Csa6G107830 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAACATACAGAAAACAGTTTGGGAGACACATTACCATCACACACACAATTATACAAAATGATTCCAAGTTTACCTCCTCCAGTTAGTACTCCCGCGACGGAGACGCCCAAGAAAGAAGGAAGATACAAACTTGACTTCTCGTCCTCCGACGACAAATCCATATTCCCTAAATATTTTGCTTTGCAAAACTATAGCCCAAGACATCCCCAGCCAAGAACTGCACCCTTTCTACAGTATATACATGAAAGTTACCTTGAATTCAATGGCGAACACGGCCTCCTTCATCCATTTTCAAAATTCGAATCCGAAATCTCCGATTCTAACCCCAAACTCATCCACATAAGATGTACGGGCATCAACAAATATTGGGTTCGCAAATCATCCGACTCCAACCACATTGTACCCATTGCCACCAAGAAAGAAGACAACGTATCGAAATCGTCGTGCACTTTGTTCGAGCCAATCTATGATGCCAAATATAAGGCTTACCGCTTTCGTCACGTGCAACTCGGTTATGAGTTGTTTCGTGATAAAACGGACAGGTTATTGGCAAGGGAGAATGGTAGTCCAGATTCTGAACGGGAGGATGCATATGGTGTATTCACCAAAGTTATTGATTGGAATTCGTTATGTGTGTTCCCAAAACACGTGACCTTTAAAGGCTACAATGGCAAGTATTTGAGATTTGAGGGTAAGTATTTGCAAGTATCTGGAGAGCAAAATCATTCATCTCTTATCCATGAGATCTACCCTCAAAAGGATGGAAATCTTATGATCAAGAATATTAAGTCCGAAAGGTTTTGGATCCATGATCCTAATTGGATAGTAGCTACCGCGAGAGGTACGAATCTCATACTTAACTCCAACGGCAAAAGTTCCACATCCTTCTGTTTTTAAAATTCTAAAGATTACATGTATAAACACTTTGTTATCCATTGCTTACCAAATTTTCAAAGACACCAAGCCTAATTTTTCTTTTTAAAAAAACATACACTTTAAAATATCGTTTTCAGGGTAGAATTTAAAATTCATAAATTTTTTTAAAACTCATGATAGAAAATTGACAATAGTTTAATTTTCAACCAAACCAGAAAAAACTAAATAGTTACCGAATAATAATAAATTTAAAACAAAATTTTGACTTGTTCTTTCAACAGATATTATTAACTAAGATTAATATCTATTGATCAACTTATGAATGATATATCTCTAGTTTTGATATACCAATTTTGATTGATATTATTAACCAAAGTTTATCATTGATGAAGATCTTATCTGTGTGTGTGATCGTAGGTGTATGCGTCTATTCATAGTTGTTTACATGCTCATAATTTGTTATTATCTTTAATTATTATTAGTTTATCATATCAATAACTTAGAAATAATAGTATATAACATCACGTTGTTTACTAAAGTTACTATTTTCTTTTCATGTTCATTTGTTTTTTTTCTTCTTCTTTTTCAAGTTTTATCATTTTTATAGCACCATATCCAGAATGATAAATTTTATTTTAGTGATATATATTTTGAAATTTCTTTCTATCCATGATTAGGTTTGATGCTCATGTGCTATGAGGTCTATTATAGTTAGTTTATCATACCAATAAATTATAAATTATAATTTTCTAGTATATATTTATCGTTTTTTTTATTAGTAGCTGTTTGCATATTCATTTGTTATTAGGTTTCATTTATGTCTTATACTATTAAATACAAAAGGTCTATTAATAATATTTATATTTTCTATTTATCAATAATTATTATATTTTACTATTTTCTTTATATAGTATTTGATTTATCGTTAATAACTACGAATTTATATAAATAATATTGTGCTTAGTTTTCCACCCAAACGCTTATTTGCTATGAGATTTAATATCCAGATCATAAGGGGGAAATCATATATTGATGACATTTAAATTTGTGATAGATAGTTAACAATAATGTTGATGGATGGTAGGAATTATTGCAAATATAGCAATTAGATTCAAAATAATTAAGTACAGAACAACATTTAATTTTTTTTTACAAATATAACAAAAGCTGTCAAAGTCTATCGATAATAGAAGTCTAATATATATTACAAATATTTGTTTATCAGTTAAAGATTTTGCTATATTTATAATTTTTATAAATATTATTATATACTTAATTATTCGCTTAATTTTCACAAATGTAACAAAATTAAAAAGATATTTATGACCGTAACAAATAGCACAAGCCCATGTTCTAGATTTGCTATTGAATATTACGGAAGATTCATATTATTTCTCTTTCTTCTTCTATTTTGCGGTCTATTCAACTTCCCTTCCAAATTTATTCTTCTCTTTCAGAATTATTTTTTCTTCTATTTTTAAATGATTCATTTTTCTGTTTAAATTTTCTATTTTATTTTTCTGTTTTCAACGAGATTCTTTTAAACTACTTCATATTTCTCATATTCAAGAATATCGAGATCATTTAAATATCATTTTGACATAATCTAATGCGTCTATCATGCATGGTCCACGTGATCGTTTAAATTTAAAATCTTTTTTATCATTATTTAAATTGATCTAAAACAATCACGTTGACATGATCTAAACAATTGTTAACCATAGTTAACATGATCATTAGATTTGAAGTTTTTAACGATCATTTACATTGGCTACATGATAATCACTTACCATAATCGTTTGTCATGGTTAACACGATCGTTTAATATAGTTAACACAATCATTTTATTTGGAAGTATTTTTCTCTATCGTTAAAAAGAACTATACGATCGTGTACCATGAACAAAACGATAGTAGATTATTTGTTTAGACGGTAGTACATGATTGGTTAGAAGTAAATTACTCCCACACATGTGTGGTTGATTAATTGCGTGTTGAATATTGGAGCATTTTTGGTAATTTTCAGTGTGGGCTTCTGGACTTTTTCGACTTTTTCGATTTTAGAATTGTTGTATGGAGTGTAAATGTTTTAATGATTTATTATATTTTCAAAAAAAAATTTAATTTTTATTCTTAAAATTGTTACAGTTGTAATCACCTTCATTCCCAATAAAAACCAATATATGAATGTGATTATGGCTACAACATCAATGAGGTTTGACCTTTTCTTTCTTAATTAACATACCATTTTGGTATACTTCATCATTTGTCCAATTTTAATTCTTAATTTGTTAAATTGTAATAATAATTTGCAGGCTAGAAAATATAATAGGGCGGTATATATGTTTCTAAATCTTGTAGTAAAAATAATAGTAAATAATATCTTTTTAAAAAAGAACAGAAAATATAATCACTAATGAAGGGAAAATGATTAGAATGTTAAAGATGGCGATGTGCTGATGAATAATACCAATTTTTAATGCATATGTTCTATACGTTTTATAATTGTGTCCTCGAGTTCTAAAAATAACAGACATTAATGTAATTTAATGTAATTTAAGCTAAATTGTATAGTTTGATTGAACAGATGGGAATAGAGACGATCCGAACTTATTGTTTCAACCTGTGAGCCTCCACAACAACGTCGTGGCTCTTCGCAGCTTAGGAAACACTGCCTTCTGCGCTATTATATCCGTGGATGACCAGAAAAATTGTTTGAATGCTACTGAATCTGACCCTACTGAAGAAACCCAATTTGAAGTTTCAGAAGATTATATAATATATAGAAGAAAAATAGATATCAACATTCACTATAGGCTTGGAAATGGAAGGATTTATGGGGAGAGAGTTTGGTCAATGGCCAAAGGATATGCCATTAACAAAACCGAAGAACCTGAACAAATCGAATTCACTTTCTCTTTTGAAGACGAAAGGAACATGAAATGGACCAACATATTTGCTAAACAATTTGAATCCACTAAGTATTTTAATGCTGAGTTTCCTTTGATAAAAGACGGCGAAATTACTATAGGAAATGGTACTGCTCAATCAATCATATGGGGAGAAACTTATCGTAAAAAAAAAATTTTGATGTCTTGTGATACCACCATCACCGTACCTCCCATGTCGAAAGTGAAGGTCAATGTTGTCGTCAAACGGGGGTTTTGTGAAGTTCCTTTTTCGTATATGCATGCCACAACTAGCGCAAAACATAGCGTAATAATACCATACAGAGACGGAGTTTTCACTGACGGAGATTTCACCGGTGTTAATTCATACCAATTTCAGATAACGACTGATGAGGAAGCACTACCTATATGAATTAAAAGGCACGAATTATTGGCATTGTCTTGTGTGTTTTAGTCCCATATGTGTGTGTAGTAATAAAGAATAATGTGGTTCAACCACACACCTTTTATATCCTTCATTTACTTAAAGTTTGTCATTTGTGTGTCCTTATGTTTGGAGGGTGTTTGTGATTCGTGTGTTACATATATTTGAAGTTTAATAATAATGACT ATGATTCCAAGTTTACCTCCTCCAGTTAGTACTCCCGCGACGGAGACGCCCAAGAAAGAAGGAAGATACAAACTTGACTTCTCGTCCTCCGACGACAAATCCATATTCCCTAAATATTTTGCTTTGCAAAACTATAGCCCAAGACATCCCCAGCCAAGAACTGCACCCTTTCTACAGTATATACATGAAAGTTACCTTGAATTCAATGGCGAACACGGCCTCCTTCATCCATTTTCAAAATTCGAATCCGAAATCTCCGATTCTAACCCCAAACTCATCCACATAAGATGTACGGGCATCAACAAATATTGGGTTCGCAAATCATCCGACTCCAACCACATTGTACCCATTGCCACCAAGAAAGAAGACAACGTATCGAAATCGTCGTGCACTTTGTTCGAGCCAATCTATGATGCCAAATATAAGGCTTACCGCTTTCGTCACGTGCAACTCGGTTATGAGTTGTTTCGTGATAAAACGGACAGGTTATTGGCAAGGGAGAATGGTAGTCCAGATTCTGAACGGGAGGATGCATATGGTGTATTCACCAAAGTTATTGATTGGAATTCGTTATGTGTGTTCCCAAAACACGTGACCTTTAAAGGCTACAATGGCAAGTATTTGAGATTTGAGGGTAAGTATTTGCAAGTATCTGGAGAGCAAAATCATTCATCTCTTATCCATGAGATCTACCCTCAAAAGGATGGAAATCTTATGATCAAGAATATTAAGTCCGAAAGGTTTTGGATCCATGATCCTAATTGGATAGTAGCTACCGCGAGAGATGGGAATAGAGACGATCCGAACTTATTGTTTCAACCTGTGAGCCTCCACAACAACGTCGTGGCTCTTCGCAGCTTAGGAAACACTGCCTTCTGCGCTATTATATCCGTGGATGACCAGAAAAATTGTTTGAATGCTACTGAATCTGACCCTACTGAAGAAACCCAATTTGAAGTTTCAGAAGATTATATAATATATAGAAGAAAAATAGATATCAACATTCACTATAGGCTTGGAAATGGAAGGATTTATGGGGAGAGAGTTTGGTCAATGGCCAAAGGATATGCCATTAACAAAACCGAAGAACCTGAACAAATCGAATTCACTTTCTCTTTTGAAGACGAAAGGAACATGAAATGGACCAACATATTTGCTAAACAATTTGAATCCACTAAGTATTTTAATGCTGAGTTTCCTTTGATAAAAGACGGCGAAATTACTATAGGAAATGGTACTGCTCAATCAATCATATGGGGAGAAACTTATCGTAAAAAAAAAATTTTGATGTCTTGTGATACCACCATCACCGTACCTCCCATGTCGAAAGTGAAGGTCAATGTTGTCGTCAAACGGGGGTTTTGTGAAGTTCCTTTTTCGTATATGCATGCCACAACTAGCGCAAAACATAGCGTAATAATACCATACAGAGACGGAGTTTTCACTGACGGAGATTTCACCGGTGTTAATTCATACCAATTTCAGATAACGACTGATGAGGAAGCACTACCTATATGA ATGATTCCAAGTTTACCTCCTCCAGTTAGTACTCCCGCGACGGAGACGCCCAAGAAAGAAGGAAGATACAAACTTGACTTCTCGTCCTCCGACGACAAATCCATATTCCCTAAATATTTTGCTTTGCAAAACTATAGCCCAAGACATCCCCAGCCAAGAACTGCACCCTTTCTACAGTATATACATGAAAGTTACCTTGAATTCAATGGCGAACACGGCCTCCTTCATCCATTTTCAAAATTCGAATCCGAAATCTCCGATTCTAACCCCAAACTCATCCACATAAGATGTACGGGCATCAACAAATATTGGGTTCGCAAATCATCCGACTCCAACCACATTGTACCCATTGCCACCAAGAAAGAAGACAACGTATCGAAATCGTCGTGCACTTTGTTCGAGCCAATCTATGATGCCAAATATAAGGCTTACCGCTTTCGTCACGTGCAACTCGGTTATGAGTTGTTTCGTGATAAAACGGACAGGTTATTGGCAAGGGAGAATGGTAGTCCAGATTCTGAACGGGAGGATGCATATGGTGTATTCACCAAAGTTATTGATTGGAATTCGTTATGTGTGTTCCCAAAACACGTGACCTTTAAAGGCTACAATGGCAAGTATTTGAGATTTGAGGGTAAGTATTTGCAAGTATCTGGAGAGCAAAATCATTCATCTCTTATCCATGAGATCTACCCTCAAAAGGATGGAAATCTTATGATCAAGAATATTAAGTCCGAAAGGTTTTGGATCCATGATCCTAATTGGATAGTAGCTACCGCGAGAGATGGGAATAGAGACGATCCGAACTTATTGTTTCAACCTGTGAGCCTCCACAACAACGTCGTGGCTCTTCGCAGCTTAGGAAACACTGCCTTCTGCGCTATTATATCCGTGGATGACCAGAAAAATTGTTTGAATGCTACTGAATCTGACCCTACTGAAGAAACCCAATTTGAAGTTTCAGAAGATTATATAATATATAGAAGAAAAATAGATATCAACATTCACTATAGGCTTGGAAATGGAAGGATTTATGGGGAGAGAGTTTGGTCAATGGCCAAAGGATATGCCATTAACAAAACCGAAGAACCTGAACAAATCGAATTCACTTTCTCTTTTGAAGACGAAAGGAACATGAAATGGACCAACATATTTGCTAAACAATTTGAATCCACTAAGTATTTTAATGCTGAGTTTCCTTTGATAAAAGACGGCGAAATTACTATAGGAAATGGTACTGCTCAATCAATCATATGGGGAGAAACTTATCGTAAAAAAAAAATTTTGATGTCTTGTGATACCACCATCACCGTACCTCCCATGTCGAAAGTGAAGGTCAATGTTGTCGTCAAACGGGGGTTTTGTGAAGTTCCTTTTTCGTATATGCATGCCACAACTAGCGCAAAACATAGCGTAATAATACCATACAGAGACGGAGTTTTCACTGACGGAGATTTCACCGGTGTTAATTCATACCAATTTCAGATAACGACTGATGAGGAAGCACTACCTATATGA MIPSLPPPVSTPATETPKKEGRYKLDFSSSDDKSIFPKYFALQNYSPRHPQPRTAPFLQYIHESYLEFNGEHGLLHPFSKFESEISDSNPKLIHIRCTGINKYWVRKSSDSNHIVPIATKKEDNVSKSSCTLFEPIYDAKYKAYRFRHVQLGYELFRDKTDRLLARENGSPDSEREDAYGVFTKVIDWNSLCVFPKHVTFKGYNGKYLRFEGKYLQVSGEQNHSSLIHEIYPQKDGNLMIKNIKSERFWIHDPNWIVATARDGNRDDPNLLFQPVSLHNNVVALRSLGNTAFCAIISVDDQKNCLNATESDPTEETQFEVSEDYIIYRRKIDINIHYRLGNGRIYGERVWSMAKGYAINKTEEPEQIEFTFSFEDERNMKWTNIFAKQFESTKYFNAEFPLIKDGEITIGNGTAQSIIWGETYRKKKILMSCDTTITVPPMSKVKVNVVVKRGFCEVPFSYMHATTSAKHSVIIPYRDGVFTDGDFTGVNSYQFQITTDEEALPI*
BLAST of Csa6G107830 vs. TrEMBL
Match: A0A0A0KAP4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G107830 PE=4 SV=1) HSP 1 Score: 1047.0 bits (2706), Expect = 7.6e-303 Identity = 505/505 (100.00%), Postives = 505/505 (100.00%), Query Frame = 1
BLAST of Csa6G107830 vs. TrEMBL
Match: A0A0A0KFN1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G107320 PE=4 SV=1) HSP 1 Score: 782.3 bits (2019), Expect = 3.5e-223 Identity = 390/508 (76.77%), Postives = 430/508 (84.65%), Query Frame = 1
BLAST of Csa6G107830 vs. TrEMBL
Match: A0A0A0K983_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G085120 PE=4 SV=1) HSP 1 Score: 285.0 bits (728), Expect = 1.7e-73 Identity = 171/494 (34.62%), Postives = 266/494 (53.85%), Query Frame = 1
BLAST of Csa6G107830 vs. TrEMBL
Match: A0A0A0KBV4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G085110 PE=4 SV=1) HSP 1 Score: 275.0 bits (702), Expect = 1.8e-70 Identity = 166/485 (34.23%), Postives = 254/485 (52.37%), Query Frame = 1
BLAST of Csa6G107830 vs. TrEMBL
Match: A0A0A0KEX2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G084600 PE=4 SV=1) HSP 1 Score: 266.5 bits (680), Expect = 6.4e-68 Identity = 171/487 (35.11%), Postives = 256/487 (52.57%), Query Frame = 1
BLAST of Csa6G107830 vs. NCBI nr
Match: gi|778712157|ref|XP_004140503.2| (PREDICTED: uncharacterized protein LOC101208220 [Cucumis sativus]) HSP 1 Score: 1047.0 bits (2706), Expect = 1.1e-302 Identity = 505/505 (100.00%), Postives = 505/505 (100.00%), Query Frame = 1
BLAST of Csa6G107830 vs. NCBI nr
Match: gi|449445487|ref|XP_004140504.1| (PREDICTED: uncharacterized protein LOC101208463 [Cucumis sativus]) HSP 1 Score: 782.3 bits (2019), Expect = 5.0e-223 Identity = 390/508 (76.77%), Postives = 430/508 (84.65%), Query Frame = 1
BLAST of Csa6G107830 vs. NCBI nr
Match: gi|659120424|ref|XP_008460186.1| (PREDICTED: uncharacterized protein LOC103499072 [Cucumis melo]) HSP 1 Score: 407.1 bits (1045), Expect = 4.4e-110 Identity = 203/291 (69.76%), Postives = 235/291 (80.76%), Query Frame = 1
BLAST of Csa6G107830 vs. NCBI nr
Match: gi|659120440|ref|XP_008460195.1| (PREDICTED: uncharacterized protein LOC103499080 [Cucumis melo]) HSP 1 Score: 285.4 bits (729), Expect = 1.9e-73 Identity = 171/494 (34.62%), Postives = 269/494 (54.45%), Query Frame = 1
BLAST of Csa6G107830 vs. NCBI nr
Match: gi|778722042|ref|XP_004140683.2| (PREDICTED: uncharacterized protein LOC101212952 [Cucumis sativus]) HSP 1 Score: 285.0 bits (728), Expect = 2.5e-73 Identity = 171/494 (34.62%), Postives = 266/494 (53.85%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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