+L  IP+M+PP G+  L     S HF  KF FNT  SLFTLFTS+ KPQ
Sbjct: 1   MSTFSSLSTATALSQIPKMVPPGGNTILNVRPGSPHFCLKFKFNTNRSLFTLFTSSCKPQ 60

Query: 61  LRYKSRPRASVQCLFTGIVEEIGHVKSLGISENGGFDLEINAKTVLEGVNLGDSIAVNGT 120
           LR KSRPR S+QCLFTGIVEE+G VK+LG++ENGGFDLEI AKTVLEGV+LGDSIAVNGT
Sbjct: 61  LRCKSRPRTSIQCLFTGIVEEMGRVKNLGVTENGGFDLEIVAKTVLEGVHLGDSIAVNGT 120

Query: 121 CLTVTAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDG 180
           CLTVTAFDH+LSEF VGLAPETLRKTSLVEL PGSPVNLERAVQPISRMGGHFVQGHVDG
Sbjct: 121 CLTVTAFDHELSEFTVGLAPETLRKTSLVELVPGSPVNLERAVQPISRMGGHFVQGHVDG 180

Query: 181 TGEIISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAY 240
           TGEIISM+PE DSLWIKV+TSE LL YIVPKGFIAVDG SLTVVDVFD+EKAFNFMLVAY
Sbjct: 181 TGEIISMEPEEDSLWIKVRTSEDLLKYIVPKGFIAVDGTSLTVVDVFDEEKAFNFMLVAY 240

Query: 241 TQTNVVIPLKKVGHLVNLEVDILGKYVQRLLSNGAVKPIESP 279
           TQ +VVIPLKKVG LVNLEVDILGKYVQRLLSNGA+ PI+SP
Sbjct: 241 TQNSVVIPLKKVGDLVNLEVDILGKYVQRLLSNGAITPIKSP 282

[Close]
BLAST of Csa6G128550 vs. NCBI nr
Match: gi|700191536|gb|KGN46740.1| (hypothetical protein Csa_6G128010 [Cucumis sativus])

HSP 1 Score: 411.0 bits (1055), Expect = 1.7e-111
Identity = 221/278 (79.50%), Postives = 227/278 (81.65%), Query Frame = 1 

Query: 1   MSTFSSLSTATSLPNIPRMLPPIGSLHLPSSHFFPKFNFNTKTSLFTLFTSTHKPQLRYK 60
           MSTFS LSTATSL NIPRMLPP+G+LHLPSS FFP FNFNTKTSLFTLFTSTHKPQLRYK
Sbjct: 1   MSTFSYLSTATSLSNIPRMLPPMGNLHLPSSQFFPNFNFNTKTSLFTLFTSTHKPQLRYK 60

Query: 61  SRPRASVQCLFTGIVEEIGHVKSLGISENGGFDLEINAKTVLEGVNLGDSIAVNGTCLTV 120
           SRPRASVQCLFTGIVEEIGHVK+L                          I  NG     
Sbjct: 61  SRPRASVQCLFTGIVEEIGHVKNL-------------------------GIDENG----- 120

Query: 121 TAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI 180
             FD +++           RKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI
Sbjct: 121 -GFDLEIN---------ARRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI 180

Query: 181 ISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAYTQTN 240
           ISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAYTQTN
Sbjct: 181 ISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAYTQTN 238

Query: 241 VVIPLKKVGHLVNLEVDILGKYVQRLLSNGAVKPIESP 279
           VVIPLKKVGHLVNLEVDILGKYVQRLLSNGAVKPIESP
Sbjct: 241 VVIPLKKVGHLVNLEVDILGKYVQRLLSNGAVKPIESP 238

[Close]
BLAST of Csa6G128550 vs. NCBI nr
Match: gi|645246016|ref|XP_008229154.1| (PREDICTED: riboflavin synthase [Prunus mume])

HSP 1 Score: 374.0 bits (959), Expect = 2.3e-100
Identity = 193/277 (69.68%), Postives = 222/277 (80.14%), Query Frame = 1 

Query: 1   MSTFSSLSTATSLPNIPRMLPPIGSLHLPSSHFFPKFNFNTKTSLFTLFTSTHKPQLRYK 60
           +S+  SL + T  P++ R +  +   H  +S     FN   K S  TLF ST +P    K
Sbjct: 4   VSSSLSLPSRTPEPSV-RKMSILNKFHSVASRTHCNFNAIFKPSTLTLFISTQRPHAHIK 63

Query: 61  SRPRASVQCLFTGIVEEIGHVKSLGISENGGFDLEINAKTVLEGVNLGDSIAVNGTCLTV 120
           S PR +++CLFTGIVEE+G +K LG +ENGGFD++I AKTVLEGV+LGDSIAVNGTCLTV
Sbjct: 64  SPPRNTIRCLFTGIVEEMGQIKQLGTAENGGFDMKIGAKTVLEGVHLGDSIAVNGTCLTV 123

Query: 121 TAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI 180
           T FD QLS+F VGL+PETLRKTSL+EL PGS VNLERAVQP SRMGGHFVQGHVDGTGEI
Sbjct: 124 TEFDTQLSDFTVGLSPETLRKTSLIELEPGSLVNLERAVQPTSRMGGHFVQGHVDGTGEI 183

Query: 181 ISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAYTQTN 240
           +SMDPEGDSLWIKVK S+ LL Y+VPKGFIAVDG SLTVVDVFD E +FNFMLVAYTQ N
Sbjct: 184 VSMDPEGDSLWIKVKASKELLKYVVPKGFIAVDGTSLTVVDVFDKEDSFNFMLVAYTQQN 243

Query: 241 VVIPLKKVGHLVNLEVDILGKYVQRLLSNGAVKPIES 278
           VVIPLKKVG  VNLEVDILGKYV+RLLS+G V+ I+S
Sbjct: 244 VVIPLKKVGQKVNLEVDILGKYVERLLSSGFVESIKS 279

The following BLAST results are available for this feature:
BLAST of Csa6G128550 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RISA_SCHPO5.5e-4649.25Riboflavin synthase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ri... [more]
RISA_ACTPL3.5e-4547.14Riboflavin synthase OS=Actinobacillus pleuropneumoniae GN=ribE PE=3 SV=1[more]
RISA_PICGU1.8e-4448.77Riboflavin synthase OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / D... [more]
RISA_YEAST1.0e-3945.37Riboflavin synthase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=... [more]
RISA_BACSU1.8e-3642.93Riboflavin synthase OS=Bacillus subtilis (strain 168) GN=ribE PE=1 SV=2[more]
BLAST of Csa6G128550 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KAI5_CUCSA7.2e-154100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G128550 PE=4 SV=1[more]
L0C7R1_MOMCH2.7e-12482.98Riboflavin synthase OS=Momordica charantia PE=2 SV=1[more]
A0A0A0KAI2_CUCSA1.2e-11179.50Uncharacterized protein OS=Cucumis sativus GN=Csa_6G128010 PE=4 SV=1[more]
M5VH27_PRUPE7.8e-10069.31Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009738mg PE=4 SV=1[more]
A0A0J8BQF4_BETVU2.7e-9267.79Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g206550 PE=4 S... [more]
BLAST of Csa6G128550 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G20690.15.4e-8466.38 lumazine-binding family protein[more]
BLAST of Csa6G128550 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778712868|ref|XP_011656951.1|1.0e-153100.00PREDICTED: riboflavin synthase-like [Cucumis sativus][more]
gi|659133869|ref|XP_008466932.1|7.2e-13195.56PREDICTED: riboflavin synthase, partial [Cucumis melo][more]
gi|429537129|gb|AFZ99647.1|3.8e-12482.98riboflavin synthase [Momordica charantia][more]
gi|700191536|gb|KGN46740.1|1.7e-11179.50hypothetical protein Csa_6G128010 [Cucumis sativus][more]
gi|645246016|ref|XP_008229154.1|2.3e-10069.68PREDICTED: riboflavin synthase [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001783Lumazine-bd
IPR017938Riboflavin_synthase-like_b-brl
IPR023366ATP_synth_asu-like_sf
IPR026017Lumazine-bd_dom
IPR001783Lumazine-bd
IPR017938Riboflavin_synthase-like_b-brl
IPR023366ATP_synth_asu-like_sf
IPR026017Lumazine-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0009231 riboflavin biosynthetic process
cellular_component GO:0009507 chloroplast
cellular_component GO:0009349 riboflavin synthase complex
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0004746 riboflavin synthase activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU115864cucumber EST collection version 3.0transcribed_cluster
CU128001cucumber EST collection version 3.0transcribed_cluster
CU137430cucumber EST collection version 3.0transcribed_cluster
CU142308cucumber EST collection version 3.0transcribed_cluster
CU144976cucumber EST collection version 3.0transcribed_cluster
CU158380cucumber EST collection version 3.0transcribed_cluster
Relationships

The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU144976CU144976transcribed_cluster
CU158380CU158380transcribed_cluster
CU137430CU137430transcribed_cluster
CU142308CU142308transcribed_cluster
CU115864CU115864transcribed_cluster
CU128001CU128001transcribed_cluster


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G128550.2Csa6G128550.2mRNA
Csa6G128550.1Csa6G128550.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001783Lumazine-binding proteinPANTHERPTHR21098RIBOFLAVIN SYNTHASE ALPHA CHAINcoord: 54..268
score: 1.3E
IPR001783Lumazine-binding proteinTIGRFAMsTIGR00187TIGR00187coord: 70..270
score: 8.5
IPR017938Riboflavin synthase-like beta-barrelunknownSSF63380Riboflavin synthase domain-likecoord: 164..268
score: 1.87E-28coord: 70..160
score: 6.8
IPR023366ATP synthase subunit alpha-like domainGENE3DG3DSA:2.40.30.20coord: 74..175
score: 1.0E-29coord: 176..268
score: 9.7
IPR026017Lumazine-binding domainPFAMPF00677Lum_bindingcoord: 72..158
score: 2.0E-22coord: 171..257
score: 1.2
IPR026017Lumazine-binding domainPROFILEPS51177LUMAZINE_BINDcoord: 169..267
score: 22.099coord: 70..168
score: 25
NoneNo IPR availablePANTHERPTHR21098:SF0RIBOFLAVIN SYNTHASEcoord: 54..268
score: 1.3E