Csa6G121970 (gene) Cucumber (Chinese Long) v2

NameCsa6G121970
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionPutative MYB transcription factor; contains IPR009057 (Homeodomain-like)
LocationChr6 : 8446955 .. 8448236 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCTTAATTAGAGATTGATATATGAGTTTATGTCATACTTTCACTCACTACTCTCTCTCTCCCTCTCTCTTTGTATGTGTGTCTCACAAACAAACAACAACAACATAATGGTGCGAGCTCCTGTTGTTGATAAGGATGGAGTCAAGAGAGGTGCTTGGAGTTTGGAAGAAGATCAAAAGCTTAGAGCTTACATCGAGAAATACGGCCCTTGGAAATGGCGGGAGGTTCCAAGGCTTGCAGGTACTTAAACCTACTTTGCAATCCGCATTTGTTTAAATTGACTTTTAAATATTCAAAAAGTGATCATATCTAACCCTTAGTTAATTTAATTTTGATGCGGAATTTTCTGCAGGATTGATGAGATGTGGGAAGAGTTGTAGACTGAGATGGTTGAATTATCTTCGTCCGGGTCTTAAGCGAGGAAACTACACAAATGAAGAAAATGAATTAATCTGCAAATTGCATCAAACGCATGGAAATAGGTACGTATCAAAATGAAGTAAAAAATCGGAGATAGTTTGAATGAATTATATTGTATTGTATAATTATGAACAAATAATATAATATAACTAATGAAATCATGTATTTATTTAATGTTTGAAGATGGTCAACTATCGCCGCAAAGTTACCCGGAAGAACAGACAACGAAGTAAAGAATTATTGGAATGCTCACTTAAAGAAACAAGTGAAGCCGAAAACAGAATCATCAACAAAACATGAGGGAAAACCAAAGGATCTAAGTTTGTCTCATGTTTATGAAGCAAAAACATCAAAGGACTTCGCGGAGTACTGTTCAAGCACATTTGGGATCCTAGAAAGCAGCTCATGTTTGTCCCAACAAACATCTTCAAGTGATGATAATTTTGGGACTGTAATAAATTGGAGAATGGAAGACTATAATATTGATCAGCTGCAGATCAGTGGGTACTATGATGATTTCTGGACAGAACCATATGTTTGGGATCACAATGAAACAAATGCATTCTCAGTAGACTATGGAATTGAAATGTTTTCTCCTCAACAACAATATGAAACAGCCTACGACCATAATTACTGTGATTTGTTCTGCTAGCTACTTTTCTTGGTGTTCATATTAGAAACATCCAACCATATTGTTTCTAATTTCCTACTTTATACAGATGTTATGTATGATCATCATGCATTTGGAAGATTGTACATTAGTTGTTGTCCATATTTTTCCAAAACTCTTGGAATATGCCACTTTAAGGAAAACTGAGATTTTGAAGGGCGGAGCAGGTGCATTCAAATTTGTAAATCAGCC

mRNA sequence

ATGTCATACTTTCACTCACTACTCTCTCTCTCCCTCTCTCTTTGTATGTGTGTCTCACAAACAAACAACAACAACATAATGGTGCGAGCTCCTGTTGTTGATAAGGATGGAGTCAAGAGAGGTGCTTGGAGTTTGGAAGAAGATCAAAAGCTTAGAGCTTACATCGAGAAATACGGCCCTTGGAAATGGCGGGAGGTTCCAAGGCTTGCAGGATTGATGAGATGTGGGAAGAGTTGTAGACTGAGATGGTTGAATTATCTTCGTCCGGGTCTTAAGCGAGGAAACTACACAAATGAAGAAAATGAATTAATCTGCAAATTGCATCAAACGCATGGAAATAGATGGTCAACTATCGCCGCAAAGTTACCCGGAAGAACAGACAACGAAGTAAAGAATTATTGGAATGCTCACTTAAAGAAACAAGTGAAGCCGAAAACAGAATCATCAACAAAACATGAGGGAAAACCAAAGGATCTAAGTTTGTCTCATGTTTATGAAGCAAAAACATCAAAGGACTTCGCGGAGTACTGTTCAAGCACATTTGGGATCCTAGAAAGCAGCTCATGTTTGTCCCAACAAACATCTTCAAGTGATGATAATTTTGGGACTGTAATAAATTGGAGAATGGAAGACTATAATATTGATCAGCTGCAGATCAGTGGGTACTATGATGATTTCTGGACAGAACCATATGTTTGGGATCACAATGAAACAAATGCATTCTCAGTAGACTATGGAATTGAAATGTTTTCTCCTCAACAACAATATGAAACAGCCTACGACCATAATTACTGTGATTTGTTCTGCTAG

Coding sequence (CDS)

ATGTCATACTTTCACTCACTACTCTCTCTCTCCCTCTCTCTTTGTATGTGTGTCTCACAAACAAACAACAACAACATAATGGTGCGAGCTCCTGTTGTTGATAAGGATGGAGTCAAGAGAGGTGCTTGGAGTTTGGAAGAAGATCAAAAGCTTAGAGCTTACATCGAGAAATACGGCCCTTGGAAATGGCGGGAGGTTCCAAGGCTTGCAGGATTGATGAGATGTGGGAAGAGTTGTAGACTGAGATGGTTGAATTATCTTCGTCCGGGTCTTAAGCGAGGAAACTACACAAATGAAGAAAATGAATTAATCTGCAAATTGCATCAAACGCATGGAAATAGATGGTCAACTATCGCCGCAAAGTTACCCGGAAGAACAGACAACGAAGTAAAGAATTATTGGAATGCTCACTTAAAGAAACAAGTGAAGCCGAAAACAGAATCATCAACAAAACATGAGGGAAAACCAAAGGATCTAAGTTTGTCTCATGTTTATGAAGCAAAAACATCAAAGGACTTCGCGGAGTACTGTTCAAGCACATTTGGGATCCTAGAAAGCAGCTCATGTTTGTCCCAACAAACATCTTCAAGTGATGATAATTTTGGGACTGTAATAAATTGGAGAATGGAAGACTATAATATTGATCAGCTGCAGATCAGTGGGTACTATGATGATTTCTGGACAGAACCATATGTTTGGGATCACAATGAAACAAATGCATTCTCAGTAGACTATGGAATTGAAATGTTTTCTCCTCAACAACAATATGAAACAGCCTACGACCATAATTACTGTGATTTGTTCTGCTAG

Protein sequence

MSYFHSLLSLSLSLCMCVSQTNNNNIMVRAPVVDKDGVKRGAWSLEEDQKLRAYIEKYGPWKWREVPRLAGLMRCGKSCRLRWLNYLRPGLKRGNYTNEENELICKLHQTHGNRWSTIAAKLPGRTDNEVKNYWNAHLKKQVKPKTESSTKHEGKPKDLSLSHVYEAKTSKDFAEYCSSTFGILESSSCLSQQTSSSDDNFGTVINWRMEDYNIDQLQISGYYDDFWTEPYVWDHNETNAFSVDYGIEMFSPQQQYETAYDHNYCDLFC*
BLAST of Csa6G121970 vs. Swiss-Prot
Match: MYB4_ARATH (Transcription repressor MYB4 OS=Arabidopsis thaliana GN=MYB4 PE=1 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 3.0e-41
Identity = 77/143 (53.85%), Postives = 99/143 (69.23%), Query Frame = 1

Query: 27  MVRAPVVDKDGVKRGAWSLEEDQKLRAYIEKYGPWKWREVPRLAGLMRCGKSCRLRWLNY 86
           M R+P  +K    +GAW+ EED++L AYI+ +G   WR +P+ AGL+RCGKSCRLRW+NY
Sbjct: 1   MGRSPCCEKAHTNKGAWTKEEDERLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 87  LRPGLKRGNYTNEENELICKLHQTHGNRWSTIAAKLPGRTDNEVKNYWNAHLKKQV---- 146
           LRP LKRGN+T EE+ELI KLH   GN+WS IA +LPGRTDNE+KNYWN H+++++    
Sbjct: 61  LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLINRG 120

Query: 147 ------KPKTESSTKHEGKPKDL 160
                 +P  ESS   + KP  L
Sbjct: 121 IDPTSHRPIQESSASQDSKPTQL 143

BLAST of Csa6G121970 vs. Swiss-Prot
Match: MYB1_MAIZE (Myb-related protein Zm1 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 6.7e-41
Identity = 88/197 (44.67%), Postives = 117/197 (59.39%), Query Frame = 1

Query: 29  RAPVVDKDGVKRGAWSLEEDQKLRAYIEKYGPWKWREVPRLAGLMRCGKSCRLRWLNYLR 88
           RAP   K G+ RG+W+ +ED +L AYI+K+G   WR +P+ AGL+RCGKSCRLRW+NYLR
Sbjct: 5   RAPCCAKVGLNRGSWTPQEDMRLIAYIQKHGHTNWRALPKQAGLLRCGKSCRLRWINYLR 64

Query: 89  PGLKRGNYTNEENELICKLHQTHGNRWSTIAAKLPGRTDNEVKNYWNAHLKKQV----KP 148
           P LKRGN+T+EE E I +LH   GN+WS IAA LPGRTDNE+KN WN HLKK+V    K 
Sbjct: 65  PDLKRGNFTDEEEEAIIRLHGLLGNKWSKIAACLPGRTDNEIKNVWNTHLKKKVAQREKK 124

Query: 149 KTESSTKHEGKPKDLSLSHVYEAKTSKDFAEYCSSTFGILESSSCLSQQTSSSDDNFGTV 208
           K  + +   G P    LS    + T+       +S+ G      C + +   + D    V
Sbjct: 125 KAGAGSGDAGTPATAPLSSATSSTTTH------NSSGGSDSGDQCGTSREPDATD----V 184

Query: 209 INWRMEDYNIDQLQISG 222
              + ED ++  + + G
Sbjct: 185 CTLQPEDMDVSDMLVDG 191

BLAST of Csa6G121970 vs. Swiss-Prot
Match: MYB32_ARATH (Transcription factor MYB32 OS=Arabidopsis thaliana GN=MYB32 PE=2 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 8.7e-41
Identity = 79/149 (53.02%), Postives = 100/149 (67.11%), Query Frame = 1

Query: 27  MVRAPVVDKDGVKRGAWSLEEDQKLRAYIEKYGPWKWREVPRLAGLMRCGKSCRLRWLNY 86
           M R+P  +KD   +GAW+ EED KL +YI+ +G   WR +PR AGL RCGKSCRLRW+NY
Sbjct: 1   MGRSPCCEKDHTNKGAWTKEEDDKLISYIKAHGEGCWRSLPRSAGLQRCGKSCRLRWINY 60

Query: 87  LRPGLKRGNYTNEENELICKLHQTHGNRWSTIAAKLPGRTDNEVKNYWNAHLKKQVKPKT 146
           LRP LKRGN+T EE++LI KLH   GN+WS IA +LPGRTDNE+KNYWN H+K+++  K 
Sbjct: 61  LRPDLKRGNFTLEEDDLIIKLHSLLGNKWSLIATRLPGRTDNEIKNYWNTHVKRKLLRKG 120

Query: 147 ESSTKHEGKPKDLSLSHVYEAKTSKDFAE 176
                H           + E KTS+D ++
Sbjct: 121 IDPATHR---------PINETKTSQDSSD 140

BLAST of Csa6G121970 vs. Swiss-Prot
Match: MYB1_HORVU (Myb-related protein Hv1 OS=Hordeum vulgare GN=MYB1 PE=2 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 4.3e-40
Identity = 72/138 (52.17%), Postives = 97/138 (70.29%), Query Frame = 1

Query: 27  MVRAPVVDKDGVKRGAWSLEEDQKLRAYIEKYGPWKWREVPRLAGLMRCGKSCRLRWLNY 86
           M R+P  +K    +GAW+ EED +L AYI+ +G   WR +P+ AGL+RCGKSCRLRW+NY
Sbjct: 1   MGRSPCCEKAHTNKGAWTKEEDDRLTAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 87  LRPGLKRGNYTNEENELICKLHQTHGNRWSTIAAKLPGRTDNEVKNYWNAHLKKQVKPKT 146
           LRP LKRGN+++EE+ELI KLH   GN+WS IA +LPGRTDNE+KNYWN H+++++  + 
Sbjct: 61  LRPDLKRGNFSHEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLTSRG 120

Query: 147 ESSTKHEGKPKDLSLSHV 165
                H     D + S++
Sbjct: 121 IDPVTHRAINSDHAASNI 138

BLAST of Csa6G121970 vs. Swiss-Prot
Match: MYB3_ARATH (Transcription factor MYB3 OS=Arabidopsis thaliana GN=MYB3 PE=1 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 4.3e-40
Identity = 74/126 (58.73%), Postives = 90/126 (71.43%), Query Frame = 1

Query: 27  MVRAPVVDKDGVKRGAWSLEEDQKLRAYIEKYGPWKWREVPRLAGLMRCGKSCRLRWLNY 86
           M R+P  +K  + +GAW+ EEDQ L  YI K+G   WR +PR AGL RCGKSCRLRW+NY
Sbjct: 1   MGRSPCCEKAHMNKGAWTKEEDQLLVDYIRKHGEGCWRSLPRAAGLQRCGKSCRLRWMNY 60

Query: 87  LRPGLKRGNYTNEENELICKLHQTHGNRWSTIAAKLPGRTDNEVKNYWNAHLKKQVKPKT 146
           LRP LKRGN+T EE+ELI KLH   GN+WS IA +LPGRTDNE+KNYWN H+K+++  + 
Sbjct: 61  LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLSRG 120

Query: 147 ESSTKH 153
                H
Sbjct: 121 IDPNSH 126

BLAST of Csa6G121970 vs. TrEMBL
Match: A0A0A0KAD1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G121970 PE=4 SV=1)

HSP 1 Score: 576.2 bits (1484), Expect = 2.0e-161
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 1

Query: 1   MSYFHSLLSLSLSLCMCVSQTNNNNIMVRAPVVDKDGVKRGAWSLEEDQKLRAYIEKYGP 60
           MSYFHSLLSLSLSLCMCVSQTNNNNIMVRAPVVDKDGVKRGAWSLEEDQKLRAYIEKYGP
Sbjct: 1   MSYFHSLLSLSLSLCMCVSQTNNNNIMVRAPVVDKDGVKRGAWSLEEDQKLRAYIEKYGP 60

Query: 61  WKWREVPRLAGLMRCGKSCRLRWLNYLRPGLKRGNYTNEENELICKLHQTHGNRWSTIAA 120
           WKWREVPRLAGLMRCGKSCRLRWLNYLRPGLKRGNYTNEENELICKLHQTHGNRWSTIAA
Sbjct: 61  WKWREVPRLAGLMRCGKSCRLRWLNYLRPGLKRGNYTNEENELICKLHQTHGNRWSTIAA 120

Query: 121 KLPGRTDNEVKNYWNAHLKKQVKPKTESSTKHEGKPKDLSLSHVYEAKTSKDFAEYCSST 180
           KLPGRTDNEVKNYWNAHLKKQVKPKTESSTKHEGKPKDLSLSHVYEAKTSKDFAEYCSST
Sbjct: 121 KLPGRTDNEVKNYWNAHLKKQVKPKTESSTKHEGKPKDLSLSHVYEAKTSKDFAEYCSST 180

Query: 181 FGILESSSCLSQQTSSSDDNFGTVINWRMEDYNIDQLQISGYYDDFWTEPYVWDHNETNA 240
           FGILESSSCLSQQTSSSDDNFGTVINWRMEDYNIDQLQISGYYDDFWTEPYVWDHNETNA
Sbjct: 181 FGILESSSCLSQQTSSSDDNFGTVINWRMEDYNIDQLQISGYYDDFWTEPYVWDHNETNA 240

Query: 241 FSVDYGIEMFSPQQQYETAYDHNYCDLFC 270
           FSVDYGIEMFSPQQQYETAYDHNYCDLFC
Sbjct: 241 FSVDYGIEMFSPQQQYETAYDHNYCDLFC 269

BLAST of Csa6G121970 vs. TrEMBL
Match: A0A068UUA9_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00035177001 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 2.6e-52
Identity = 104/221 (47.06%), Postives = 143/221 (64.71%), Query Frame = 1

Query: 27  MVRAPVVDKDGVKRGAWSLEEDQKLRAYIEKYGPWKWREVPRLAGLMRCGKSCRLRWLNY 86
           MVRAP VDK+GVK+GAWS EED KLRAY+ +YG W WR++P+ AGL RCGKSCRLRW+NY
Sbjct: 1   MVRAPSVDKNGVKKGAWSEEEDNKLRAYVLRYGHWNWRQLPKFAGLSRCGKSCRLRWMNY 60

Query: 87  LRPGLKRGNYTNEENELICKLHQTHGNRWSTIAAKLPGRTDNEVKNYWNAHLKKQVKPK- 146
           L+PG++RG YT EE +LI KLH+ +GNRWS IAAKLPGRTDN++KN+W+ HLKK+ K   
Sbjct: 61  LKPGVRRGKYTIEEEDLIIKLHEQYGNRWSAIAAKLPGRTDNDIKNHWHTHLKKRNKQTQ 120

Query: 147 -TESSTKHEGKPKDLSLSHVYEAKTSKDFAEYCSSTFGILESSSCLSQQTS-SSDDNFGT 206
            +E S   +   ++   S +  + +S D            +S    +  +S S D     
Sbjct: 121 LSERSQNMDDADQNEQSSAMSTSGSSTDQKREMDPNASAADSLDAYTDISSLSCDSTLFD 180

Query: 207 VINWRMEDYNIDQLQISGYYDDFWTEPYVWDHNETNAFSVD 245
            ++W  +D N     ++  ++ FWTEP+  D + +N  SVD
Sbjct: 181 CVDWVADDSNSSVESLTEPFESFWTEPFALDTSFSNYISVD 221

BLAST of Csa6G121970 vs. TrEMBL
Match: A0A068UTL8_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00035175001 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.3e-51
Identity = 102/218 (46.79%), Postives = 141/218 (64.68%), Query Frame = 1

Query: 27  MVRAPVVDKDGVKRGAWSLEEDQKLRAYIEKYGPWKWREVPRLAGLMRCGKSCRLRWLNY 86
           MVRAP VDK+G+K+GAWS EED KLRAY+ +YG W WR++P+ AGL RCGKSCRLRW+NY
Sbjct: 1   MVRAPSVDKNGMKKGAWSEEEDNKLRAYVLRYGHWNWRQLPKFAGLSRCGKSCRLRWMNY 60

Query: 87  LRPGLKRGNYTNEENELICKLHQTHGNRWSTIAAKLPGRTDNEVKNYWNAHLKKQVK--P 146
           L+PG++RG YT EE +LI KLH+ +GNRWS IAAKLP RTDN++KN+W+ HLKK+ K  P
Sbjct: 61  LKPGVRRGKYTIEEEDLIIKLHEQYGNRWSAIAAKLPARTDNDIKNHWHTHLKKRYKESP 120

Query: 147 KTESSTKHEGKPKDLSLSHVYEAKTSKDFAEYCSSTFGILESSSCLSQQTS-SSDDNFGT 206
             E S   +   ++   S ++ + +S D       T    +S    +  +S S D     
Sbjct: 121 ICEGSQHIDDADQNEQSSAMFTSGSSTDQKTEVDPTTSASDSLDAYTDISSLSCDSTLFD 180

Query: 207 VINWRMEDYNIDQLQISGYYDDFWTEPYVWDHNETNAF 242
            ++W  +D N     ++  ++ FWTEP+  D +  N F
Sbjct: 181 GVDWAADDSNSSVESLTEPFESFWTEPFALDTSFNNWF 218

BLAST of Csa6G121970 vs. TrEMBL
Match: A0A0B2S367_GLYSO (Myb-related protein Myb4 OS=Glycine soja GN=glysoja_017220 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.3e-51
Identity = 109/247 (44.13%), Postives = 159/247 (64.37%), Query Frame = 1

Query: 27  MVRAPVVDKDGVKRGAWSLEEDQKLRAYIEKYGPWKWREVPRLAGLMRCGKSCRLRWLNY 86
           MVRAP  DK+G+K+GAWS EED+KL AY++++G   WR++P+ AGL RCGKSCRLRWLNY
Sbjct: 1   MVRAPFYDKNGLKKGAWSREEDEKLTAYVKRHGHSNWRQLPKFAGLARCGKSCRLRWLNY 60

Query: 87  LRPGLKRGNYTNEENELICKLHQTHGNRWSTIAAKLPGRTDNEVKNYWNAHLKKQVKPKT 146
           LRP LK GNYT EE ++I KLHQ  GN+WS IA KLPGRTDNEVKNYW+ HLKK +K   
Sbjct: 61  LRPNLKHGNYTLEEEKIIIKLHQEFGNKWSLIAEKLPGRTDNEVKNYWHGHLKK-IKSNE 120

Query: 147 ESSTKHEGKPK---DLSLSHVYEA-KTSKDFAEYCSSTFGILESSSCLSQQTSSSDDNFG 206
            +++K + KP    +++ +  ++  K+   +A+       ILESS  +S++++S  DN+ 
Sbjct: 121 ITTSKLKSKPGYSIEVNSNETHQCEKSESPYADVGDDFPYILESSLAMSRESTSEGDNYS 180

Query: 207 --TVINWRMEDYNIDQ-------LQISGYYDDFWTEPYVWDHNETNAFSVDYGIEMFSPQ 261
             ++++    D ++ +       +    +  DFWTEP++ +   TN      GI +  P 
Sbjct: 181 LTSIVSLSTMDSSLSKEESVPPLVSYEEFSSDFWTEPFLTEDTFTNEICSGEGIALLIP- 240

BLAST of Csa6G121970 vs. TrEMBL
Match: B9INU4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s14130g PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 2.9e-51
Identity = 115/224 (51.34%), Postives = 138/224 (61.61%), Query Frame = 1

Query: 27  MVRAPVVDKDGVKRGAWSLEEDQKLRAYIEKYGPWKWREVPRLAGLMRCGKSCRLRWLNY 86
           MVRAP  DK+GVK+GAWS EED KLR +IEKYG W WRE+P+ AGL RCGKSCRLRW+NY
Sbjct: 1   MVRAPYFDKNGVKKGAWSEEEDDKLREHIEKYGLWNWREIPKFAGLSRCGKSCRLRWMNY 60

Query: 87  LRPGLKRGNYTNEENELICKLHQTHGNRWSTIAAKLPGRTDNEVKNYWNAHLKKQVKPKT 146
           LRP +K GNYT EE +LI KLH+ HGN+WS IAAKLPGRTDNEVKNYW+AHLKK+   K 
Sbjct: 61  LRPDVKHGNYTKEEEDLILKLHEKHGNKWSIIAAKLPGRTDNEVKNYWHAHLKKRTVEKQ 120

Query: 147 ES---STKHEGKPKDLSLSHVYEAKTSKDFAEYCSSTFGILESSSCLSQQTSSSD----- 206
            +     K  G   +   S + +   +K    Y  S   ILES+  LS +TS S+     
Sbjct: 121 NTLVLKEKSSGFTSESEGSQMNKEMEAKTVVSYTPSN-PILESTP-LSPETSCSELSNLS 180

Query: 207 --------DNFGTVINWRMEDYNIDQLQISGYYDDFWTEPYVWD 235
                    + GT  N   ED             +FWTEP+V D
Sbjct: 181 TDFAPKLPVSAGTNRNNIAEDVLSSVPTFDESIGNFWTEPFVAD 222

BLAST of Csa6G121970 vs. TAIR10
Match: AT3G12820.1 (AT3G12820.1 myb domain protein 10)

HSP 1 Score: 174.9 bits (442), Expect = 6.9e-44
Identity = 94/221 (42.53%), Postives = 131/221 (59.28%), Query Frame = 1

Query: 29  RAPVVDKDGVKRGAWSLEEDQKLRAYIEKYGPWKWREVPRLAGLMRCGKSCRLRWLNYLR 88
           RAP  DK  VKRG WS EE ++LR++I K G   WR +P+LAGLMRCGKSCRLRW+NYLR
Sbjct: 5   RAPCCDKSQVKRGPWSDEESERLRSFILKNGHQNWRSLPKLAGLMRCGKSCRLRWINYLR 64

Query: 89  PGLKRGNYTNEENELICKLHQTHGNRWSTIAAKLPGRTDNEVKNYWNAHLKKQVKPKTES 148
           PGLKRGN+T EE + I  LHQ +GN+WS IA+  PGRTDNE+KN WN HLKK++  ++ S
Sbjct: 65  PGLKRGNFTKEEEDTIIHLHQAYGNKWSKIASNFPGRTDNEIKNVWNTHLKKRLVKRSIS 124

Query: 149 STKHEGKPKDLSLSHVYEAKTSKDFAEYCSSTFGILESSSCLSQQTSSSDDNFGTVINWR 208
           S+       D++   V    +S       SS+   +     +  +  + ++ FG ++  +
Sbjct: 125 SSS-----SDVTNHSVSSTSSS-------SSSISSVLQDVIIKSERPNQEEEFGEILVEQ 184

Query: 209 ME-DYNIDQLQ-ISGYYDDFWTEPYVW--DHNETNAFSVDY 246
           M   + +D  Q +   +DD    P +   D  +T+  S D+
Sbjct: 185 MACGFEVDAPQSLECLFDDSQVPPPISKPDSLQTHGKSSDH 213

BLAST of Csa6G121970 vs. TAIR10
Match: AT3G23250.1 (AT3G23250.1 myb domain protein 15)

HSP 1 Score: 174.5 bits (441), Expect = 9.0e-44
Identity = 106/252 (42.06%), Postives = 144/252 (57.14%), Query Frame = 1

Query: 27  MVRAPVVDKDGVKRGAWSLEEDQKLRAYIEKYGPWKWREVPRLAGLMRCGKSCRLRWLNY 86
           M RAP  +K G+KRG W+ EEDQ L ++I  +G   WR +P+ AGL+RCGKSCRLRW+NY
Sbjct: 1   MGRAPCCEKMGLKRGPWTPEEDQILVSFILNHGHSNWRALPKQAGLLRCGKSCRLRWMNY 60

Query: 87  LRPGLKRGNYTNEENELICKLHQTHGNRWSTIAAKLPGRTDNEVKNYWNAHLKKQV---- 146
           L+P +KRGN+T EE + I  LHQ  GNRWS IAAKLPGRTDNE+KN W+ HLKK++    
Sbjct: 61  LKPDIKRGNFTKEEEDAIISLHQILGNRWSAIAAKLPGRTDNEIKNVWHTHLKKRLEDYQ 120

Query: 147 --KPKTESSTKHEGKPKDLS-LSHVYEAKTSKDFAEYCS----STFGILESSSCLSQQTS 206
             KPKT S+ K   KPK  S ++     ++  + A+  +    S F    S+S +S  T 
Sbjct: 121 PAKPKT-SNKKKGTKPKSESVITSSNSTRSESELADSSNPSGESLFSTSPSTSEVSSMTL 180

Query: 207 SSDDNFGTVINWRMED---YNIDQLQIS------GYYDDFWTEPYVWDHNETNAFSVDYG 258
            S D +   IN   +      IDQ  +S         + FW E  ++  +E N  S D  
Sbjct: 181 ISHDGYSNEINMDNKPGDISTIDQECVSFETFGADIDESFWKET-LYSQDEHNYVSNDLE 240

BLAST of Csa6G121970 vs. TAIR10
Match: AT2G16720.1 (AT2G16720.1 myb domain protein 7)

HSP 1 Score: 173.7 bits (439), Expect = 1.5e-43
Identity = 77/146 (52.74%), Postives = 106/146 (72.60%), Query Frame = 1

Query: 27  MVRAPVVDKDGVKRGAWSLEEDQKLRAYIEKYGPWKWREVPRLAGLMRCGKSCRLRWLNY 86
           M R+P  +K+ + +GAW+ EED++L +YI+ +G   WR +PR AGL+RCGKSCRLRW+NY
Sbjct: 1   MGRSPCCEKEHMNKGAWTKEEDERLVSYIKSHGEGCWRSLPRAAGLLRCGKSCRLRWINY 60

Query: 87  LRPGLKRGNYTNEENELICKLHQTHGNRWSTIAAKLPGRTDNEVKNYWNAHLKKQVKPKT 146
           LRP LKRGN+T++E+ELI KLH   GN+WS IAA+LPGRTDNE+KNYWN H+K+++  K 
Sbjct: 61  LRPDLKRGNFTHDEDELIIKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLLSKG 120

Query: 147 ESSTKHEGKPKDLSLSHVYEAKTSKD 173
                H G    ++ + + + K +KD
Sbjct: 121 IDPATHRG----INEAKISDLKKTKD 142

BLAST of Csa6G121970 vs. TAIR10
Match: AT1G79180.1 (AT1G79180.1 myb domain protein 63)

HSP 1 Score: 171.4 bits (433), Expect = 7.6e-43
Identity = 80/147 (54.42%), Postives = 103/147 (70.07%), Query Frame = 1

Query: 29  RAPVVDKDGVKRGAWSLEEDQKLRAYIEKYGPWKWREVPRLAGLMRCGKSCRLRWLNYLR 88
           RAP  DK  VKRG WS EED KL ++I+K+G   WR +P+ +GL+RCGKSCRLRW+NYLR
Sbjct: 5   RAPCCDKTKVKRGPWSPEEDIKLISFIQKFGHENWRSLPKQSGLLRCGKSCRLRWINYLR 64

Query: 89  PGLKRGNYTNEENELICKLHQTHGNRWSTIAAKLPGRTDNEVKNYWNAHLKKQV------ 148
           P LKRGN+T+EE E I KLH  +GN+WS IA++LPGRTDNE+KN W+ HLKK++      
Sbjct: 65  PDLKRGNFTSEEEETIIKLHHNYGNKWSKIASQLPGRTDNEIKNVWHTHLKKRLAQSSGT 124

Query: 149 --KPKTESSTKHEGKPKDLSLSHVYEA 168
             +P +  S+    + KD   SHV ++
Sbjct: 125 ADEPASPCSSDSVSRGKDDKSSHVEDS 151

BLAST of Csa6G121970 vs. TAIR10
Match: AT4G38620.1 (AT4G38620.1 myb domain protein 4)

HSP 1 Score: 170.2 bits (430), Expect = 1.7e-42
Identity = 77/143 (53.85%), Postives = 99/143 (69.23%), Query Frame = 1

Query: 27  MVRAPVVDKDGVKRGAWSLEEDQKLRAYIEKYGPWKWREVPRLAGLMRCGKSCRLRWLNY 86
           M R+P  +K    +GAW+ EED++L AYI+ +G   WR +P+ AGL+RCGKSCRLRW+NY
Sbjct: 1   MGRSPCCEKAHTNKGAWTKEEDERLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 87  LRPGLKRGNYTNEENELICKLHQTHGNRWSTIAAKLPGRTDNEVKNYWNAHLKKQV---- 146
           LRP LKRGN+T EE+ELI KLH   GN+WS IA +LPGRTDNE+KNYWN H+++++    
Sbjct: 61  LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLINRG 120

Query: 147 ------KPKTESSTKHEGKPKDL 160
                 +P  ESS   + KP  L
Sbjct: 121 IDPTSHRPIQESSASQDSKPTQL 143

BLAST of Csa6G121970 vs. NCBI nr
Match: gi|778712704|ref|XP_004140052.2| (PREDICTED: transcription repressor MYB6-like [Cucumis sativus])

HSP 1 Score: 576.2 bits (1484), Expect = 2.9e-161
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 1

Query: 1   MSYFHSLLSLSLSLCMCVSQTNNNNIMVRAPVVDKDGVKRGAWSLEEDQKLRAYIEKYGP 60
           MSYFHSLLSLSLSLCMCVSQTNNNNIMVRAPVVDKDGVKRGAWSLEEDQKLRAYIEKYGP
Sbjct: 1   MSYFHSLLSLSLSLCMCVSQTNNNNIMVRAPVVDKDGVKRGAWSLEEDQKLRAYIEKYGP 60

Query: 61  WKWREVPRLAGLMRCGKSCRLRWLNYLRPGLKRGNYTNEENELICKLHQTHGNRWSTIAA 120
           WKWREVPRLAGLMRCGKSCRLRWLNYLRPGLKRGNYTNEENELICKLHQTHGNRWSTIAA
Sbjct: 61  WKWREVPRLAGLMRCGKSCRLRWLNYLRPGLKRGNYTNEENELICKLHQTHGNRWSTIAA 120

Query: 121 KLPGRTDNEVKNYWNAHLKKQVKPKTESSTKHEGKPKDLSLSHVYEAKTSKDFAEYCSST 180
           KLPGRTDNEVKNYWNAHLKKQVKPKTESSTKHEGKPKDLSLSHVYEAKTSKDFAEYCSST
Sbjct: 121 KLPGRTDNEVKNYWNAHLKKQVKPKTESSTKHEGKPKDLSLSHVYEAKTSKDFAEYCSST 180

Query: 181 FGILESSSCLSQQTSSSDDNFGTVINWRMEDYNIDQLQISGYYDDFWTEPYVWDHNETNA 240
           FGILESSSCLSQQTSSSDDNFGTVINWRMEDYNIDQLQISGYYDDFWTEPYVWDHNETNA
Sbjct: 181 FGILESSSCLSQQTSSSDDNFGTVINWRMEDYNIDQLQISGYYDDFWTEPYVWDHNETNA 240

Query: 241 FSVDYGIEMFSPQQQYETAYDHNYCDLFC 270
           FSVDYGIEMFSPQQQYETAYDHNYCDLFC
Sbjct: 241 FSVDYGIEMFSPQQQYETAYDHNYCDLFC 269

BLAST of Csa6G121970 vs. NCBI nr
Match: gi|659094749|ref|XP_008448223.1| (PREDICTED: transcription repressor MYB6-like [Cucumis melo])

HSP 1 Score: 528.9 bits (1361), Expect = 5.3e-147
Identity = 249/272 (91.54%), Postives = 257/272 (94.49%), Query Frame = 1

Query: 1   MSYFHSLLSLSLSLC--MCVSQTNNNNIMVRAPVVDKDGVKRGAWSLEEDQKLRAYIEKY 60
           MSYFHS+LSLSLSLC  MCVSQ  NNNIMVRAPVVDKDGVKRGAWSLEEDQKLRAYIEKY
Sbjct: 1   MSYFHSVLSLSLSLCLCMCVSQRRNNNIMVRAPVVDKDGVKRGAWSLEEDQKLRAYIEKY 60

Query: 61  GPWKWREVPRLAGLMRCGKSCRLRWLNYLRPGLKRGNYTNEENELICKLHQTHGNRWSTI 120
           GPWKWREVP LAGLMRCGKSCRLRWLNYLRPGLKRGNYTNEENELICKLHQ +GNRWSTI
Sbjct: 61  GPWKWREVPTLAGLMRCGKSCRLRWLNYLRPGLKRGNYTNEENELICKLHQKYGNRWSTI 120

Query: 121 AAKLPGRTDNEVKNYWNAHLKKQVKPKTESST-KHEGKPKDLSLSHVYEAKTSKDFAEYC 180
           AAKLPGRTDNEVKN+WNAHLKKQVKPKTESST KHEGKPK+L LSHVYEAKTSKDFAEYC
Sbjct: 121 AAKLPGRTDNEVKNHWNAHLKKQVKPKTESSTIKHEGKPKELRLSHVYEAKTSKDFAEYC 180

Query: 181 SSTFGILESSSCLSQQTSSSDDNFGTVINWRMEDYNIDQLQISGYYDDFWTEPYVWDHNE 240
           SSTFGI+ESSSC SQ+TSSSDDNFGT INW MEDYNIDQLQI GYYD+FWTEPYVWDHN+
Sbjct: 181 SSTFGIVESSSCFSQETSSSDDNFGTEINWGMEDYNIDQLQICGYYDNFWTEPYVWDHNQ 240

Query: 241 TNAFSVDYGIEMFSPQQQYETAYDHNYCDLFC 270
           TNAFS DYGI MFSPQQQYET YDHNYCDLFC
Sbjct: 241 TNAFSEDYGIRMFSPQQQYETTYDHNYCDLFC 272

BLAST of Csa6G121970 vs. NCBI nr
Match: gi|661884587|emb|CDP11892.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 213.8 bits (543), Expect = 3.8e-52
Identity = 104/221 (47.06%), Postives = 143/221 (64.71%), Query Frame = 1

Query: 27  MVRAPVVDKDGVKRGAWSLEEDQKLRAYIEKYGPWKWREVPRLAGLMRCGKSCRLRWLNY 86
           MVRAP VDK+GVK+GAWS EED KLRAY+ +YG W WR++P+ AGL RCGKSCRLRW+NY
Sbjct: 1   MVRAPSVDKNGVKKGAWSEEEDNKLRAYVLRYGHWNWRQLPKFAGLSRCGKSCRLRWMNY 60

Query: 87  LRPGLKRGNYTNEENELICKLHQTHGNRWSTIAAKLPGRTDNEVKNYWNAHLKKQVKPK- 146
           L+PG++RG YT EE +LI KLH+ +GNRWS IAAKLPGRTDN++KN+W+ HLKK+ K   
Sbjct: 61  LKPGVRRGKYTIEEEDLIIKLHEQYGNRWSAIAAKLPGRTDNDIKNHWHTHLKKRNKQTQ 120

Query: 147 -TESSTKHEGKPKDLSLSHVYEAKTSKDFAEYCSSTFGILESSSCLSQQTS-SSDDNFGT 206
            +E S   +   ++   S +  + +S D            +S    +  +S S D     
Sbjct: 121 LSERSQNMDDADQNEQSSAMSTSGSSTDQKREMDPNASAADSLDAYTDISSLSCDSTLFD 180

Query: 207 VINWRMEDYNIDQLQISGYYDDFWTEPYVWDHNETNAFSVD 245
            ++W  +D N     ++  ++ FWTEP+  D + +N  SVD
Sbjct: 181 CVDWVADDSNSSVESLTEPFESFWTEPFALDTSFSNYISVD 221

BLAST of Csa6G121970 vs. NCBI nr
Match: gi|743908097|ref|XP_011047494.1| (PREDICTED: myb-related protein Myb4-like [Populus euphratica])

HSP 1 Score: 213.4 bits (542), Expect = 4.9e-52
Identity = 118/231 (51.08%), Postives = 148/231 (64.07%), Query Frame = 1

Query: 27  MVRAPVVDKDGVKRGAWSLEEDQKLRAYIEKYGPWKWREVPRLAGLMRCGKSCRLRWLNY 86
           MVRAP  DK+G+K+GAWS EED KLR +IEKYG W WRE+P+ AGL RCGKSCRLRW+NY
Sbjct: 1   MVRAPYFDKNGIKKGAWSQEEDDKLREHIEKYGLWNWREIPKFAGLSRCGKSCRLRWMNY 60

Query: 87  LRPGLKRGNYTNEENELICKLHQTHGNRWSTIAAKLPGRTDNEVKNYWNAHLKKQ-VKPK 146
           LRP +K GNYT EE +LI KLH+ HGN+WS IAAKLPGRTDNEVKNYW+AHLKK+ VK +
Sbjct: 61  LRPDVKHGNYTKEEEDLILKLHEKHGNKWSIIAAKLPGRTDNEVKNYWHAHLKKRTVKNQ 120

Query: 147 TESSTKHE--GKPKDLSLSHVYEAKTSKDFAEYCSSTFGILESSSCLSQQTSSSD----- 206
              + K +  G   +   S + +   +K  A  C+ +  ILES+  LS +TS S+     
Sbjct: 121 NTLALKEKCSGFTSESEGSQMNKETEAKTVAS-CTPSNPILESTP-LSPETSCSELSNLS 180

Query: 207 --------DNFGTVINWRMEDYNIDQLQISGYYDDFWTEPYVWD--HNETN 240
                    + GT +N   ED             DFWTEP+V D  +N+ N
Sbjct: 181 TDFAPKLPVSAGTNLNNIAEDILPSVPTFDESIGDFWTEPFVADSAYNQDN 229

BLAST of Csa6G121970 vs. NCBI nr
Match: gi|734420998|gb|KHN41176.1| (Myb-related protein Myb4 [Glycine soja])

HSP 1 Score: 211.5 bits (537), Expect = 1.9e-51
Identity = 109/247 (44.13%), Postives = 159/247 (64.37%), Query Frame = 1

Query: 27  MVRAPVVDKDGVKRGAWSLEEDQKLRAYIEKYGPWKWREVPRLAGLMRCGKSCRLRWLNY 86
           MVRAP  DK+G+K+GAWS EED+KL AY++++G   WR++P+ AGL RCGKSCRLRWLNY
Sbjct: 1   MVRAPFYDKNGLKKGAWSREEDEKLTAYVKRHGHSNWRQLPKFAGLARCGKSCRLRWLNY 60

Query: 87  LRPGLKRGNYTNEENELICKLHQTHGNRWSTIAAKLPGRTDNEVKNYWNAHLKKQVKPKT 146
           LRP LK GNYT EE ++I KLHQ  GN+WS IA KLPGRTDNEVKNYW+ HLKK +K   
Sbjct: 61  LRPNLKHGNYTLEEEKIIIKLHQEFGNKWSLIAEKLPGRTDNEVKNYWHGHLKK-IKSNE 120

Query: 147 ESSTKHEGKPK---DLSLSHVYEA-KTSKDFAEYCSSTFGILESSSCLSQQTSSSDDNFG 206
            +++K + KP    +++ +  ++  K+   +A+       ILESS  +S++++S  DN+ 
Sbjct: 121 ITTSKLKSKPGYSIEVNSNETHQCEKSESPYADVGDDFPYILESSLAMSRESTSEGDNYS 180

Query: 207 --TVINWRMEDYNIDQ-------LQISGYYDDFWTEPYVWDHNETNAFSVDYGIEMFSPQ 261
             ++++    D ++ +       +    +  DFWTEP++ +   TN      GI +  P 
Sbjct: 181 LTSIVSLSTMDSSLSKEESVPPLVSYEEFSSDFWTEPFLTEDTFTNEICSGEGIALLIP- 240

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
MYB4_ARATH3.0e-4153.85Transcription repressor MYB4 OS=Arabidopsis thaliana GN=MYB4 PE=1 SV=1[more]
MYB1_MAIZE6.7e-4144.67Myb-related protein Zm1 OS=Zea mays PE=2 SV=1[more]
MYB32_ARATH8.7e-4153.02Transcription factor MYB32 OS=Arabidopsis thaliana GN=MYB32 PE=2 SV=1[more]
MYB1_HORVU4.3e-4052.17Myb-related protein Hv1 OS=Hordeum vulgare GN=MYB1 PE=2 SV=1[more]
MYB3_ARATH4.3e-4058.73Transcription factor MYB3 OS=Arabidopsis thaliana GN=MYB3 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0KAD1_CUCSA2.0e-161100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G121970 PE=4 SV=1[more]
A0A068UUA9_COFCA2.6e-5247.06Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00035177001 PE=4 SV=1[more]
A0A068UTL8_COFCA1.3e-5146.79Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00035175001 PE=4 SV=1[more]
A0A0B2S367_GLYSO1.3e-5144.13Myb-related protein Myb4 OS=Glycine soja GN=glysoja_017220 PE=4 SV=1[more]
B9INU4_POPTR2.9e-5151.34Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s14130g PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G12820.16.9e-4442.53 myb domain protein 10[more]
AT3G23250.19.0e-4442.06 myb domain protein 15[more]
AT2G16720.11.5e-4352.74 myb domain protein 7[more]
AT1G79180.17.6e-4354.42 myb domain protein 63[more]
AT4G38620.11.7e-4253.85 myb domain protein 4[more]
Match NameE-valueIdentityDescription
gi|778712704|ref|XP_004140052.2|2.9e-161100.00PREDICTED: transcription repressor MYB6-like [Cucumis sativus][more]
gi|659094749|ref|XP_008448223.1|5.3e-14791.54PREDICTED: transcription repressor MYB6-like [Cucumis melo][more]
gi|661884587|emb|CDP11892.1|3.8e-5247.06unnamed protein product [Coffea canephora][more]
gi|743908097|ref|XP_011047494.1|4.9e-5251.08PREDICTED: myb-related protein Myb4-like [Populus euphratica][more]
gi|734420998|gb|KHN41176.1|1.9e-5144.13Myb-related protein Myb4 [Glycine soja][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR009057Homeobox-like_sf
IPR017930Myb_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G121970.1Csa6G121970.1mRNA


Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 40..87
score: 9.8E-14coord: 93..138
score: 6.4
IPR001005SANT/Myb domainSMARTSM00717santcoord: 92..140
score: 3.5E-16coord: 39..89
score: 7.0
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 95..142
score: 6.2E-26coord: 41..94
score: 1.6
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 37..134
score: 8.78
IPR017930Myb domainPROFILEPS51294HTH_MYBcoord: 92..142
score: 19.247coord: 35..91
score: 24
NoneNo IPR availablePANTHERPTHR10641MYB-LIKE DNA-BINDING PROTEIN MYBcoord: 11..258
score: 2.7
NoneNo IPR availablePANTHERPTHR10641:SF541SUBFAMILY NOT NAMEDcoord: 11..258
score: 2.7